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  • 101
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 553-560 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We discuss the symmetries, the behavior of the diabatic energy curves, as well as the static aspects of vibronic interaction for diatomic molecules in the presence of a strong magnetic field. Our central subject of investigation is the topology of the adiabatic electronic potential energy surfaces of diatomic molecules which are discussed using some selected examples of the surfaces of the H2+ ion. Global equilibrium configurations corresponding to stable molecular states are found both for the parallel as well as for the perpendicular configurations. For a higher degree of excitation, we observe that the global minimum can belong to the lowest possible symmetry of the ion in the presence of a magnetic field. As an example, we discuss the topology of the 3u potential energy surface.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 553-560, 1997
    Additional Material: 4 Ill.
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  • 102
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 599-605 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Verdet constant describing magnetic optical rotation (MOR) in atoms and molecules is analyzed in terms of polarization propagators. The effect, rotation of the plane of polarization of light by a perturbing magnetic field, is modeled through quadratic response functions (QRFs). For atomic systems, we prove that the standard third-order MOR expression simplifies to the Becquerel dispersion formulation, also known as the normal Verdet constant. This is shown to arise naturally from QRFs under spherical symmetry. A general proof is also offered for the gauge origin invariance of third-order expressions in systems possessing an inversion center. Finally, methods for assessing the completeness of basis-set representation with respect to MOR calculations are discussed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 599-605, 1997
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  • 103
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 619-628 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We discuss the opportunities for experiments in quantum chemistry and molecular physics at magnetic fields in excess of 100 Tesla. In a multinational collaboration, scientists at Los Alamos National Laboratory have led a campaign of experiments using explosively driven generators with peak fields between 130 and 1000 Tesla. Most of these experiments explored quantum-limit phenomena. We expect to conduct a similar campaign in the spring of 1997. We are also planning experiments with several reusable laboratory facilities: (1) the Pegasus high-energy-density facility, an operating 4 MJ fast capacitor bank system, which should be capable of reaching fields of 600 Tesla in practical experimental volumes; (2) the 100 Tesla nondestructive magnet, which is expected to be in operation by 1998; and (3) the Atlas facility, 38 MJ fast capacitor bank system, which should be capable of reaching fields of 1800 Tesla in practical experimental volumes. Atlas should be in operation by 1999. We also discuss some of the experimental techniques developed for both physics and chemistry experiments at high magnetic fields.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 619-628, 1997
    Additional Material: 9 Ill.
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  • 104
    Electronic Resource
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 661-668 
    ISSN: 0020-7608
    Keywords: Hyperspherical harmonics ; radial correlation ; angular correlation ; l limits ; 1S and 3S states of the helium atom ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Effects of different subsets on convergence patterns of hyperspherical harmonic (HH) expansions for the low-lying 1S and 3S states of the helium atom have been investigated with the correlation-function-hyperspherical-harmonic-generalized-Laguerre-function (CFHHGLF) method by successively introducing HH subsets with the fixed three-dimensional angular momentums (l) into the atomic wave functions. The eigenenergies given by the HH subsets of l=0, 1, 2, and 3 are in good agreement with the best s-, sp-, spd-, and spdf limits of variational configuration interaction (CI) calculations, respectively. The final eigenenergies of the ground state as well as the examined low-lying excited 1S and 3S states are quite close to the exact Hylleraas CI (HCI) values at the sixth decimal place. Moreover, l=0 and l≠0 expansion results also tell us that it is not necessary to take into account too many HHs at the given l, especially for higher l, and that the more the absolute electron correlation energies the bigger l it takes to obtain precise eigenenergies.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 661-668, 1997
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  • 105
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 703-710 
    ISSN: 0020-7608
    Keywords: Superconductor ; Ba0.6K0.4BiO3-δ ; oxygen content ; band structure ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The band structure calculations on the K-doped superconductor Ba0.6K0.4BiO3-δ were carried out, and the effect of the oxygen content on its electronic structures was studied in the present work. The results show that the variation in the oxygen content caused by the partial substitution of K for Ba has a great effect on its electronic structure. The oxygen vacancies cause the saddle point singularity to be displaced gradually as the oxygen content is decreased, whereas the band structure is only translated a little and remains unchanged in shape, which reflects the non-rigid-bandlike behavior of Ba0.6K0.4BiO3-δ in the presence of the oxygen vacancies. When the saddle point singularity is displaced and lies at the Fermi level Ef, the total density of states at Ef, N(Ef), has the highest value which is twice as large as that of the Ba0.6K0.4BiO3 compound without the oxygen vacancies. These results reveal the important role of the oxygen content in the Ba-K-Bi-O superconducting system.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 703-710, 1997
    Additional Material: 6 Ill.
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  • 106
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 721-733 
    ISSN: 0020-7608
    Keywords: Flavins ; ab initio calculations ; CIS/CNDO ; electronic properties ; reactivity of flavoproteins ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electronic and structural properties of three protonated forms [HFlox, H2Flox+(N5), and H2Flox+(N1)] of lumiflavin have been determined at the HF/3-21G level of approximation. Larger delocalization and basicity explain the favorable protonation of N1 with respect to N5 whereas N1 protonation considerably activates the electrophilicity of N5 with respect to C4a. The relative position of the first electronic transition evaluated at the CNDO/CI level for the radicalar H2Fl·(N5) and H2Fl·(N1) structures further supports the classification of the flavoenzymes into two classes. Moreover, the π-π* transition has been correctly placed as the lowest energy transition for the neutral oxidized lumiflavin and predicts a blue shift of the low-lying electronic transition upon monoprotonation. Finally, from the analysis of the molecular complex between oxidized lumiflavin (HFlox) and hydroquinone, we have rationalized the complex formation in terms of the complementarity between the molecular electrostatic potentials as well as in terms of the overlap between the frontier orbitals involved in these charge transfer process.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 721-733, 1997
    Additional Material: 10 Ill.
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  • 107
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 37-48 
    ISSN: 0020-7608
    Keywords: pseudo-Jahn-Teller effect ; vibronic coupling ; molecular geometry ; energy surfaces ; random-phase approximation ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The traditional description of pseudo-Jahn-Teller molecular configuration instability based on Bader's formula for the curvature of the adiabatic potential is reconsidered in order to make it consistent with straightforward calculations of the ground-state energy surface within Hartree-Fock-Roothaan approximation. The proposed approach employs floating molecular orbitals constructed by “frozen LCAO” coefficients (computed in the reference geometry) and floating atomic orbitals, which allows one to exclude the vibronic mixing with the excited states irrelevant from chemical point of view. The relaxation (vibronic) contribution to the instability, expressed in terms of one-electron quantities, involves two sets of orbital vibronic constants. These are, respectively, defined as matrix element derivatives of correct and “frozen LCAO” Fock operators between occupied and unoccupied molecular orbitals. The canonical form of the relaxation contribution can be achieved when the vibronic interaction is presented as a mixing between the ground electronic state and the excited states calculated within the random-phase approximation   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 37-48, 1997
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  • 108
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 107-119 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The properties of the spin-adapted reduced Hamiltonian (SRH) matrices and of their eigenvectors permit in many cases a projection of the two-electron matrices, which amounts to an effective truncation of the basis at the stage of the calculations which are time and as memory consuming. Besides this effective truncation of the basis, another simplification can be introduced by segregating an n-electron cloud from the N electrons of the system. Thus, the energy and the electron distribution of a smaller electronic cloud, for instance, the π or the σ cloud in aromatic systems, can be calculated; their separability being subsequently analyzed. Different relevant spaces have been examined in the study of the π-electron cloud in benzene and naphthalene.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 107-119, 1997
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  • 109
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 151-158 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A relativistic direct perturbation theory approach has been implemented at the multiconfiguration Hartree-Fock level into the numerical program package LUCAS. The method has been applied to the closed-shell Be, Zn, Cd, and Hg atoms and to the rare gases Ne to Rn. The scalar relativistic valence-correlation correction to the rare gases is found to be very small, while for Zn, Cd, and Hg the first-order relativistic corrections to the valence-correlation energy are calculated to be -4.6, -6.3, and -17.4 mH, respectively.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 151-158, 1997
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  • 110
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 89-96 
    ISSN: 0020-7608
    Keywords: Semiclassical approach ; rotational excitation ; A-A variables ; Monte Carlo calculation ; total cross section ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A semiclassical approach is applied to calculating the state-to-state cross sections of rotational excitation of ammonia molecule scattering with the argon atom. Semiclassical theory is more useful in studying heavy molecular scattering. Ammonia molecule is regarded as a rigid symmetric top and argon as a structureless atom. The inversion motion of ammonia is not taken into account. We make use of classical action-angle variables to describe the degrees of freedom of the system. The ab initio potential is used, and at two different energies the computing of total cross sections are performed by using the Monte Carlo procedure. Good agreements with close-coupling calculations and crossed molecular beam experiment are obtained. The semiclassical approach thus appears to be valid for ammonia-argon scattering system.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 89-96, 1997
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  • 111
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 143-150 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We express the hydrogen-type orbitals as integral transforms of Gaussian functions. The topographic features of the analytical expressions for the weight functions provide ways for the design of basis sets.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 143-150, 1997
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  • 112
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 64 (1997), S. 669-678 
    ISSN: 0020-7608
    Keywords: Molecular geometry ; symmetry ; symmorphy ; topology ; electron density ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Relations between an earlier generalization of molecular symmetry called symmorphy and a molecular equivalence based on diffeomorphisms of electron density functional graphs (the so-called DFG equivalence introduced in our previous work) are analyzed. Any two DFG-equivalent electron density functions can be derived from one another by a suitable transformation of the spatial coordinates and the electronic charge density scale; the classes of DFG equivalence are the orbits of a group of linear operators operating in the space of electron density functions. Within the symmorphy framework, the symmetry group is derived from the symmorphy group by taking an intersection of a subgroup of the symmorphy group and the group of isometries for a natural choice of the Riemannian metric tensor. The Riemannian metric properties provide a choice for a suitable reference electron density function for each class of equivalent densities. Such reference densities serve as tools for a systematic classification of the infinite family of electron densities of molecular conformations.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 669-678, 1997
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  • 113
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 65 (1997), S. 709-717 
    ISSN: 0020-7608
    Keywords: Monte Carlo simulation ; amides ; hydrogen bond ; radial distribution functions ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Monte Carlo simulations of liquid formamide, N-methylformamide (MF), and N,N-dimethylformamide (DMF) have been performed in the isothermal and isobaric ensemble at 298 K and 1 atm, aiming to investigate the C(SINGLE BOND)H(DOTTED BOND)O and N(SINGLE BOND〉H(DOTTED BOND)O hydrogen bonds. The interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term on a rigid six-site molecular model with the potential parameters being optimized in this work. Theoretical values obtained for heat of vaporization and liquid densities are in good agreement with the experimental data. The radial distribution function [RDF, g(r)] obtained compare well with R-X diffraction data available. The RDF and molecular mechanics (MM2) minimization show that the C(SINGLE BOND)H(DOTTED BOND)O interaction has a significant role in the structure of the three liquids. These results are supported by ab initio calculations. This interaction is particularly important in the structure of MF. The intensity of the N(SINGLE BOND)H(DOTTED BOND)O hydrogen bond is greater in the MF than formamide. This could explain some anomalous properties verified in MF.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 709-717, 1997
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  • 114
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    International Journal of Quantum Chemistry 65 (1997), S. 749-758 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A density functional theory study of Au, Au2, Au3, and Au4 is performed focusing on the study of gold tips or contacts of interest in investigations of molecular-scale electronics. The ground state for the four systems corresponds to the one with the lowest multiplicity, and the ordering of energies follows the multiplicity in all cases. It is found that the tetrahedral geometry of Au4 is not the preferred one for the lowest spin states with neutral charge, but is the preferred one for charged systems. The ionization potential and electron affinities for the four systems were also obtained. A qualitative interpretation of the Kohn-Sham highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) orbitals is given based on the present calculations.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 749-758, 1997
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  • 115
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    International Journal of Quantum Chemistry 65 (1997), S. 997-1003 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Values of several parameters appearing in the modified Bethe-Bloch theory must be known if one is to calculate the stopping power for a given projectile-target combination within the energy interval of applicability of the theory. In the course of the past several years, the author has established values for kapton and mylar target materials through fits of experimental data with the modified Bethe-Bloch theory. During the past year, several sets of measurements of polystyrene stopping powers for light projectiles have been studied so as to extract values of Bethe-Bloch parameters also for this target material. Results of these studies, including uncertainties in the parameter values that reflect the number and accuracy of the measurements analyzed, are summarized in this presentation.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 997-1003, 1997
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  • 116
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    International Journal of Quantum Chemistry 65 (1997), S. 1065-1076 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We consider the problem of quantitative characterization of the molecular surface. We start with a set of matrices, the elements of which give interatomic separation and higher powers of the separations. Averaged row sums of individual matrices suitably normalized give molecular profiles. The problem that we consider is how to generalize this approach to 2-dimensional and 3-dimensional objects. By using a large number of random points distributed over the molecular surface or molecular volume, respectively, we arrive at matrices from which one can extract invariants that offer a good characterization of the molecular surface and the molecular volume. It is suggested that the ratio V/S, where V and S are components of the volume and surface profile for a molecule, respectively, represents a novel shape index.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 1065-1076, 1997
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  • 117
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    International Journal of Quantum Chemistry 65 (1997), S. 1107-1114 
    ISSN: 0020-7608
    Keywords: Valpromide derivatives ; anticonvulsant activity ; similarity analysis ; pharmacophore ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A conformational and electronic semiempirical quantum-chemical study of several N-substituted valpromides is presented, followed by a similarity analysis that takes into account the flexibility of the molecules. Rigid analogs are included in the comparison in order to help identify the anticonvulsant active conformations. On the basis of a superposition analysis, which includes both active and nonactive structures, and uses the global minimum-energy conformation of phenytoin as a template, the pharmacophoric pattern of N-substituted valpromides is defined. It is related to the antiperiplanar orientation of the amide function relative to the hydrocarbon chain.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 1107-1114, 1997
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  • 118
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    International Journal of Quantum Chemistry 65 (1997), S. 1125-1134 
    ISSN: 0020-7608
    Keywords: leupeptin ; papain ; semiempirical ; cysteine protease ; active center ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this work, we modeled leupeptin (Ac.Leu.Leu.Arg.CHO), a natural inhibitor of proteases, and the active site of papain, a cysteine protease, using as a template the crystal structure of a leupeptin-papain complex recently obtained by Schroder and co-workers [FEBS Lett. 135(1), 38 (1993)] and including 11 amino acids relevant to the proteolytic activity of the enzyme. Our results show that the AM1 fully optimized leupeptin is more stable than is the leupeptin crystal structure by about 6.0 kcal/mol. Our results show also that in the modeled active center of papain the S - H⋅⋅⋅N structure is favored. When the aldehyde is included in the calculation, however, proton transfer occurs with a strengthening of the S-⋅⋅⋅HIm+⋅⋅⋅O(DOUBLE BOND)C (Asn175) catalytic triad. The AM1 method reproduces fairly well the interactions between the enzyme and the host molecule.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 1125-1134, 1997
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  • 119
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    International Journal of Quantum Chemistry 65 (1997), S. 1135-1152 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A series of semiempirical molecular orbital calculations using the AM1 method were performed on the inclusion complexes of α- and β-cyclodextrin with benzoic acid and phenol in the “head-first” and “tail-first” positions. The AM1 results show that α-cyclodextrin complexes with both guest compounds in the “head first” position are more stable than in the “tail-first” position, while the β-cyclodextrin complex with phenol in the “tail-first” position is more stable, but with benzoic acid, the “head-first” position is more stable. The driving forces for complex formation were investigated based on different intramolecular and intermolecular interactions. In addition, 1SCF AM1 calculations were performed on the β-cyclodextrin complexes with benzoic acid in the “tail-first” and “head-first” positions with the benzoic acid moved stepwise along the Z-axis of the β-cyclodextrin principal axis coordinate system.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 1135-1152, 1997
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  • 120
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    International Journal of Quantum Chemistry 65 (1997), S. 625-631 
    ISSN: 0020-7608
    Keywords: ab initio ; oxygen vacancy ; doping ; titanium oxide surface ; varistor ceramics ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We theoretically investigated how the formation of oxygen vacancies and the addition of niobium and chromium atoms as dopants modify the varistor properties of TiO2. The calculations were carried out at the HF level using a contracted basis set, developed by Huzinaga et al., to represent the atomic centers on the (110) surface for the large (TiO2)15 cluster model. The change of the values for the net atomic charges and band gap after oxygen vacancy formation and the presence of dopants in the lattice are analyzed and discussed. It is shown that the formation of oxygen vacancies decreases the band gap while an opposite effect is found when dopants are located in the reduced surface. The theoretical results are compared with available experimental data. A plausible explanation of the varistor behavior of this system is proposed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 625-631, 1997
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  • 121
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    International Journal of Quantum Chemistry 65 (1997), S. 679-688 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio calculations, including the electron correlation effects via the Møller-Plesset partitioning, of the static longitudinal polarizability (αL), first and second hyperpolarizabilities (βL and γL) of small push-pull molecules have been carried out with the 6-31G and 6-31G* basis sets. Two types of conjugated segment (polyacetylene and polyyne) were used as linker between the nitro and amino fragments, chosen as acceptor and donor groups. For small chains, the triply bonded structures lead to larger γL than the doubly bonded structures, although the αL and βL values order in the opposite direction. The second-order Møller-Plesset (MP2) corrections are essential to obtain correct estimates of the hyperpolarizabilities and are generally much larger than the MP3 and MP4 contributions. Geometry optimizations were carried out with both basis sets within the Hartree-Fock and MP2 schemes; the MP2 geometries lead to smaller bond length alternations and thus larger (hyper)polarizabilities. For αL a careful choice of the geometry is more crucial than the use of polarization functions during the electronic state calculations; however, for the hyperpolarizabilities, both the geometry and the basis set are of importance.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 679-688, 1997
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  • 122
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electronic structures and properties of carbides MC, M5C (M=Fe, Ni, Cu), and TiC and Ti7C were studied using density functional methods (DF), particularly the local density approach (LDA) with the Vosko-Wilk-Nusair (VWN) correlation functional, the generalized gradient approximation (GGA) of Becke and Perdew (using Becke's 1988 exchange functional and Perdew's 1986 correlation functional - BP86), and the ADF program of Baerends et al. In the first part of this report, we studied equilibrium geometries and dissociation energies for the process MC→M+C involving the doublet ground state for M=Cu, singlet and triplet states for M=Ni, and triplet and quintuplet states for M=Fe, Ti. Charge distributions by population analysis, dipole moments, and vibrational frequencies were also evaluated. All calculations were done using triple-zeta basis sets, with frozen-core orbitals and the GGA corrections. In the second part of this report, we consider the doublet states of Cu5C and singlet and triplet states of Ni5C, taking planar and nonplanar models for the M5 clusters. The triplet and quintuplet states of Fe5C were studied with a nonplanar model for the Fe5 cluster, whereas in the case of the triplet and quintuplet states of Ti7C, a Ti7 planar model was chosen. Optimization of the position of the C atom in the cluster, dissociation energies, distribution of charges in the molecule, and dipolar moments were also analyzed, and comparisons with the results obtained for the corresponding carbides (MC) were made. These results, together with the ones of the corresponding carbonyls - that have previously been done by the same methodology - provide us with an interesting comparison of the M(SINGLE BOND)C bond dissociation energy in carbides and carbonyls. Calculations of the C(SINGLE BOND)O bond dissociation energies for the MCO and MnCO compounds were also performed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 919-928, 1997
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    International Journal of Quantum Chemistry 62 (1997), S. 167-169 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is shown that if a pair of alternant molecules are isospectral (they have identical energy spectra) in the topological - Hückel - approximation they are also isospectral, taking into account the electron correlation. The proof is given in the AMO approximation using a Hubbard Hamiltonian. © 1997 John Wiley & Sons, Inc.
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  • 124
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    International Journal of Quantum Chemistry 63 (1997), S. 537-546 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The correlation between intramolecular bond length and vibrational frequency shifts was calculated at the MP4(aug-cc-PVTZ) ab initio level for a number of molecules (LiH, BH, HF, OH-, HDO, BF, CN-, and HCI) exposed to uniform electric fields in the range from -0.10 to +0.10 au. The “ω vs. re” correlation curves always consist of two branches, each approximately linear. The slopes for the molecules investigated here vary between -2500 and -16600 cm-1/Å. The slopes are well described by an expression containing only the free-molecule second- and third-order force constants and the reduced mass for the stretching mode. Experimental data for polar molecules can be expected to show deviations from a linear “ω vs. re” correlation (i) for molecules where the maximum of the frequency vs. field curve occurs at a positive field and (ii) for molecules where the maximum of the frequency vs. field curve falls on the negative-field side but very close to the zero-field case, and (iii) in bonding situations when there is much electron overlap. As opposed to uniform-field situations, anharmonicity and electronic overlap have a substantial influence on the “frequency vs. re” slopes in molecular environments. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 537-546, 1997
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  • 125
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    International Journal of Quantum Chemistry 63 (1997), S. 575-583 
    ISSN: 0020-7608
    Keywords: iodine compounds ; DFT ; Mössbauer ; isomer shifts ; nuclear quadrupole resonances ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the present work we show the first application of density functional theory (DFT) with gradient-corrected exchange-correction functionals within the linear combination of Gaussian-type orbitals (LCGTO) formalism to the calculation of isomer shifts and quadrupole couplings for a large and varied set of iodine compounds: I2, ICl, IBr, ICN, HI, KI, CH3I, CH2I2, CHI3, CI4, SiI4, GeI4, and SnI4. The results are compared with experimental data from Mössbauer spectroscopy. The overall agreement with experiment is most satisfactory, with the exception of the highly dipolar systems ICl, IBr, and ICN. For these systems it is believed that the free molecule assumption of the calculations is not an entirely valid model of the crystalline environment of the experiments. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 575-583, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 623-629 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the spirit of Jean-Louis Calais's endeavor to effectively combine the tools of quantum chemistry and solid-state physics to study the electronic structure of materials, Hartree-Fock calculations of core-level binding energy shifts in Li chains and Li slabs and their relation to surface effects, charge oscillations, and dimensionality of a system are presented. For the one-dimensional system the 1s binding energy oscillates regularly from the edge Li atom to the center, the 1s level of the edge atom being shifted to a larger binding energy. For two-dimensional Li slabs which model the (001) surface of Li, the 1s level of the top layer atom is found to have the largest binding energy, being ∼ 0.5 eV below the 1s levels of the other layers, and the binding energy is constantly decreasing from the surface to the bulk, independent of the charge population and without oscillations. Both Mulliken population analysis and charge difference plots indicate that the edge atom in the chain is positively charged, whereas the surface atoms in the slab are negatively charged. This shows that a positive or negative net valence population alone does not determine the direction of the shifts. The predicted core-level binding energy shifts should be observable with high-resolution synchroton measurements. The distinct differences predicted for core-level shifts for one- and two-dimensional systems can be used to characterize and probe the geometry of nanostructures. © 1997 John Wiley & Sons, Inc.
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  • 127
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    International Journal of Quantum Chemistry 63 (1997), S. 655-665 
    ISSN: 0020-7608
    Keywords: polyacetylene ; alkali-doped ; spectrum ; calculation ; semiconductor-metal transition ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A local model is set up for the conductivity in alkali-doped polyacetylene (PA) based on results of ab initio and semiempirical calculations. At low doping levels, solitons and polarons appear naturally in the (nondegenerate) ground state. Alkali atoms donate their valence electrons to neutral solitons, which have the highest electron affinity in the PA structure. Due to the high polarizability of the PA chains, there is a charge buildup on a few carbon atoms close to the alkali ion. At the same time, a new soliton, screened from the alkali ion, is formed some distance away from the latter. This solition may migrate through the PA polymer partly by hopping for one chain segment to another (Ea ≥ 0.15 eV) and partly by soliton motion. In the calculation of the spectra, we used geometry-optimized structures and configuration interaction (i.e., taking into account electron-lattice interaction and explicit Coulomb correlation) and obtained good agreement with experimental spectra. As the concentration of alkali is increased, absorption occurs at energies below 1 eV. At higher doping levels, corresponding to a few mol%, the electrons delocalize over many alkali spacings and the trapping capability of the polymer decreases the conductivity becomes bandlike. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 655-665, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 709-718 
    ISSN: 0020-7608
    Keywords: Fourier space ; band structure ; density of states ; lattice summations ; RHF metallic solution ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Minimal basis-set STO-3G calculations on the infinite metallic chain of lithium atoms, (SINGLE BOND Li SINGLE BOND)x, performed within the Fourier space-restricted Hartree-Fock approach (FS-RHF), are reported to illustrate that the Fourier representation method, in which all lattice summations are accurately carried out to infinity, is able to reproduce the genuine features of the RHF approach for the metallic cases, i.e., the vanishing of the density of states at the Fermi energy. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 709-718, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 719-728 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A direct full configuration interaction approach, previously used for studying individual low-lying eigenvalues, is combined with iterative Lanczos calculations, in order to obtain global properties of large Hermitean Hamiltonian matrices. To this effect systematic generation of random start vectors is used to compute statistical approximations to the density of states (DOS). Applications for cyclic polyenes in order to illustrate the viability of the scheme modeled by correlated, high-binding Pariser-Parr-Pople (PPP) Hamiltonians of increasing complexity are presented. The degree of correlation in the solutions is controlled by the parameter β. Convergence properties of the DOS for N = 10 and N = 14 are studied varying the extent of correlation. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 719-728, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 749-765 
    ISSN: 0020-7608
    Keywords: building-block ; polymer ; NEXAFS ; static exchange ; x-ray absorption ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The poly(ethylene-terephthalate) and poly(bisphenol-A-carbonate) compounds are used to illustrate the possibilities and limitations of building-block analysis of polymer near-edge X-ray absorption spectra. Experimental spectra obtained for thin polymer films are analyzed using theoretical static exchange calculations of C1s and O1s excitation spectra on model molecules selected as possible building blocks. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 749-765, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 767-780 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The relation between receptor structure and the mechanism by which ligands with different pharmacological efficacy elicit a response is analyzed in a three-dimensional molecular model of the human 5-HT1A receptor [Pardo et al., J. Biomed. Sci. 3, 98 (1996)]. According to the model, the main interaction of the endogenous neurotransmitter serotonin (5-HT) to the human 5-HT1A receptor consists of (i) the ionic interaction between the protonated side-chain amine of 5-HT and the conserved Asp-116, located in transmembrane helix (TMH) 3; (ii) the hydrogen bond between the 5-OH group of 5-HT and Thr-199, located in TMH 5; and (iii) the complex between the aromatic indole ring of 5-HT and His-192, located in TMH 5. Ab initio quantum chemical calculations were used to position ligands in molecular models of the binding pocket of the 5-HT1A receptor consisting of these interacting residues. The consequences of the interactions between the ligands and the proposed recognition sites of the 5-HT1A receptor, reflected in the electronic structure of the complexes, suggest a mechanism by which the receptor activation is triggered by ligand binding. Results from the computations show a more favorable interaction of the aromatic ring of 5-HT (or of the 5-HT1A selective agonist 8-OH DPAT) with the protonated form of His-192 than with the neutral form. The change in the reactivity of the imidazole ring then leads to the attraction of a proton from another site in the receptor: Arg-175 in TMH 4. This proton transfer to His-192 that is triggered by the interaction with ligand is facilitated by Asp-191 in TMH 5, as shown by energetic considerations. The position of the ligand recognition pocket in the transmembrane bundle of the 5-HT1A receptor suggests that the ligand-induced proton transfer may cause a conformational change in the tertiary structure of the receptor that could be transmitted toward the intracellular end to facilitate the transmission of the signal. © 1997 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 63 (1997), S. 853-860 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Calculations of spectral characteristics of seven Ru(II) and Ru(III) complexes were performed. The excitation energies of the compounds studied in this work are in agreement with experimental data. Some regularities in the structure of excited states were demonstrated. Our results show that the use of the quantum chemical methods in which the reorganization and solvent effects are included explicitly can give reliable information concerning electronic structure and spectra of complex transition-metal compounds. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 853-860, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 861-874 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Direct ab initio dynamics calculations based on a canonical variational transition-state theory with several multidimensional semiclassical tunneling approximations were carried out to obtain rate constants for the water-assisted tautomerization of formamide. The accuracy of the density functionals, namely, B-LYP, B3-LYP, and BH&H-LYP, were examined. We found that the BH&H-LYP method yields the most accurate transition-state properties when comparing it to ab initio MP2 and QCISD results, whereas B-LYP and B3-LYP methods predict barrier heights too low. Reaction path information was calculated at both the MP2 and nonlocal hybrid BH&H-LYP levels using the 6-31G(d,p) basis set. At the BH&H-LYP level, we found that the zero-point energy motion lowers the barrier to tautomerization in the formamide-water complex by 3.6 kcal/mol. When tunneling is considered, the activation energy at the BH&H-LYP level at 300 K is 17.1 kcal/mol. This is 3.4 kcal/mol below the zero-point-corrected barrier and 7.0 kcal/mol below the classical barrier. Excellent agreement between BH&H-LYP and MP2 rate constants further supports the use of BH&H-LYP for rate calculations of large systems. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 861-874, 1997
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    International Journal of Quantum Chemistry 63 (1997), S. 913-916 
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    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The leaky aquifer function W(x,y), an incomplete Bessel function which has had application in hydrology, is now also arising in electronic-structure calculations on periodic systems. This work presents an expansion which improves the efficiency of calculation of W in the range where x and y are comparable and both are larger than unity. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 913-916, 1997
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  • 135
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    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
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    Topics: Chemistry and Pharmacology
    Notes: We have studied the variation of hardness, polarizability, and electronic and nuclear repulsion energy components of molecules in different nonequilibrium situations obtained by bond distortion and also by placing external point charges on the symmetry axis of the molecules. The above quantities are calculated through Kohn-Sham version of spin-polarized density functional theory with nonlocal exchange correlation functional. Interesting correlations have been found to exist between different energy components, hardness, and polarizability. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 917-926, 1997
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  • 136
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    International Journal of Quantum Chemistry 63 (1997), S. 961-979 
    ISSN: 0020-7608
    Keywords: symmetric group ; class algebra ; class sums ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Progress in the formulation of a procedure for the combinatorial evaluation of the product of a single-cycle and an arbitrary class sum in the symmetric group algebra is presented. The procedure consists of a “global conjecture” concerning the representation of the product [(p)]n·[*]n in terms of a set of operators referred to as reduced class sums, and of an (incomplete) set of rules for the evaluation of the (n-independent!) coefficients of these operators. Two new types of index elimination rules are suggested, and some properties of the formalism are explored. These include useful sum rules as well as a certain “detailed balance” property that sheds some light on a combinatorial aspect of the global conjecture. The present results account for several new types of reduced class coefficients and suggest some feasible further developments. Some outstanding open problems are pointed out. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 961-979, 1997
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  • 137
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    International Journal of Quantum Chemistry 64 (1997), S. 35-42 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A simple algebraic manipulation is presented for obtaining the analytical rectangular coordinate expressions of the atomic orbital wave functions with angular quantum number l of a D-dimensional atom, where no hyperspherical harmonics or any differential calculus is involved. A general expression of the D-dimensional f-orbitals is given which supplements the previously obtained result of D-dimensional d-orbitals.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 35-42, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 31-33 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Chemical reactions - as well as other collision processes - proceed generally from input elements condensing into a transitional complex and then dissociating into new fragments. Viewing the complex formation as reciprocal to its fragmentation combines them into conjugate elements of a single process, namely the complex evolution from a compact to a fragmented form, as its radius of inertia expands. As the wave functions of an atomic electron resolve conveniently into their radial and spherical-harmonic elements, so do those of multiparticle complex resolve into radial and hyperspherical-harmonic parts. Their numerical integration becomes thus accessible without resort to independent-particle or perturbative approximations. This approach displays a complex progressive branching into fragmentation channels. Evidence from small prototypes has shown each branching step to involve only a modest subset of the infinite harmonics set.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 31-33, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 43-51 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A zero-order wave function of a dimer is defined as the antisymmetrized product of monomer Hartree-Fock wave functions. A symmetry-adapted many-body perturbation theory is developed up to the third order to obtain interaction energies at the Hartree-Fock level. Correlation effects are accounted for at the second order. The theory is based on second quantization to ensure full symmetry forcing. Intermolecular overlap effects are handled by the biorthogonal formulation. Test calculations on dimers of He, H2, HF, and water show that the third-order results are very accurate. No “instability” due to the use of biorthogonal orbitals was observed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 43-51, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 53-61 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Nonadiabatic effects resulting from very short rise times (few femtoseconds) of intense (tens of TW/cm2) laser pulses may enhance in an unexpected way dissociation rates of molecules interacting with such radiation fields. Starting from a given initial vibrational level, the wavepacket describing the molecule-plus-field system is spread over several resonances (instead of a single one predicted when the laser is adiabatically switched on) interfering during the excitation process. The article reviews typical signatures of the time-dependent nonadiabatic behaviors of vibrational states' survival probabilities and of fragments' kinetic energy spectra. A H2+ molecular ion irradiated by short intense laser pulses in the UV absorption wavelength regime is taken as an illustrative example. A possibility of dissociating the system using a single photon of 532 nm wavelength is devised, with the peculiarity that the energy carried by this photon is not enough for the fragmentation to occur. The suggested mechanism, which may be called below threshold dissociation, refers to a highly nonadiabatic switching on of the laser, leading to the temporal excitation of some resonances with efficient decay rates.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 53-61, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 63-69 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The resolution of the identity (RI) approximation to the Hartree-Fock method was implemented within the NWChem suite of ab initio programs for parallel computers. After a description of the method, a detailed account of the implementation is given. We present a sample calculation and compare its performance and accuracy to an “exact” direct SCF calculation. Problems and limitations of the method are also discussed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 63-69, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 71-83 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We describe the direct photodesorption of CO from the Ni(001) metal surface during the absorption of a short pulse of UV light by the adsorbate and account for the dynamics of the desorbing species coupled to electronic excitations of the substrate, which lead to energy dissipation. The interaction potentials and couplings for the ground and excited states are obtained from electronic structure calculations and from experimental information. The time evolution of CO vibrational populations is studied for propagating wavepackets for the adsorbate-substrate complex with a split-operator algorithm, followed by a perturbative treatment of dissipation and response to the light pulse. Direct photodesorption is found to occur predominantly in the excited electronic state and is compatible with dissipation. Results are presented for CO photodesorption by Gaussian pulses with several durations to show the effect of light pulse shapes on the time evolution of populations. Shorter pulses in the femtosecond range are shown to give relatively larger populations of excited vibrational states during the desorption of CO.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 71-83, 1997
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  • 143
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    International Journal of Quantum Chemistry 64 (1997), S. 143-155 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A macroscopic solution polarization free-energy functional is combined with semiempirical molecular orbital theory to study shifts of electronic absorption energies for several molecules in solution. The present method requires calculation of the induced electrostatic potential on the van der Waals surface and this calculation is implemented in a new way. The combined method is tested by calculating absorption energy shifts for several molecules of standard interest. We find the physically reasonable result that there is a correlation between the absorption energy shift and the magnitude of the dipole moments of the initial and final states involved in the absorption transition.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 143-155, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 175-182 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Double-ionization energies, for transitions from the ground state of the neutral propyne molecule to both singlet and triplet states of its dication, are investigated theoretically with the ab initio second-order algebraic diagrammatic construction [ADC(2)] propagator method. The results are compared with a previous study which reported both experimental data obtained from double-charge-transfer (DCT) spectroscopy and their analysis with semiempirical theory. The ADC(2) predictions match almost all the experimental peaks well. In the lower-energy range, for transitions to dication states up to 7 eV above the ground state, ADC(2) predictions indicate that significant energy separations of those dication terms dominated by a common electronic configuration are responsible for previous difficulties in the assignment of peaks in that region. At higher energies, both configuration interaction and satellite ionizations are significant.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 175-182, 1997
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    International Journal of Quantum Chemistry 64 (1997), S. 211-222 
    ISSN: 0020-7608
    Keywords: quantum chemistry ; weak interactions ; cationic van der Waals complexes ; cluster cations ; potential energy surfaces ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ions of molecular complexes with internal interactions partly of van der Waals type differ significantly from their neutral parent species in binding, structure, and dynamics. Information about such systems is still rather scarce, both experimentally and theoretically. The article discusses some aspects of the present knowledge concerning cationic dimers and trimers of the type RgnM+ with Rg denoting a rare-gas atom, and M, either a (diatomic) molecule or a rare-gas atom, in comparison with the neutral counterparts. In some more detail, potential energy surfaces (PESs) for the six lowest electronic states of ArHCl+ are reported, as obtained from multireference CI calculations with an extended Gaussian AO basis set. From the PESs, structural, energetical, and dynamical features are derived. For the cationic argon trimer Ar3+ in the electronic ground state, a detailed analysis of the PES, the mode couplings, and the classical internal dynamics is carried out, leading to a consistent picture of a floppy molecular aggregate with rapid energy exchange between internal degrees of freedom and early onset of classical chaos with increasing energy.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 211-222, 1997
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  • 146
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    International Journal of Quantum Chemistry 64 (1997), S. 247-248 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is well known that urea-nitrate (UN) is a white solid complex prepared by urea with nitric acid, which is thus usually written as U⋅HNO3, (U--urea). Now it has widely been applied to fertilizer manufacture, chemical washing, petroleum opening, and other fields in industry because of its solubility in water into the original materials, i.e., urea and nitric acid. Up to now little is known about the electronic structure and chemical bond of UN. Therefore in this study the electronic structure of UN has been calculated by the SCC-DV-Xα method and its infrared and ultraviolet absorption bands and XPS binding energy have been investigated. On the basis of these, the chemical bond of UN has been discussed and a chemical formula for UN, [UH]+NO3-, to be named uronium nitrate, is proposed.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 247-248, 1997
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  • 147
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    International Journal of Quantum Chemistry 64 (1997), S. 271-283 
    ISSN: 0020-7608
    Keywords: acropetal ; adsorption ; aquatic plants ; polynuclear aromatic hydrocarbons ; sediments ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Saturation phenomena for the uptake of polynuclear aromatic hydrocarbons (PAHs) by rooted aquatic plants were observed in both field and laboratory experiments. From these data, a Langmuir adsorption model was derived and was shown to describe the assimilation of sediment PAHs by aquatic plants at low-sediment PAH concentrations. The low-concentration restrictions were relaxed by using an empirical Freundlich model. This permitted the specification of equilibrium constants, relative rate constants for adsorption and desorption, and saturation levels, and it provided a realistic description of the acropetal mobilization of sediment PAHs by rooted aquatic macrophytes. The growth of aquatic plants was found to be inhibited by sediment PAHs, but at concentrations several orders of magnitude above the corresponding threshold effect levels for aquatic animals. The effects of the acropetal transport of sediment PAHs into the above-soil portions of aquatic plants merits further investigation because of the possibility of an enhanced availability of these carcinogens to associated aquatic food webs. In addition, these results may suggest pathways for bioremediation of the impact of PAHs on associated biota.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 271-283, 1997
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  • 148
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    International Journal of Quantum Chemistry 64 (1997), S. 325-336 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have already proposed a convenient method to estimate the magnitude of the Peierls instability in finite one- and two-dimensional (1D and 2D) polyenes from the viewpoint of orbital symmetry [J. Chem. Phys., 103, 9726 (1995)]. This treatment is applied to a model system for charge-transfer complexes, in which the unpaired electron is occupied in a molecule, generating a half-filled energy band by intermolecular interaction. As the first step, a model molecular crystal composed of ethylene anion (or cation) molecules is treated to confirm the applicability of our formulas for 2D polyene. It is clearly shown that molecules in a crystal are structurally distorted to gain the energetic stabilization within the 1D structure, while they are rearranged in a regularly equidistant structure under strong interchain interaction. This treatment would provide insight into the relationship between the crystal structure of charge-transfer complexes and its electronic property.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 325-336, 1997
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  • 149
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    International Journal of Quantum Chemistry 64 (1997), S. 387-392 
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    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: To obtain new insight into the nature of the correlations in distributions of nucleotides in DNA sequences, an efficient algorithm is presented by means of which one can generate nucleotide sequences with prescribed correlational properties. It is demonstrated in the case of human T-cell receptor beta chain gene segment that by extracting a finite number of parameters from the natural sequence one can generate artificial sequences which reproduce the correct correlational properties. It is shown how the apparent long-range correlations, or - what is equivalent - the 1/f form of the spectral density result due to the arrangement of DNA segments with different functional roles which also differ in composition in terms of nucleotide classes. This approach enables one to get under control the impact of statistical fluctuations which represent a major obstacle in the analyses of finite natural sequences.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 387-392, 1997
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  • 150
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    International Journal of Quantum Chemistry 64 (1997), S. 411-420 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A linear scaling of the number of nonzero integrals in extended systems calculations and the solution of the difficult cutoff threshold problems in the integral evaluation of periodic HF computations could be solved by the usage of orbitals with a finite extension. The present work proposes the usage of Box orbitals, defined inside spheres centered on the nuclei. Preliminary tests on small systems (atoms and H2+) were performed. The results are very encouraging, since, in most cases, the Box orbitals give better results (giving results of equivalent quality in the worse cases) than do the classical Gaussian orbitals. No spurious effects were encountered.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 411-420, 1997
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  • 151
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    International Journal of Quantum Chemistry 64 (1997), S. 453-458 
    ISSN: 0020-7608
    Keywords: hexisa aqua copper cation ; charge transfer excited states ; 3d→3d excited states ; basis sets ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electronic structure of the ground state and the doublet excited states due to 3d→3d transitions and charge-transfer transitions from ligand to copper of Cu(H2O)62+ are investigated by ab initio calculations. The excited states corresponding to the 3d→3d transitions are calculated to be 1.1-1.4eV above the ground state and this is in good agreement with experiment. The charge-transfer excited states are not so easily determined as are the 3d→3d states, and they are described as an electron transfer from an orbital localized on each water. We have focused our attention on the description of these excited states. The charge-transfer excitations are predicted to start around 6.5 eV for Cu(H2O)62+.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 453-458, 1997
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  • 152
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    International Journal of Quantum Chemistry 64 (1997), S. 497-499 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: No abstract.
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  • 153
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    International Journal of Quantum Chemistry 64 (1997), S. 523-552 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The proper treatment of many-body effects for fermions has long been a goal of theorists working in atomic and molecular physics. The computational demands of such a treatment, however, when coupled to the added difficulties imposed by the presence of external electromagnetic sources, have resulted in few studies of many-body effects in strong magnetic fields, i.e., in the field regime where perturbation theory is no longer applicable. In this article, we review the fundamental aspects of the problem and describe a variety of theoretical approaches for small atoms and molecules in strong fields, beginning with mean-field theory (Hartree-Fock) and progressing through variational and exact stochastic methods.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 523-552, 1997
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  • 154
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    International Journal of Quantum Chemistry 64 (1997), S. 571-580 
    ISSN: 0020-7608
    Keywords: Molecular dissociation ; Zeeman effect ; paramagnetic molecules ; NO2, (O2)2 ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We show that it is possible to control the dissociation energies of molecules with an external magnetic field. We focus our interest on the lowest dissociation channel for which the two atomic and/or molecular products are formed in their ground state. The crucial requirement is the paramagnetic character of at least one of the two dissociation products. Then, an external magnetic field lowers the energy of the paramagnetic species in its lowest Zeeman component and, possibly, the corresponding energy of dissociation of the parent molecule. This it true for diatomic molecules when at least one of the atoms has an odd number of electrons. This is also true for oxygen and phosphorus atoms which have a 3P2 ground state. The Zeeman energy shift of paramagnetic species is always of the order of 1 cm-1 per tesla. The main theoretical difficulty is to determine the correlation diagram existing between the bound states of the parent molecule and the states of the products, or equivalently, how the energy evolves as a function of the internuclear distance corresponding to the dissociation coordinate. Little is known about this evolution, except for diatomic molecules, because the large internuclear distances are difficult to observe experimentally. The main part of the information come from ab initio calculations. For diatomic molecules, the dissociation coordinate is also the unique internuclear distance while for polyatomic molecules, the potential energy surface has 3N-6 coordinates and multidimensional effects should be considered. In any case, the singlet-triplet-quintet, etc… (or doublet-quartet, etc…) interactions should play an important role in the correlation diagram because crossings are expected between singlet and triplet potential energy curves (from short to long internuclear distances) and these interactions transform the crossings into anticrossings. The specific examples of alkali diatomic molecules (Li2, Na2, etc…), of NO2 and of (O2)2 are analyzed in details.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 571-580, 1997
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  • 155
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    International Journal of Quantum Chemistry 64 (1997), S. 629-633 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nuclear magnetic resonance (NMR) line shifts of ortho-hydrogen molecules relative to the lines of hydrogen deuteride (HD) molecules in a para-hydrogen matrix are reviewed in terms of the molecular spectroscopy of the rotational energy levels of ortho-hydrogen molecules in high magnetic fields. This example is used to illustrate how known molecular spectra can be used to determine fundamental interactions in condensed matter, and how similar methods could be used to measure the magnetic fields near astrophysical objects such as white dwarfs and neutron stars.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 629-633, 1997
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  • 156
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    International Journal of Quantum Chemistry 64 (1997), S. 679-687 
    ISSN: 0020-7608
    Keywords: Quantum mechanics ; chemistry ; molecules ; Einstein-Podolsky-Rosen correlations ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: “Quantum mechanics is the first mathematically formulated scientific theory where in a nontrivial way the whole is more than the combination of its parts” (H. Primas, 1982). Nowadays most chemical observations and phenomena are understood on the basis of the molecular point of view. The three-dimensional molecules chemists speak about are micro-entities that as such are subject to a theoretical description in terms of quantum mechanics. Therefore one would expect that also in the molecular domain holistic effects appear which are caused by the well-known Einstein-Podolsky-Rosen (EPR) correlations. In the present study we demonstrate that - the unrestricted validity of quantum mechanics presupposed - such correlation phenomena play an important role in the description of a dissociation reaction A2⇒2A, where an intrinsic (structure establishing) degree of freedom fades into a mere translation of the fragments. Finally we will address the question, why in general EPR correlations are observed quite rarely in the domain of molecules - despite their fundamental importance for the notion of molecule itself.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 679-687, 1997
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  • 157
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    International Journal of Quantum Chemistry 64 (1997), S. 711-719 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: AM1 semiempirical molecular orbital calculations have been performed on the inclusion complexes of β-cyclodextrin (β-CD) with methylated benzoic acids in two orientations, the “head-first” and “tail-first” positions. In the former, the CO2H group points toward the primary hydroxyls of the CD. In the latter, it points away from them. Out of 30 possible inclusion complexes, AM1 results predict only three clearly stable inclusion complexes. These are β-CD with 4-methyl benzoic acid in the head-first position, β-CD with 2,4-dimethyl benzoic acid in the head-first position, and β-CD with 3,5-dimethyl benzoic acid in the tail-first position. The orientations of the stable inclusion complexes correlate with the total number of intramolecular hydrogen bonds and intermolecular hydrogen bonds. The stability of a complex also correlates with the closeness of the host and guest geometries in the complex to their isolated molecule geometries.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 64: 711-719, 1997
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  • 158
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    International Journal of Quantum Chemistry 65 (1997), S. 9-17 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Dyson equation and Green's function formalism map the problem of N electrons in the Born-Oppenheimer nuclear field into a one-electron Schrödinger equation problem in quantum chemistry. The mass operator contains the information about electron correlation, and the ground-state energy, electron affinity, and ionization energy of a molecular system. This pseudopotential approach is combined with the random-phase approximation (RPA) method to give a model with spontaneous symmetry breaking, where the relevant features are incorporated in a transparent way. An effective potential is developed consisting of a Hartree-Fock solution with auxiliary fields to probe for deformation instabilities. The model is then connected to a closely related perturbative propagator approach and linked with the configuration interaction formalism.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 9-17, 1997
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  • 159
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    International Journal of Quantum Chemistry 65 (1997), S. 83-88 
    ISSN: 0020-7608
    Keywords: N8C12 ; heterofullerenes ; ab initio ; geometry optimization ; SCF/MP2 ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The result of an ab initio investigation on the hypothetical system N8C12 is presented. This is a fullerene-like structure with Th symmetry. Calculations have been performed at self-consistent field (SCF), second-order Møller-Plesset (MP2), and density functional theory (DFT) level, using three different basis sets: minimal (STO-3G), Valence Double Zeta (VDZ), and (at SCF level only) VDZ plus polarization (VDZP). Second-order analytical derivatives have been computed with the STO-3G basis set and the frequencies obtained are all real. The results indicate that, at this level of description, this hypothetical structure is a local minimum on the potential energy surface.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 83-88, 1997
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  • 160
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    International Journal of Quantum Chemistry 65 (1997), S. 121-126 
    ISSN: 0020-7608
    Keywords: Energy partitions ; molecular orbital localization ; aromaticity ; basicity ; pyrazole ; imidazole ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electronic energy partitionings resulting from the classification of occupied molecular orbitals in disjoint subsets are seen to be consistent with localization procedures preserving that classification, regardless of the treatment given to the crossing terms between different subsets. To illustrate the utility of this result, the electronic energies of pyrazole and imidazole are partitioned into σ- and π-localized molecular orbital energy contributions, and the results are related with the aromaticity and basicity differences between both heterocycles.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 121-126, 1997
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  • 161
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    International Journal of Quantum Chemistry 65 (1997), S. 159-165 
    ISSN: 0020-7608
    Keywords: Dynamic Lie algebraic method ; inelastic collision between two diatomic molecules ; vibrational transition probabilities ; vibrational energy transfer ; selection rules for the transitions ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We present the quantum mechanical studies on the vibrational energy transfer in the inelastic collinear collision between two diatomic molecules using a dynamic Lie algebraic method of Alhassid and Levine [Phys. Rev. A 18, 89 (1978)] within the semiclassical approximations. A dynamical algebra h15 is formed and used for calculating the transition probabilities and the expectation values of the interaction potential. Under the first-order approximation of the group parameters, the selection rules for the transitions among the vibrational levels have been obtained.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 159-165, 1997
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  • 162
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    International Journal of Quantum Chemistry 65 (1997), S. 199-204 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new method for construction of characteristic polynomials (CP) of complicated graphs having arbitrary edge and vertex weights has been developed. The method first converts the graph into isospectral linear chains with weighted vertices and edges and then builds up the CP coefficients recursively. Two types of graphs have been used for illustration, viz., (i) graphs that can be linearized by symmetry factorization and (ii) graphs without symmetry which are to be linearized by an algorithm involving walks of unit length. Both types have been illustrated, of which type (i) includes the Schlegel of fullerene fragment C20 and another large graph with many fused rings.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 199-204, 1997
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  • 163
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    International Journal of Quantum Chemistry 65 (1997), S. 241-256 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A rigorous approach of density functional theory (DFT) for open-shell multifermionic systems is devised, using a local-scaling transformation (LST) scheme involving a single scalar function f(r). Within the orbit θN induced by a model wave function (MWF) _Ψ, the total energy of space or spin degenerate or nondegenerate states is expressed as an exact functional of the single-particle density ρ(r). In the first step, it is shown how the reduced density functions and matrices (RD Fs and Ms) of any order (s=1,…,N-1) of an (open or closed) N-fermion system can be expressed as functionals of the one-fermion charge density. The spatial components (which depend on the spin configuration of the fermions) of the RD Fs and Ms of orders 1 and 2, and the resulting charge and spin distribution and correlation densities, are functionals of the one-fermion charge density. We form the manifolds of the charge and spin distribution and correlation energy functionals, from which the theory can be extended to degenerate states of a spinless Hamiltonian. For multielectronic systems, the spin densities and spin-pair correlations as well as the spin-orbit and spin-spin interactions are determined by the function ρ(r). In the second step, it is shown how the expectation values of s-particle operators, in particular those of spin-including mono- and biparticle operators, are functionals of the monoparticle density ρ(r). We give general expressions for the expectation values of spin-free, spin-field, spin-orbit and spin-spin interaction operators in degenerate states. We show how to express the energy functional of the spin manifolds of a system described by a Schrödinger Hamiltonian. The use of an LST, which preserves spin symmetry, to build this functional must fulfill certain conditions in order to maintain the space symmetry of the system. We investigate the dependence of the Weizsaecker and extended Thomas-Fermi kinetic energy terms and of the Coulomb attraction, repulsion, and exchange potential energy terms on the choice of the MWF, i.e., on the induced orbit and on the spin configuration of the system.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 241-256, 1997
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  • 164
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    International Journal of Quantum Chemistry 65 (1997), S. 299-304 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In Article I, we showed that the freeon-exchange theory of magnetic coupling is a viable alternative to the widely used spin-exchange theory. In Article II, we are concerned with the symmetric-bridge, molecular magnet, AXB, where A and B are magnetic atoms and X is the bridge. The symmetric-bridge molecular magnet is of particular interest because the major features of its spectrum and its coupling constants are obtained by means of the two-electron, two-site freeon theory. We exhibit one example of ferromagnetic coupling, J〉0 and one of antiferromagnetic coupling, J〈0.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 299-304, 1997
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  • 165
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    International Journal of Quantum Chemistry 65 (1997), S. 377-377 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: No abstract.
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  • 166
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    International Journal of Quantum Chemistry 65 (1997), S. 389-398 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In probability theory an event is characterized by a set of outcomes. The probability of an event is a prediction of the relative frequency of the outcomes that lie in the set, when the experiment is repeated independently. In quantum mechanics an event is identified with a closed subspace of Hilbert space. Do the probabilities of quantum events predict relative frequencies in the same way? The famous analysis of Bell shows that this cannot happen in general, for all quantum events. Nevertheless the probabilities must predict something, and if not relative frequencies then what? There are several answers to the question of how to interpret quantum probabilities as relative frequencies, but they all involve restrictions on the events that are considered. This article surveys three such interpretations, which correspond to three possible choices: measured events, macroscopic events, and position events.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 389-398, 1997
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  • 167
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    International Journal of Quantum Chemistry 65 (1997), S. 439-451 
    ISSN: 0020-7608
    Keywords: CASVB ; modern VB ; nonorthogonal orbital optimization ; multiconfiguration spin-coupled ; CASSCF ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We outline the CASVB strategy, which may be used either to generate very compact modern valence bond representations of CASSCF wave functions or to optimize general types of modern VB wave function. A simple algorithm is presented for the elimination of redundant or constrained parameters from the appropriate second-order optimization problems. Selected results for three systems - benzene, the allyl radical, and LiH - are used to illustrate various ways in which CASVB procedures can be used to perform fully variational optimizations of nonorthogonal orbitals and structure coefficients in modern VB wave functions.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 439-451, 1997
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  • 168
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    International Journal of Quantum Chemistry 65 (1997), S. 477-486 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A multigrid method for numerically solving electrostatics and quantum chemical problems in real space is discussed. Multigrid techniques are used to solve both the linear Poisson equation and the nonlinear Kohn-Sham and Poisson-Boltzmann equations. The electrostatic potential, Laplacian, charge densities (electrons and nuclei), Kohn-Sham DFT orbitals, and the self-consistent field potential are all represented discretely on the Cartesian grid. High-order finite differences are utilized to obtain physically reasonable results on modestly sized grids. The method is summarized and numerical results for all-electron atomic and molecular structure are presented. The strengths and weaknesses of the method are discussed with suggested directions for future developments, including a new high-order conservative differencing scheme for accurate composite grid computations which preserves the linear scaling property of the multigrid method.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 477-486, 1997
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  • 169
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    International Journal of Quantum Chemistry 65 (1997), S. 655-663 
    ISSN: 0020-7608
    Keywords: Fullerenes ; endohedral complexes ; rotational spectroscopy ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We propose a two-parameter model Hamiltonian to analyze the low-energy dynamics of endohedral C60 fullerene complexes such as Li+@C60, Na+@C60, CO@C60, LiF@C60, and LiH@C60. The simplicity of the model is a direct consequence of very strong constraints imposed by both high symmetry and close confinement conditions, on the spherical anisotropy of the guest-cage interaction. In the parameter space region expanded by the selected systems, the guest low-energy dynamics undergo transitions from almost free rotations to more or less hindered rotations. These dynamics produce very particular features in the low-temperature rotational spectra, which can be taken, therefore, as fingerprints of a particular guest-cage interaction.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 655-663, 1997
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  • 170
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    International Journal of Quantum Chemistry 65 (1997), S. 651-654 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Both theoretical and experimental studies in the past have indicated that the charge transport in doped polyacetylene is due primarily to traveling charged solitary waves along the polymer chain backbone accompanied by hopping from one chain to another. The conductivity in this model is still determined by a band gap. The nature of the ground and excited states of the doped system, however, is not fully understood. Previous ab initio calculations, based on transoctatetraene simulating transpolyacetylene interacting with a single iodine atom and also a fairly low level of basis set, have pointed to the possibility that, while the calculations at the Hartree-Fock level puts the charge-transfer state below the “covalent” state, the results are reversed when correlation is included. Apart from the basis-set inadequacy and the small size of the polyene considered in this study, it is also true that, in solution, iodine exists only as polyiodide ions I3-, I5-, etc. In this work, we address some of the above deficiencies of the model.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 651-654, 1997
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  • 171
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    International Journal of Quantum Chemistry 65 (1997), S. 697-707 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Explicit expressions of polarizability and hyperpolarizability are formulated by a path integral method in terms of the generalized coherent states of the Thouless parametrization. A novel scheme is shown for calculating the molecular properties including total energy, and the Monte Carlo method using the metropolis algorithm is utilized for performing the actual calculations. As a simple example, the hydrogen molecule is examined to demonstrate performances of the present scheme. We discuss improvement of the accuracy of the (hyper)polarizabilities depending on the number of the division for the partition function and also the behaviors of the (hyper)polarizability for the external magnetic field. We compare the present results with those obtained by the conventional molecular orbital theory.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 697-707, 1997
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  • 172
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    International Journal of Quantum Chemistry 65 (1997), S. 767-785 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Molecular orbital calculations were carried out for the dimerization step in the polymerization process of vinyl acetate and styrene through free radicals and ionic mechanisms. The calculations were performed for monomers, dimers, their positive and negative ions, and free radicals. The minimum-energy geometry is achieved in all cases, the geometrical and electronic parameters are analyzed, a dimerization reaction pathway is proposed, and the heats of polymerization obtained are in excellent agreement with experimental data.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 767-785, 1997
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  • 173
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    International Journal of Quantum Chemistry 65 (1997), S. 759-765 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The results of ab initio post-Hartree-Fock study of the molecular structures, relative stabilities, and Hartree-Fock level calculations of IR frequencies and intensities for mono- and dihydrated oxo-amino-tautomers of guanine are reported. The geometries of the local minima were optimized without symmetry restrictions at the second-order Møller-Plesset perturbation theory. The standard 6-31 G(d) basis set was used. Local minima were verified by calculations of the matrix of energy second derivatives [Hessian at the HF/6-31 G(d) level]. The single-point calculations were also performed at the MP4(SDQ)/6-31G(d)//MP2/6-31G(d) and MP2/6-31++G(d, p)//MP2/6-31G(d) levels of theory. The total energies were corrected for the zero-point energy contributions scaled by a factor of 0.9. The structural parameters of mono- and dihydrated complexes were analyzed and related to the characteristics of hydrogen bonds. We found that the interaction of guanine tautomers with two water molecules changes the order of the gas-phase stability: 7GUA≈9GUA into the order which corresponds to the stability of the guanine tautomers in the polar solvent: 9GUA≫7GUA. The predicted IR HF/6-31G(d) level frequencies and intensities are presented.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 759-765, 1997
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  • 174
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    International Journal of Quantum Chemistry 65 (1997), S. 803-816 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Molecular dynamics simulations of clusters of Li+ and Be2+ cations with up to 12 water molecules were performed calculating the particle trajectories using Hartree-Fock-derived forces. It was found that independent of the starting configuration tetrahedral clusters are obtained in less than 1 ps. Only for Li+ clusters, transition states with five and three water molecules are found. We discuss the structures of the clusters and the vibrational dynamics of the water molecules and compare them with other ab initio simulations, with simulations using analytical potential functions, and with static calculations. Water-dissociation (hydrogen transfer) reactions which take place at elevated temperatures were investigated.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 803-816, 1997
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  • 175
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    International Journal of Quantum Chemistry 65 (1997), S. 787-801 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction mechanism and relative stabilities of the intermediates and transition states in the reaction of 1O2 plus ethylene molecule using ab initio molecular orbital (MO) theories at several levels of theory with the correction of the nondynamic and dynamic electron correlation effects were systematically investigated. Full geometry optimizations of the corresponding biradical (BR) intermediates, perepoxide (PE) and 1,2-dioxetane (DO) were performed by complete-active-space CASSCF{2,2}/6-31G* method with nondynamic electron correlation effect and Møller-Plesset MP2/6-31G* method with dynamic electron correlation effect. For the 1,4-biradical intermediates, new gauche-type 1BR state was found at both CASSCF and MP2 levels, corresponding to the transition state of the rotation motion of the O2 moiety. It was found from the intrinsic-reaction-coordinate (IRC) study that another gauche-type 1BR transition state connects smoothly to the reactant system 1O2+H2C(DOUBLE BOND)CH2 and the gauche minimum 1BR state, showing that the reaction through the 1,4-biradical intermediates initially proceeds through the gauche transition state to form the gauche minimum 1BR state, following that the free rotation of O2 moiety occurs due to the energy barrier less than 4.0 kcal/mol. The stability of the perepoxide is surprisingly sensitive to the levels of the theory and the basis sets employed. The coupled-cluster methods, CCSD and CCSD(T), gave the reasonable stabilities of 1,4-biradical intermediates, perepoxide, and dioxetane as a reaction product. From the results of the CCSD and CCSD(T) methods, the reaction of 1O2+H2C(DOUBLE BOND)CH2 proceeds by a two-step mechanism through the 1,4-biradical intermediates rather than through the perepoxide.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 787-801, 1997
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  • 176
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    International Journal of Quantum Chemistry 65 (1997), S. 827-838 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A general strategy for computing the vibrational frequencies of adsorbates on surfaces is presented. Rather than use numerical fits to the surface energy, we advocate diagonalizing a mass weighted energy second-derivative matrix. The computation of energy derivatives has several advantages: It facilitates a more accurate treatment of the adsorbate/substrate mass ratios. The normal modes of the surface vibrations are given automatically in the diagonalization step. Finally, a major advantage of using energy derivatives is that they provide estimates of the range of the adsorbate/substrate interactions which can be used to ensure that the frequency values are converged. We illustrate the strategy for cluster calculations which simulate the H/Al(100), O/Al(111), H2O/Al(111), and Al/Si(111) surfaces.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 827-838, 1997
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  • 177
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    International Journal of Quantum Chemistry 65 (1997), S. 817-826 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The geometry and vibrational spectrum of TeCl4 was calculated with various quantum chemical methods [Hartree-Fock, second-order Møller-Plesset (MP2) and generalized gradient approximation density functional theory (GGA-DFT)]. Five different basis-set combinations were tested: the relativistic effective core potentials with double-zeta split valence basis (RECP) of Hay & Wadt (HW) and Stevens et al. (CEP); the above RECP basis sets extended with polarization functions for Te and using a 6-31G* basis for Cl (HW* and CEP*); a medium-size all-electron basis set (ALL). The quality of the calculated data was assessed by comparison with recent experimental results. The Hartree-Fock method combined with the HW and CEP basis sets provided a very good approximation of the experimental vibrational spectra. The quality of the results is comparable to those of the best methods (MP2, B3-P, B3-PW with HW* and CEP* and B3-LYP, B3-P, B3-PW with the ALL basis set). However, the HW and CEP basis sets provided very poor geometry and vibrational frequencies when they were used in combination with any correlated method in this work. Similarly, the DFT methods using Becke's 1988 exchange functional (B-LYP, B-P, B-PW) without the inclusion of the exact exchange let to very poor results with the basis sets used in this study.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 817-826, 1997
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  • 178
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    International Journal of Quantum Chemistry 65 (1997), S. 857-865 
    ISSN: 0020-7608
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have developed procedures for determining the potential, electron density, and current at a planar metal surface with an applied static field in vacuum. These calculations are made using density-functional theory within the local density approximation (LDA) for the Kohn-Sham exchange and correlation. Several different techniques were compared including the use of different expressions for the exchange and correlation energies. The steady-state response of field emission to a laser is found using Floquet methods to solve the dipole approximation of the time-dependent Schrödinger equation with the static potential obtained from density-functional theory. These simulations show that there is a resonance in the response that causes a significant increase in the tunneling current. This resonance occurs for electrons that are promoted above the barrier by absorbing quanta from the laser when the line integral of the momentum between the turning points is equal to h/2.   © 1997 John Wiley & Sons, Inc. Int J Quant Chem 65: 857-865, 1997
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  • 179
    ISSN: 0006-3525
    Keywords: chemotaxis ; conformation ; crystal structure ; Cα-tetrasubstituted amino acids ; formylpeptides ; 2-[2′-(methylthio)ethyl]methionine ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The new Cα-tetrasubstituted α-amino acid residue 2-[2′-(methylthio) ethyl]methionine (Dmt) has been introduced into the reference chemotactic tripeptide HCO-Met-Leu-Phe-OMe (fMLP-OMe) in place of the leucine or methionine, respectively. The biological activity of the new analogues [Dmt2] fMLP-OMe (2) and [Dmt1] fMLP-OMe (3) has been determined; whereas 2 is active toward human neutrophils, stimulating directed migration, superoxide anion generation, and lysozyme release, 3 results practically inactive in all tested assays. A conformational analysis on 2 and 3 has been performed in solution by using ir absorption and 1H-nmr. The conformation of 2 was also examined in the crystal by x-ray diffraction methods. Both 2 and 3 adopt fully extended conformation in correspondence with the Dmt residue. Biological and conformational results are discussed and compared with related previously studied models. © 1997 John Wiley & Sons, Inc. Biopoly 42: 415-426, 1997
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  • 180
    ISSN: 0006-3525
    Keywords: x-ray diffraction ; crystal structure ; dehydrophenylalanine ; constrained peptides ; 310-helix ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An Nα-protected model pentapeptide containing two consecutive ΔPhe residues, Boc-Leu-ΔPhe-ΔPhe-Ala-Phe-NHMe, has been synthesized by solution methods and fully characterized. 1H-nmr studies provided evidence for the occurrence of a significant population of a conformer having three consecutive, intramolecularly H-bonded β-bends in solution. The solid state structure has been determined by x-ray diffraction methods. The crystals grown from aqueous methanol are orthorhombic, space group P212121, a = 11.503(2), b = 16.554(2), c = 22.107(3) Å, V = 4209(1) Å,3 and Z = 4. The x-ray data were collected on a CAD4 diffractometer using CuKa radiation (λ = 1.5418 Å). The structure was determined using direct methods and refined by full-matrix least-squares procedure. The R factor is 5.3%. The molecule is characterized by a right handed 310-helical conformation (〈φ〉 = -68.2°, 〈ψ〉 = -26.3°), which is made up of two consecutive type III β-bends and one type I β-bend. In the solid state the helical molecules are aligned head-to-tail, thus forming long rod like structures. A comparison with other peptide structures containing consecutive ΔPhe residues is also provided. The present study confirms that the -ΔPhe-ΔPhe-sequence can be accommodated in helical structures. © 1997 John Wiley & Sons, Inc. Biopoly 42: 373-382, 1997
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  • 181
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    Biopolymers 44 (1997), S. 3-21 
    ISSN: 0006-3525
    Keywords: RNA ; x-ray crystallography ; crystal structure ; transfer RNA ; ribozyme ; catalytic RNA ; internal loop ; review ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The current state of three-dimensional structure analysis of RNA by x-ray crystallograpy is summarized. The methods of sample preparation, crystallization, data collection, and structure solution are discussed, followed by a review of the RNA structures that have been determined and of common structural features, and finally, an appraisal of future prospects for x-ray crystal structure analysis of RNA. © 1997 John Wiley & Sons, Inc. Biopoly 44: 3-21, 1997
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  • 182
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    Journal of Polymer Science Part B: Polymer Physics 35 (1997), S. 1533-1543 
    ISSN: 0887-6266
    Keywords: polysilane ; lamellar microstructure ; crystal structure ; crystallization kinetics ; Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The thermal behavior and physical structure of atactic poly(methyl-n-propylsilane) (PMPrS) have been investigated by complementary techniques. Temperature-dependent wide-angle X-ray scattering as well as thermal analysis clearly indicate that atactic PMPrS crystallizes below 40°C in a monoclinic lattice with PMPrS adopting an all-trans planar zigzag conformation. Above 40°C, the polymer is in the isotropic amorphous state. A restricted analysis of the structure factors of PMPrS has been performed, indicating that the zigzag planes most probably lie in (110) planes. The chains pack with little interpenetration, and the crystals may be considered as bundles of long, closely packed prisms. The restricted interlocking of neighboring chains results, in turn, in a poor register of the chains along the c-axis. Moreover, transmission electron microscopy reveals that the crystallized polymer adopts a lamellar microstructure, with parallel lamellae tending to form tight bundles. Both electron microscopy and small-angle X-ray scattering indicate crystal thicknesses of about 60 Å. Finally, PMPrS was found to crystallize with a nucleation-controlled type of kinetics. Avrami exponents were calculated as n ≈ 1, suggesting a fibrillar growth geometry compatible with the absence of spherulitic superstructure. A double-melting behavior is also observed for PMPrS. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 35: 1533-1543, 1997
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  • 183
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    Journal of Polymer Science Part B: Polymer Physics 35 (1997), S. 1575-1588 
    ISSN: 0887-6266
    Keywords: poly(naphthalic anhydride) ; crystal structure ; electron diffraction ; confined thin film melt polymerization ; Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Single crystals of poly(naphthalic anhydride) (PNA) have been grown using our confined thin film melt polymerization technique. Lamellae, 70-100 Å thick, are found for the crystals polymerized at 180°C with thinner lamellae for a 200°C polymerization temperature. In addition, irregular lath-shaped crystals are found for both polymerization temperatures, apparently formed by a solid-state polymerization process within the original needle-like monomer crystals. The crystal structure of PNA has been studied by electron diffraction (ED) and computer modeling based on seven different zonal ED patterns. It is found that, in most cases, two or three different zonal patterns are superimposed with a common plane, suggesting variable chain tilting even in individual lamellae. Shearing of the material shortly after the initiation of polymerization, permitted obtaining an additional [010] zone ED pattern. A monoclinic unit cell with one chain, two repeat units is proposed based on measurements of 21 independent reflections; the space group is Pc11; a = 6.26 Å, b = 4.33 Å, c = 18.60 Å, and α = 122.5°. The computer-simulated (Cerius2) molecular conformation and chain packing are described with the corresponding simulated electron diffraction patterns being in good agreement with the observed ones. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 35: 1575-1588, 1997
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  • 184
    ISSN: 0947-6539
    Keywords: crystal structure ; cyclobutenes ; nickel ; radialenes ; radical reactions ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction of hexakis(dibromomethyl)benzene with [(Bu3P)2-Ni(COD)] (COD = 1,5-cyclooctadiene) in DMF at 65-70°C yielded a mixture of the title compounds. The mixture was separated by column chromatography to yield hexabromotricyclobutabenzene (3 a) and hexabromohexaradialene (4) in 24 and 16% yields, respectively. 1H and 13C NMR spectroscopy suggest that 3 is obtained as the syn-all-trans isomer 3 a, and the symmetric anti-all-trans isomer 3 b is not obtained at all. The X-ray structures of 3 a and 4 are reported. The hexaradialene 4 has a chair conformation, and deviates from planarity by 43.6°. Heat or radical impurities cause the clean transformation of 3 a to 4.
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  • 185
    ISSN: 0947-6539
    Keywords: cadmium ; crystal structure ; hydrothermal synthesis ; hydroxyphosphate ; molybdenum ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Two new molybdenum(v) hydroxyphosphates have been synthesized hydrothermally, Na2Cd3(Mo2O4OH)6-(PO4)2(PO3OH)6[N(CH3)4]4·10H20 (1) and Cd9(Mo2O4OH)12(PO4)6(PO3OH)10-[N(CH3)4]8·15H2O (2). Their structures have been determined from single-crystal X-ray diffraction. The water molecules and hydroxyl groups have been deduced from valence calculations. Both compounds crystallize in the triclinic space group P1, with the cell parameters for 1 a = 12.340(2), b = 12.596(1), c = 14.717(2) Å, α = 107.24(1)°, β = 89.83(1)°, γ = 114.31(1)°, V = 1972.3(4) Å3, and for 2 a = 11.942(1), b = 13.339(2), c = 26.765(3) Å, α = 85.33(1)°, β = 86.87(1)°, γ = 64.08(1)°, V = 3821.3(9) Å3. The two frameworks can be described on the basis of similar [Mo6P4X31]n- (X = O, OH) anionic clusters, but 1 is a tridimensional structure, whereas 2 exhibits a monodimensional structure.
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  • 186
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    Journal of Polymer Science Part B: Polymer Physics 35 (1997), S. 1807-1820 
    ISSN: 0887-6266
    Keywords: poly(p-oxybenzoate) ; confined thin film melt polymerization ; epitaxy ; mica substrate ; morphology ; crystal structure ; Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Polymerization of p-acetoxybenzoic acid between mica sheets, from both the melt and dilute solution, in a wide range of polymerization temperatures (180-400°C) yields an epitaxial-like overgrowth of PpOBA on the mica cleavage surface. The PpOBA overgrowth forms long rows by lateral aggregation of ribbon crystals situated in three substrate directions rotated by 60°. The c-axes of the PpOBA phase I and II lattices are parallel to the 001 plane of the mica, coinciding with the a-axes of the mica hexagonal structure. The aI- and bII-axes lie predominantly on the mica surface. The surface-orienting effect is tentatively attributed to surface steps and or/polar effects; lattice matching does not occur. The recrystallization of bulk polymer samples previously prepared also leads to ordering between mica like that in melt or solution polymerization. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 35: 1807-1820, 1997
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  • 187
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    Journal of Polymer Science Part B: Polymer Physics 35 (1997), S. 623-630 
    ISSN: 0887-6266
    Keywords: ultra-high modulus and molecular weight polyethylene fibers (UHM-WPE) ; high-temperature wide-angle x-ray diffraction (HTWAXD) ; crystal structure ; orthorhombic/monoclinic/pseudohexagonal transformation ; annealing and thermal behavior ; Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Wide-angle x-ray diffraction (WAXD) of the ultra-high modulus and molecular weight polyethylene (UHMWPE) fibers at room temperature shows a predominantly orthorhombic structure with trace amount of nonorthorhombic crystals and very low amorphous contents. The calculated unit cell dimensions a and b of the orthorhombic crystals are 7.36 (±0.04) Å, and 4.89 (±0.04) Å, respectively. The apparent crystallite sizes perpendicular to the orthorhombic 110 and 200 reflection planes are 169.8 and 143.4 Å, respectively. The crystallite size perpendicular to the nonorthorhombic 010 reflection is 149.4 Å. The crystal density is calculated to be 1.02 g/cc. With increasing temperature, the thermal expansion coefficient in the a direction is much higher than that in the b direction which explains the structural transformation from the orthorhombic crystals to a pseudohexagonal form. Tension along the fiber axis while being heated during the high-temperature x-ray diffraction (HTWAXD) scanning has shown enhanced structural transformation from the orthorhombic form to the monoclinic form. Structural transformation from the orthorhombic form to the pseudohexagonal phase is not observed on the UHMWPE fibers under axial tension or annealing conditions in HTWAXD. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys, 35: 623-630, 1997
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  • 188
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    Journal of Polymer Science Part B: Polymer Physics 35 (1997), S. 2511-2521 
    ISSN: 0887-6266
    Keywords: isotactic poly(propylenes) ; unit-cell density ; crystal structure ; unit-cell parameters ; Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The lattice parameters of a series of monoclinic metallocene poly(propylenes) of constant molecular weight are measured as a function of defect content, that vary between 0.3 and 2.35 total defects per 100 monomeric units. The parameters are also measured as a function of molecular weight for a fixed defect content and as a function of the crystallization temperature. The b axis is found to increase with decreasing isothermal crystallization temperature whereas only small changes are found for samples rapidly crystallized. The a and c axis showed basically no variation with crystallization temperature. The parameters of the unit cell were essentially constant with varying defect content in the poly(propylene) chain. Lack of observed effect on the dilation of the unit cell by increasing defects is a consequence of the rapid crystallization required to ensure formation of monoclinic crystals. The unit cell parameters increased as a mild function of the molecular weight. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 35: 2511-2521, 1997
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  • 189
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    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 3-21 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Monochloroalkanes were studied using molecular mechanics and parameters were developed and incorporated into MM3. The new force field reproduces well molecular structures, conformational energy differences and vibrational frequencies. The compounds studied were methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, neopentyl, cyclopentyl and cyclohexyl chloride, 4-tert-butyl-1-chlorocyclohexane and 1-chloroadamantane. The overall rms error for the averaged C - C and C - Cl bond lengths for the above set of compounds excluding sec-butyl chloride, neopentyl chloride and 1-chloroadamantane is 0·0047 Å, and the rms error for the vibrational frequencies is 377thinsp;cm-1. The moments of inertia (rg) are approximately 1% greater than the microwave values (ra0). Thermodynamic quantities are also compared with those observed using various experimental methods. © 1997 John Wiley & Sons, Ltd.
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  • 190
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    Journal of Physical Organic Chemistry 10 (1997), S. 27-32 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: 1,3-Dihydro-1-oxido-3-methyl-1,2,3-benziodoxaphosphole 3-oxide (4) and 1-H-1-oxido-5-methyl-1,2,3-benziodoxathiole 3,3-dioxide (5) were used to cleave p-nitrophenyl diphenyl phosphate (PNPDPP) (2) in aqueous micellar cetyltrimethylammonium chloride (CTACI) in phosphate buffer at pH 8. The maximum pseudo-first-order cleavage rate constants (with 1·0×10-4 M 4 or 5 and 1·0×10-5 M 2) were 0·0016 s-1 for 4 ([CTAC1]=0·01 M) and 0·0013 s-1 for 5 ([CTAC1]=0·001 M). Reagents 4 and 5 were, respectively, 44 and 57 times less reactive toward PNPDPP than iodosobenzoate (1) under comparable conditions. Ab initio electronic structure calculations were carried out on 1, 4 and 5 and their protonated forms. Calculated structural parameters were compared with crystallographic data where possible. The computed atomic net charge on the oxido oxygens of 1, 4 and 5 was found to track the reactivity toward PNPDPP. © 1997 John Wiley & Sons, Ltd.
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  • 191
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The 13C chemical shifts of eight series of para- or meta-substituted benzaldehyde 2-aminobenzoylhydrazones possessing both amide and imine functionalities were measured. The 13C chemical shifts were used to study the transmission of electronic substituent effects along the heteroaromatic side-chain of the substituted aromatic ring. In addition to the C=N bond, the benzoylhydrazones possess in their side-chain polarizable C=O and phenyl π-units. The benzylidenic ring-substituent chemical shifts were analysed by the dual substituent parameter approach to separate the inductive and resonance effects. The negative ρI and ρR values observed (i.e. reverse substituent effects) indicate a significant π-polarization of the C=N bond. The highly negative ρR values, especially those in the case of meta substitution, suggest a contribution from a marked secondary field-transmitted resonance effect. The results are compared with those obtained for other hydrazones or imines. Variation of the electron-withdrawing ability of the N2 substituent is seen to have a systematic effect on the ρI values. Reverse substituent effects are also observed at the C-1″ site of the 2-aminobenzoyl ring while C-4″ shifts show normal behaviour, consistent with the general concept of the π-polarization that each π-unit of the side-chain is polarized largely as a localized system. Accordingly, the π-polarization effect is seen efficiently to propagate also along a heteroaromatic chain. On the other hand, the C=O sites exhibit normal, although fairly slight, dependence on the benzylidenic substituent indicating an insignificant role of π-polarization at that site. The effects of the solvent, CDCl3 vs. DMSO-d6, on the ρI and ρR values are also considered. © 1997 John Wiley & Sons, Ltd.
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  • 192
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    Journal of Physical Organic Chemistry 10 (1997), S. 42-48 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Two new π* indicators of solvent dipolarity and polarizability were synthesized and characterized with respect to their solvatochromic and acid-base properties. The new dyes, N,N-dipropyl-p-nitroaniline and N,N-dibutyl-p-nitroaniline, are part of a homologous structural series of indicators with increasing lipophilic character, ranging from N,N-dimethyl-p-nitroaniline to N,N-dibutyl-p-nitroaniline. The new indicators are designed as specific polarity probes for the characterization of aqueous-organic interfacial systems. Visible absorption spectra for N,N-dipropyl-p-nitroaniline and N,N-dibutyl-p-nitroaniline show solvent-dependent bandshapes in a manner similar to that of the previously characterized diethyl species. Values of -s decrease slightly from N,N-diethyl-p-nitroaniline to N,N-dipropyl-p-nitroaniline, leveling off with increasing alkyl chain length. The trend in pKBH+ for the p-nitroanilinium ions over the range from N,N-dimethyl- to N,N-dibutyl- is consistent with known trends for the corresponding anilinium ions. © 1997 John Wiley & Sons, Ltd.
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  • 193
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    Journal of Physical Organic Chemistry 10 (1997), S. 33-41 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---A series of representative organic acyclic and cyclic sulfur diimides were studied by Hartree-Fock-plus-correlation ab initio quantum chemistry and by density functional theory using Becke's three-parameter functional along with the LYP functional. The widely used formula representation -N=S=N- for these compounds suggests octet expansion of sulfur. This is not confirmed by theory. Although d-polarization functions significantly improve the numerical results, sulfur d-orbitals are hardly occupied. The calculated electronic charge distribution derived by population analysis and by the atoms-in-molecules topological theory favors charge separation resulting in a more or less ylidic structure with -N=S+-N-- and -N-=S+-N- resonance contributors. This structure does not exclude relatively short SN bond lengths. The characteristics of the bonds in the parent structures is preserved in some non-Kekulé-type NSN heterocyles. Strong SN bond charge separations of organyl sulfur diimides are accompanied by short SN bond distances and narrow S0/T1 and S0/S1 energy gaps. The experimentally well known naphtho[1,8-cd][1,2,6]thiadiazine and the unknown 3,4-dimethylene-1,2,5-thiadiazole belong to this series. The calculations confirm that 1,2,3-thiadiazole is the diaza analog of thiophene rather than the vinylene-bridged sulfur diimide, while more complex heterocycles such as benzo[1,2-c;4,5-c′]bis[1,2,5]thiadiazole take an intermediate position between classical and non-classical structures. Two closely related minimum structures are defined on the DFT Born-Oppenheimer energy surface of naphtho[1,8-cd;4,5-c′d′]bis[1,2,6]thiadiazine, but so far only one compound is experimentally known. The lowest energy structure is the quinoid form corresponding to the experimentally known compound. © 1997 John Wiley & Sons, Ltd.
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  • 194
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    Journal of Physical Organic Chemistry 10 (1997), S. 167-174 
    ISSN: 0894-3230
    Keywords: electrostatic interaction energies ; dipole moments ; hydrogen bond basicity ; nitriles ; ammonia ; amines ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Experimental molecular dipole moments and related bond and mesomeric moments were used to calculate the energy WA of the electrostatic attraction between N-containing acceptor molecules and the attracted H atom, the hydrogen bond N···H being along the symmetry axis of N. A satisfactory but family-dependent linear relationship is obtained between WA and the hydrogen-bond basicity scale pKHB in 36 nitriles, ammonia and 11 primary and tertiary amines. The energy WR of the electrostatic repulsion between the acceptor molecule and the moment of the created N⇐H bond is calculated in a similar way. WR is strongly family dependent but the total energy WA+WR is closely correlated with pKHB in the 48 derivatives studied without a significant family dependence. This analysis clarifies and completes a previous similar study and confirms that dipolmetry and classical electrostatic calculations can be a useful and practicable method for the prediction of the strength of hydrogen bonding. © 1997 by John Wiley & Sons, Ltd.
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  • 195
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    Journal of Physical Organic Chemistry 10 (1997), S. 917-924 
    ISSN: 0894-3230
    Keywords: nitrenium ion ; pyridinium salts ; photochemistry ; singlet states ; triplet states ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The photochemical reactions of N-(methylphenylamino)-2,4,6-trimethylpyridinium tetrafluoroborate were studied to find evidence of photodecomposition to a nitrenium ion reactive intermediate. Stable products were formed that were consistent with a singlet-state methylphenylnitrenium ion precursor. The methoxy and chloro adducts. N-methyl-p-anisidine and 4- (and 2-)chloro-N-methylaniline, were identified and quantified by high-performance liquid chromatographic analysis. A hydride shift from the N-methyl group of the nitrenium ion is also proposed based on the detection of aniline which would result from hydrolysis of the iminium ion rearrangement product. The rate constant for this rearrangement is estimated to be 108 s-1. The reduction product, N-methylaniline, is produced, and is believed to form, at least in part, from the hydrogen atom abstractions of the triplet nitrenium ion. This is supported by the results of triplet sensitized irradiations. Laser flash photolysis studies yielded the transient spectrum of a long-lived intermediate absorbing at 470 nm. This transient species is believed to be the cation radical of N-methylaniline. © 1997 John Wiley & Sons, Ltd.
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  • 196
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    Journal of Physical Organic Chemistry 10 (1997), S. 885-897 
    ISSN: 0894-3230
    Keywords: potassium and lithium methods ; reactivity ; ab initio studies ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Using propene as a model reference system, the reactivity of potassium and lithium methides in metal-hydrogen exchange and nucleophilic addition to the double carbon-carbon bond was investigated. These extreme models, which imply a tight interaction of the organic anion with its counterion, were compared with the corresponding free anion reactions, which provide the opposite extreme situation. The lithium system appears to be more inclined toward nucleophilic addition, whereas the potassium system would more readily undergo a metallo-dehydrogenation reaction. The results appear to be consistent with available experimental evidence and allow a qualitative rationalization of the different basic strengths and nucleophilicities of Li and K alkyls. As an ancillary but interesting result, the hydrogen transfer reactions see a significant amount of electron density located on the transferred hydrogen in the transition structure; this process can hardly be defined as a proton abstraction operated by the strong base. © 1997 John Wiley & Sons, Ltd.
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  • 197
    ISSN: 0894-3230
    Keywords: multinuclear magnetic resonance ; molecular mechanics ; MM3 ; conformation ; methoxybenzyl alcohols ; rotational barrier ; substituent effect ; steric effect ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The conformations and the dynamic behaviors of α-monoalkyl- and α,α-dialkyl-o-methoxybenzyl alcohols are discussed on the basis of their 1H, 13C and 17O NMR spectra and MM3 calculations. The conformations of α-monoalkyl derivatives are shown to be different from those of α,α-dialkyl derivatives and unfavorable to form intramolecular OH · · · O hydrogen bonds. The trends of substituent effects on the restricted rotation about the Cipso - Cα bond could be reproduced fairly well by MM3 calculations. © 1997 John Wiley & Sons, Ltd.
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  • 198
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    Journal of Physical Organic Chemistry 10 (1997), S. 901-907 
    ISSN: 0894-3230
    Keywords: human serum albumin ; vapor sorption ; organic compounds ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Sorption isotherms were measured for a series of organic compounds from the vapor phase on dried solid human serum albumin (HSA). Parameters of the Brunauer-Emmet-Teller (BET) isotherm were evaluated from experimental data. A nonlinear trend was observed between the volume of a filled ‘monolayer’ and the molar volume of organic compounds. The effective ‘monolayer’ volume quickly decreased with increase in sorbate molar volume. Larger molecules have less space available for sorption on solid HSA. This shows that the size of molecules is important factor determining the number of available places for sorption on HSA. The sorbate-protein interactions are sensitive also to the structural differences between n-and iso-isomeric sorbates. The Gibbs energy RTlnKR for the sorbate transfer from the gas phase standard state to the state to the state of an infinite by diluted sorbed compound (at zero sorbate activity) with uptake 1 mol kg-1 was calculated from the BET parameters. This Gibbs energy of the gas phase-protein phase transfer corresponds to the distribution coefficient KR similar to the Henry coefficient. A correlation was found between RTlnKR values and the molar volume of sorbates. As distinct from the behavior typical for organic solvents, larger molecules are more distributed to the gas phase in comparison with smaller compounds. The positive increment of a methylene group to the gas-protein transfer Gibbs energies was also estimated from data for aliphatic alcohols. This increment is higher than the analogous value evaluated from the Gibbs energies of hydration of the same alcohols. The sorption phenomenon was interpreted in terms of dissolution of organic compounds in the protein phase. It demonstrates a superficially repulsive effect for the organic molecules sorbed in solid HSA. © 1997 John Wiley & Sons, Ltd.
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  • 199
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    Journal of Physical Organic Chemistry 10 (1997), S. 680-686 
    ISSN: 0894-3230
    Keywords: 8-aminoquinoline ; x-ray structure ; vibrational spectra ; three-center hydrogen bond ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: -The x-ray structure of 8-aminoquinoline indicates that one of the NH bonds of the NH2 group forms a three-center hydrogen bond, the major component being the intramolecular hydrogen bond and the minor component the intermolecular hydrogen bond. The IR and Raman spectra of 8-aminoquinoline and of its N-deuterated counterpart reflect the non-equivalence of the two NH(D) bonds and the weakness of the hydrogen bridge. © 1997 John Wiley & Sons, Ltd.
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  • 200
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    Journal of Physical Organic Chemistry 10 (1997), S. 675-679 
    ISSN: 0894-3230
    Keywords: chemical contrast ; scanning near-field optical microscopy ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Repeatable and stable scanning near-field optical microscopy (SNOM) images are obtained under shear-force control if uncoated, i.e. cold and sharp, tapered fiber tips are used. True chemical contrast is seen for the first time on organic crystals due to the different near-field reflectivities of different chemical species on partly oxidized anthracene. The topography spans a Z-range of 500 nm. The surface roughness is tolerable and the sites of reaction can be related to crystal structure data. A submicroscopic local resolution of 18 nm has been obtained for chemical contrast, discriminating different chemical species even with poorly reflecting organics on rough crystal surfaces. Thus, reflection-back-to-the-fiber SNOM will find wide applications for both transparent and opaque samples. All drawbacks with blunt and hot metal-coated tips at a 〈10 nm distance from the surface in previous SNOM setups are overcome. © 1997 John Wiley & Sons, Ltd.
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