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  • 1
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Phosphoenolpyruvate carboxylase is a key enzyme in the fixation of atmospheric CO2 in C4 and crassulacean acid metabolism (CAM) plants. The enzyme catalyzes the irreversible carboxylation of phosphoenolpyruvate to form oxaloacetate and inorganic phosphate, the first committed step in the fixation of external CO2 in these plants. The enzyme has been isolated from maize leaves and crystallized using the hanging-drop vapour-diffusion method with PEG 8000 as a precipitant at pH 7.5. The crystals belong to space group C2221, with unit-cell dimensions a = 160.2, b = 175.6, c = 255.5 Å, and diffract to 3.2 Å resolution.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Azurin I from Alcaligenes xylosoxidans NCIMB 11015 (AzN-I) was crystallized by using PEG 4000 as a precipitant. The crystals belong to the monoclinic crystal system and have a space group C2 with the unit-cell parameters of a = 130.67, b = 54.26, c = 74.55 Å, and β = 95.99°. The structure of AzN-I has been solved by the molecular replacement method. Azurin II from the same bacterium (AzN-II) was chosen as the initial structural model. The final crystallographic R value is 17.3% and free R value is 23.6% for 10 958 reflections at a resolution of 2.45 Å. The root-mean-square deviations for main-chain atoms range between 0.19 and 0.26 Å among the four independent molecules in the asymmetric unit. The Cu atom is coordinated to Nδ of His46 and His117 at 2.0 (1) and 1.9 (1) Å, and to Sγ of Cys112 at 2.2 (1) Å, while the carbonyl O atom of Gly45 and Sδ of Met121 coordinate axially to Cu atom at 2.5 (1) and 3.1 (1) Å, respectively. The Cu—N and Cu—S distances of AzN-I are quite similar to those of AzN-II, however, the Cu—O (Gly45) bond length in AzN-I is 0.25 Å shorter than its counterpart in AzN-II. The results have been used to discuss the differences in the spectra of these two proteins.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Crystals of archaeal O6-methylguanine–DNA methyltransferase (MGMT) from hyperthermophilic archaeon Pyrococcus kodakaraensis strain KOD1 have been grown at room temperature using polyethylene glycol as a precipitant. The diffraction pattern of the crystal extends to 2.0 Å resolution at room temperature upon exposure to Cu K\alpha radiation. The crystal belongs to the space group P212121 with unit-cell dimensions of a = 52.8, b = 86.6 and c = 39.9 Å. The presence of one molecule per asymmetric unit gives a crystal volume per protein mass (Vm) of 2.3 Å3 Da−1 and a solvent content of 48% by volume. A full set of X-ray diffraction data was collected to 2.0 Å Bragg spacings from the native crystal.
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  • 4
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: The obligate methylotroph Methylomonas J possesses two distinct azurins. The iso-2 azurin, which functions as an electron acceptor for methylamine dehydrogenase, has been crystallized using two kinds of precipitants: PEG 4000 and ammonium sulfate. The crystals precipitated with PEG belong to the monoclinic system, space group P21, with unit-cell parameters a = 32.96, b = 33.67, c = 47.34 Å and β = 101.35°. The crystals precipitated with ammonium sulfate belong to the orthorhombic system, space group C2221, with unit-cell parameters a = 31.52, b = 62.49 and c = 135.41 Å. The crystals diffract to 1.6 and 1.9 Å resolution, respectively, and were suitable for X-ray crystallographic studies. A Patterson search is being conducted using the recently reported structure of Alcaligenes xylosoxidans NCIMB 11015 as a starting model.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 55 (1999), S. 683-684 
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: A plastocyanin from the cyanobacterium Synechococcus sp. PCC7942 has been crystallized in two different forms by hanging-drop vapour diffusion with ammonium sulfate as precipitant. Form I is hexagonal, space group P61 or P65, with unit-cell dimensions a = b = 34.62 and c = 107.22 Å. Form II is tetragonal, space group P41 or P43, with unit-cell dimensions a = b = 43.05 and c = 56.94 Å. Form I crystals diffract to 2.5 Å using graphite-monochromated Cu Kα radiation from a Rigaku RU-300 rotating-anode generator operated at 40 kV and 100 mA. Form II crystals diffract to 1.9 Å using synchrotron radiation at beamline BL6A of the Photon Factory (KEK). Molecular-replacement calculations using the structure of plastocyanin from Ulva pertusa have been performed.
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  • 6
    ISSN: 1432-1327
    Keywords: Azurin ; Methylamine dehydrogenase ; Blue copper protein ; Obligate methylotroph ; X-ray crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Methylomonas sp. strain J gives rise to two azurins (Az-iso1 and Az-iso2) with methylamine dehydrogenase (MADH-Mj). The intense blue bands characteristic of Az-iso1 and Az-iso2 are observed at 621 and 616 nm in the visible absorption spectra respectively, being revealed at 620−630 nm in those of usual azurins. The EPR signal of Az-iso1, similar to usual azurins, shows axial symmetry, while the axial EPR signal of Az-iso2 involves a slightly rhombic character. The half-wave potentials (E 1/2) of the two azurins and the intermolecular electron-transfer rate constants (k ET) from MADH-Mj to each azurin were determined by cyclic voltammetry. The E 1/2 values of Az-iso1 and Az-iso2 are +321 and +278 mV vs NHE at pH 7.0, respectively. The k ET value of Az-iso2 is larger than that of Az-iso1 by a factor of 5. However, the electron-transfer rate of Az-iso2 is interestingly slower than those of the azurins from a denitrifying bacterium, Alcaligenes xylosoxidans NCIB 11015, and the amicyanin from a different methylotroph, Methylobacterium extorquens AM1. The structure of Az-iso2 has been determined and refined against 1.6 Å X-ray diffraction data. The whole structure of Az-iso2 is quite similar to those of azurins reported already. The Cu(II) site of Az-iso2 is a distorted trigonal bipyramidal geometry like those of other azurins, but some of the Cu-ligand distances and ligand-Cu-ligand bond angle parameters are slightly different. These findings suggest that Az-iso2 is a novel azurin and perhaps functions as an electron acceptor for MADH.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Nonlinear dynamics 11 (1996), S. 107-120 
    ISSN: 1573-269X
    Keywords: Vibration of continuous rotor ; nonlinear vibration ; subharmonic resonance ; combination resonance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mathematics
    Notes: Abstract Nonlinear forced oscillations of a vertical continuous rotor with distributed mass are discussed. The restoring force of the rotor has geometric stiffening nonlinearity due to the extension of the rotor center line. The possibility of the occurrence of nonlinear forced oscillations at various subcritical speeds and the shapes of resonance curves at the major critical speeds and at some subcritical speeds are investigated theoretically. Consequently, the following is clarified: (a) the shape of resonance curves at the major critical speed becomes a hard spring type, and (b) among various kinds of nonlinear forced oscillations, only some special kinds of combination resonances have possibility of occurrence.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Applied Polymer Science 60 (1996), S. 911-917 
    ISSN: 0021-8995
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Two types of microporous filter materials were developed for removing virus from water by using poly(N-benzyl-4-vinylpyridinium chloride) that captures virus in water. Conventional ultrafiltration using one to three sheets of 145-μm-thick cellulose nitrate membrane with a pore size of 0.45 μm and coated with 1.7 mg/g of poly(N-benzyl-4-vinylpyridinium chloride-co-styrene) showed 99.4-99.998% removal (2.2-4.7 log10-unit reduction in concentration) of bacteriophage T4, whereas the control experiments using noncoated membrane showed 91-96% removal (1.0-1.4 log10-unit reduction in concentration) of the virus. A composite 360-μm-thick microporous membrane with a pore size of 20 ¨m was prepared that consisted of connected minute beads of 1.7 ¨m in diameter made of crosslinked poly(N-benzyl-4-vinylpyridinium chloride) and reinforced by a nonwoven cloth. Simple filtration using one sheet of the composite membrane at 34.2cm/h showed 99.96-99.9995% removal (3.4-5.3 log10-unit reduction in concentration). The virus was not detected in the filtrate when two sheets of the composite membrane were used. © 1996 John Wiley & Sons, Inc.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
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