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Reconstruction of symmetry-related molecules from protein data bank (PDB) files (1994)

Hooft, R. W. W. ; Sander, C. ; Vriend, G.

Copenhagen : International Union of Crystallography (IUCr)

Applied crystallography online 27 (1994), S. 1006-1009

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ISSN: 1600-5767

Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001

Topics: Geosciences , Physics

Notes: Many natural proteins are active as multimers. Crystallographic protein databases, however, generally store only part of the native multimer, the asymmetric unit, along with symmetry information. As a result of inaccuracies in the data, it is not always possible to reconstruct the native multimer. Here, a set of methods is presented that are designed to cope with inconsistencies in symmetry information. Applications include the validation of Protein Data Bank entries and the automatic generation of symmetry contacts for inspection and analysis.

Type of Medium: Electronic Resource

URL: http://dx.doi.org/10.1107/S0021889894007764

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