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  • Articles: DFG German National Licenses  (5)
  • RNA polymerase  (2)
  • Aprotic solvent  (1)
  • Calpain  (1)
  • Effect of silica  (1)
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  • Articles: DFG German National Licenses  (5)
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  • 1
    ISSN: 0014-5793
    Keywords: Calpain ; Human calpastatin ; Structure in solution ; ^1H NMR
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Journal of Molecular Biology 235 (1994), S. 405-413 
    ISSN: 0022-2836
    Keywords: RNA polymerase ; protein-protein contact ; sigma subunit ; transcription factor ; transcription regulation
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1617-4623
    Keywords: Phosphate regulon ; RNA polymerase ; σ70 ; Region 4.2 ; PhoB
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Transcription of the genes belonging to the phosphate (pho) regulon inEscherichia coli requires the specific activator protein PhoB, in addition to RNA polymerase containing the major sigma factor, σ70, which is encoded byrpoD. We previously isolated two mutant σ70s(D570G and E575K) that were specifically defective in transcribing thepho genes. The mutated sites were located near and within the first helix of the helix-turn-helix (HTH) motif of region 4.2 of σ70. To study further the role of the first helix of the HTH motif of σ70 in transcriptional activation by PhoB, we made a series ofrpoD mutations that alter the motif and purified the mutant σ70 proteins. RNA polymerases containing the mutant σ70s Y571A, T572L, V576T, K578E and F580V showed reduced in vitro transcription from thepstS promoter, a representativepho promoter, in the presence of PhoB, whereas RNA polymerase containing another mutant σ70 (E574 K) showed enhanced transcription from the promoter. Transcription from the activator-independenttac promoter and thepBR-P4 promoter, which is independent of PhoB and requires cAMP-CRP (cAMP receptor protein) for transcription, was affected at most only marginally by these σ70 mutations. These results provide further evidence that the first helix plays an important role in the specific interaction between RNA polymerase and PhoB protein bound to thepho promoters in transcriptional activation.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1435-1536
    Keywords: Aprotic solvent ; reentrant swelling phenomenon ; reentrant-convex swelling phenomenon ; solubility parameter ; Kirkwood-Buff parameter
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract The swelling volume of poly(N-isopropylacrylamide) (PIPAAm) gel in aprotic solvents (acetonitrile (AcN)-, tetrahydrofuran (THF)-, 1,4-dioxane (DO)- and dimethylsulfoxide (DMSO))-water mixtures was measured at 25°C. The gel swollen in water shrank first and then reswelled with addition of the aprotic solvents. At an intermediate mole fraction (XDMSO) range of DMSO-water mixtures, the gel demonstrated a “reentrant” swelling phenomenon the hydrated gel shrank first on addition of a small amount of solvent, showed a typical wide reentrant transition, and gradually reswelled in the range near pure solvent. On the other hand, the gels in AcN-, THF-, and DO-water mixtures demonstrated a “reentrant-convex” swelling phenomenon: the gels reswelled after a reentrant phase transition in low Xorg (XAcN, XTHF and XDO), showed a maximum swelling in the intermediate Xorg region, and shrank again gradually in the high Xorg region. Such a swelling behavior of the gel was interpreted by correlating with solution properties of the aqueous aprotic solvent mixtures. The strength of hydrogen bonding around amide groups of the homopolymer was examined in pure solvents (water, THF, and DMSO) and in all proportion of aqueous THF to observe the relation with swelling behavior of gel by spectrum analysis of the amide I and II bands of Fourier Transform Infrared Spectroscopy (FT-IR). The swelling properties of gels in solvents and the aqueous mixtures were well correlated with the peak shifts of amide groups of the homopolymer.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1612-1112
    Keywords: Liquid chromatography ; Reversed-phase chromatography ; Single-stranded oligo-DNAs ; Effect of silica ; Effect of the carbon content
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary A reversed-phase liquid chromatographic (RPLC) column, with which large oligodeoxynucleotides (oligo-DNAs) can be separated in well-resolved peaks, has been developed. The column contains only specially selected silica bonded with monochlorodimethyloctadecylsilane. The carbon content of the column packing is the predominant factor to achieve good results. With this column several mixtures containing different large oligo-DNAs could be separated with excellent resolution.
    Type of Medium: Electronic Resource
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