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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 72 (1986), S. 337-345 
    ISSN: 1432-2242
    Keywords: Cucumber ; Ribosomal DNA ; Heterogeneity ; R-loops ; Plant gene structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Restriction and hybridization analysis of cucumber native ribosomal (r) DNA purified from actinomycin-D/CsCl gradients suggested that the repeat units were heterogeneous in both length and sequence. Several full length rDNA repeat units were cloned and five are described which account for all the EcoR I and Xba I fragments present in native DNA. One of a number of BamH I sites found in the clones is not found in a proportion of native rDNA because of base modification. Restriction maps are described for the representative clones and aligned with R-loop maps obtained from electron microscope analysis of each type of repeat unit hybridized under R-loop conditions to pure 18S and 25S rRNAs. The major heterogeneity is explained by differences in length of the external spacer region and by a proportion of the repeat units showing a restriction fragment length polymorphism on EcoR I digestion. The regions coding for 18S and 25S rRNA are uninterrupted and highly conserved.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-2242
    Keywords: Key words Perennial ryegrass (Lolium perenne)  ; Cytoplasmic male sterility  ;  Mitochondrial DNA  ; atp9  ;  Chimaeric open reading frame
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The most striking difference between the mtDNAs of the fertile L. perenne line LPSB21 and the male-sterile line CMS9B290, is the presence in the former and the absence in the latter of a 5.6-kb HindIII fragment. This difference between fertile and sterile lines was the starting point for a detailed molecular analysis of the mitochondrial genome in the region spanning the 5.6-kb HindIII fragment in fertile L. perenne and the corresponding region in CMS9B290. Restriction mapping and Southern-blot analyses indicated that rearrangement of the mitochondrial genome consistent with a deletion/insertion event had occurred in the sterile line. Nucleotide-sequence analysis of the rearranged region in CMS9B290 revealed the presence of (1) a novel chimaeric gene, orf-C9, comprising the first six codons of atp9 fused to a further 118 codons of an unknown sequence and (2) a truncated version of an open reading frame, orf-L , originally identified in LPSB21 mtDNA. Northern-blot analysis confirmed the absence of orf-L transcripts and the presence of orf-C9 transcripts in the mtRNA of CMS9B290.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-2242
    Keywords: Organelle inheritance ; Chloroplast DNA ; Mitochondrial DNA ; Festuca pratensis-Lolium perenne hybrids
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Organelle inheritance in intergeneric hybrids of Festuca pratensis and Lolium perenne was investigated by restriction enzyme and Southern blot analyses of chloroplast DNA (cpDNA) and mitochondrial DNA (mtDNA). All F1 hybrids exhibited maternal inheritance of both cpDNA and mtDNA. However, examination of backcross hybrids, obtained by backcrossing the intergeneric F1 hybrids to L. Perenne, indicated that both uniparental maternal organelle inheritance and uniparental paternal organelle inheritance can occur in different backcross hybrids.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 76 (1988), S. 673-680 
    ISSN: 1432-2242
    Keywords: Melon ; Ribosomal DNA ; R-loops ; Heteroduplex analysis ; 17-25S spacer sequence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Restriction enzyme and hybridization analysis of melon nuclear DNA suggests a homogenous rDNA population with a repeat unit of 10.2 kb. Several full length Hind III rDNA repeat units were cloned and one of these is described in detail. The regions coding for 25S, 17S and 5.8S rRNAs were located by crossed-contact hybridization and R-loop mapping. Introns were not observed. The nucleotide sequence of the internal transcribed spacer and flanking regions was determined and compared with the corresponding region from rice rDNA by dot matrix analysis. In addition, the extent of gross sequence homology between cloned melon and pea rDNA units was determined by heteroduplex mapping.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1432-2242
    Keywords: Diagnostic probe ; Mitochondrial DNA (mtDNA) ; Cytoplasmic male sterility (CMS) ; Lolium perenne
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Analysis of reciprocal crosses between nonrestoring fertile genotypes and restored male-sterile genotypes of Lolium perenne confirmed the cytoplasmic nature of the sterility trait. This prompted a search for a molecular probe that could be used to distinguish between fertile and cytoplasmic male-sterile (CMS) cytoplasms. We describe the identification and cloning of a 4.5-kb BamHI-HindIII restriction fragment from the mtDNA of the CMS line. The cloned fragment (pCMS45) failed to hybridise to sequences in the mtDNA of fertile lines and was thus capable of unambiguously distinguishing between fertile and CMS cytoplasms. The use of pCMS45 as a diagnostic probe provided a simple test for positive identification of young non-flowering plants carrying the CMS cytoplasm and also permitted confirmation at the molecular level of the maternal transmission of the CMS trait suggested by the genetic data.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1432-2242
    Keywords: Perennial ryegrass (Lolium perenne) ; Cytoplasmic male sterility ; Mitochondrial DNA ; atp9 ; Chimaeric open reading frame
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The most striking difference between the mtDNAs of the fertile L. perenne line LPSB21 and the male-sterile line CMS9B290, is the presence in the former and the absence in the latter of a 5.6-kb HindIII fragment. This difference between fertile and sterile lines was the starting point for a detailed molecular analysis of the mitochondrial genome in the region spanning the 5.6-kb HindIII fragment in fertile L. perenne and the corresponding region in CMS9B290. Restriction mapping and Southern-blot analyses indicated that rearrangement of the mitochondrial genome consistent with a deletion/insertion event had occurred in the sterile line. Nucleotide-sequence analysis of the rearranged region in CMS9B290 revealed the presence of (1) a novel chimaeric gene, orf-C9, comprising the first six codons of atp9 fused to a further 118 codons of an unknown sequence and (2) a truncated version of an open reading frame, orf-L, originally identified in LPSB21 mtDNA. Northern-blot analysis confirmed the absence of orf-L transcripts and the presence of orf-C9 transcripts in the mtRNA of CMS9B290.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Euphytica 85 (1955), S. 29-34 
    ISSN: 1573-5060
    Keywords: antibiotic resistance ; biolistics ; chloroplast mutations ; Nicotiana ; 16S ribosomal RNA genes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Stable chloroplast transformants were first obtained following particle bombardment of tobacco leaves, and later by PEG-mediated uptake of DNA by protoplasts. The transforming DNA in these studies was itself of plastid origin and carried double (streptomycin, spectinomycin) antibiotic resistance which was used to select transformants. Integration was by homologous recombination, and both donor and recipient were Nicotiana species. Recent characterisation of plastid mutants of Solanum nigrum has allowed the extension of this gene replacement approach to include Nicotiana:Solanum combinations. The introduction of functional heterologous genes into the plastome is an alternative approach based on the use of constructs in which a bacterial resistance gene is flanked by sequences homologous to a region of the recipient plastome. Thus homologous recombination in the flanking sequences allows introduction of a foreign gene. A large number of putative transformants can be generated by the method, but this apparent attraction is partly offset by the need for repeated cycles of re-selection to obtain homoplasmic plants. In contrast, homoplasmy can be accomplished in a single selection step using plastome-encoded antibiotic resistance markers. The plastome is an attractive target for the introduction of useful genes into crop plants, as maternal inheritance acts as an insurance against unwanted spread of the foreign gene, and the large plastome copy number ensures immediate gene amplification and may influence levels of expression. Specific characters encoded on the plastid DNA, including components of photosynthesis and other aspects of metabolism, will also become open to manipulation as a consequence of developments in plastid transformation.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Plant molecular biology 8 (1987), S. 3-12 
    ISSN: 1573-5028
    Keywords: Pisum sativum ; ribosomal RNA genes ; restriction maps ; structural variants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A complete ribosomal DNA (rDNA) repeat unit has been cloned from the genome of Pisum sativum (garden pea) and used to construct a map containing a total of 58 cleavage sites for 23 different restriction enzymes. Regions encoding 18s and 25s ribosomal RNA (rRNA) were identified by R-loop analysis. A 180 bp sequence element is repeated eight times in the intergenic ‘nontranscribed spacer’ (NTS) region, as defined by eight evenly spaced RsaI cleavage sites. Sequence heterogeneity among these elements (subrepeats) is indicated by the presence of an NcoI site within the five RsaI subrepeats distal to the 25s rRNA gene but not in the three subrepeats proximal to this gene, and also by the presence of an additional RsaI cleavage site in one subrepeat. The approximately 4000 copies of the rDNA repeat in the pea nuclear genome show considerable heterogeneity with respect to the length of the NTS region, and differences are also frequently observed between different genotypes. In both cases the length variation appears to be due primarily to differences in the number of subrepeat elements. Comparison of rDNA restriction maps for two pea genotypes separated for hundreds or perhaps thousands of generations reveals that they contain many rDNA identical repeat units. This data is consistent with the view that new rDNA variants are fixed only infrequently in the evolution of a species. Differences also exist between the rDNA repeats of a single genotype with respect to the degree of base modification at certain restriction sites. A large number of sites known to exist in the pea rDNA clone are not cleaved at all in genomic rDNA, or are cleaved in only some copies of the rDNA repeat. We believe these examples of incomplete cleavage results mostly from methylation, although it is difficult to rule out the possibility of sequence variation in all cases. Most putative modifications are best interpreted in terms of cytosine methylation in CG and CXG sequences, but at least one example is more consistent with adenine methylation. We also have constructed a more detailed restriction map of the wheat rDNA clone pTA71 and present a comparison of this map to our map of pea, pumpkin, and wheat in order to assess the amount of useful evolutionary information that can be obtained by comparison of such maps.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Euphytica 85 (1955), S. 149-158 
    ISSN: 1573-5060
    Keywords: plant genetic engineering ; virus-resistant transgenic plants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Transgenic virus-resistant plants were first produced in 1986 by genetically engineering tobacco plants to express the coat protein of tobacco mosaic virus. The introduction of coat protein transgenes has since proved to be an extremely effective and generally applicable approach to engineering virus resistance in crop plants. Extensive field trials with transgenic, virus-resistant tobacco, tomato, potato and cucumber lines have confirmed not only the durability of the resistance under natural conditions but the ease with which virus-resistant lines retaining the original cultivar traits can be recovered. A number of alternative anti-viral strategies based on transgenes from a surprisingly wide variety of sources have also been developed. These include the use of viral genes coding for proteins involved in the replication cycle and in systemic transport of viruses within the plant, the use of interfering viral RNA sequences, and the use of transgenes derived from plant and animal sources. In the latter category, the use of mammalian antibodies to confer disease resistance in plants is a particularly exciting new development. Considerable progress has also been made towards the molecular cloning of natural anti-viral resistance genes in plants.
    Type of Medium: Electronic Resource
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