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  • 1995-1999  (370)
  • 1985-1989
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  • 1820-1829
  • 1995  (370)
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  • Atomic, Molecular and Optical Physics  (370)
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  • 1995-1999  (370)
  • 1985-1989
  • 1890-1899
  • 1820-1829
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  • 101
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 53 (1995), S. 361-374 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: All possible quadratic factors from the characteristic polynomial are generated. Selective extraction of the factors are smoothly achieved. Factors of the mirror plane and two-, three-, and n-fold rotationally symmetric graphs are obtained without using any rule for the fragmentation pattern. The relationship among the irreducible representations of the two-, three-, and n-fold operators are established through our computer program. © 1995 John Wiley & Sons, Inc.
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  • 102
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The present article develops a methodology and a unifying theorem to treat, on an equal footing, mathematical phenomena that were hitherto studied separately in each of the research fields of dynamical systems and quantum chemistry involving the spectral symmetry of alternant hydrocarbons. This article also serves as a foundation of a theoretical framework for the analysis of certain dynamical systems of chemical kinetic equations, which shall be made in the context of operator algebra in Parts II and III of this series of papers. © 1995 John Wiley & Sons, Inc.
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  • 103
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The methodology and theoretical framework of Part I of this series of articles have been further developed to the setting of the Banach algebra B(B), of all bounded operators acting on a Banach space B. Using the above setting B(B), certain dynamical systems of chemical kinetic equations are illustrated in conjunction with Part I and with the analysis of more general systems, some of which will be made in Part III of this series of articles. The main theorem and its auxiliary theorem in the present article elucidate in a unifying manner the structure and the underlying pattern of the spectral symmetry of linear operators (acting on Banach spaces and Hilbert spaces) that are investigated in each of the research fields of dynamical systems and quantum chemistry involving the spectral symmetry of alternant hydrocarbons. © 1995 John Wiley & Sons, Inc.
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  • 104
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    International Journal of Quantum Chemistry 53 (1995), S. 407-412 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Localized molecular orbitals, two- and three-center bond indices of 1,5-dicarba-closo-pentaborane (5) and 1,5-dicarba-closo-pentaborane (3) and their hydrocarbon analogs bicyclo [1,1,1]-pentane and [1,1,1] propellane, respectively, have been calculated using a suitable basis set. No previously reported three-center CBC bond has been found. However, a new three-center BCB bond has been observed in 1,5-dicarba-closo-pentaborane (5). © 1995 John Wiley & Sons, Inc.
    Additional Material: 3 Ill.
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  • 105
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    International Journal of Quantum Chemistry 53 (1995), S. 413-418 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The helium dimer 4He2 has recently been detected, confirming earlier ab initio predictions of stability for a single bound state with binding energy of 1.310 mK. The predicted potential minimum is at 2.96 Å, with a radial distribution function peaking at 6.96 Å. We model this system using a Dirac bubble potential, which also admits just one bound j = 0 state. With the bubble located at 6.96 Å, an overlap of 0.9994 with the ab initio wave function is obtained. An average internuclear distance of 52.6 Å is calculated, in good agreement with the ab initio result. The root mean square deviation from the mean, 48.0 Å, indicates an enormous spread of the radial wave function. Also consistent with our model is the absence of bound states for the isotopic variants 3He4He and 3He2. Cross sections for helium-helium scattering are also computed, using both a partial-wave expansion and the Born approximation. General trends in the energy dependence of the total cross section are accounted for, in qualitative agreement with experimental results. © 1995 John Wiley & Sons, Inc.
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  • 106
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    International Journal of Quantum Chemistry 53 (1995), S. 419-429 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We propose a new type of Gaussian basis sets for use in calculations of electron scattering by molecules. Instead of locating the basis-set functions on the atomic centers of the target molecule, we place primitive s-type Gaussians at the positions of a cubic lattice with a regular grid. The grid and the Gaussian exponent are fixed so as to give the best representation of the plane-wave function. Plane-wave functions and Green functions obtained by means of the cubic-grid basis set are tested graphically against exact functions and functions expressed by means of a conventional Gaussian basis set. © 1995 John Wiley & Sons, Inc.
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  • 107
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    International Journal of Quantum Chemistry 53 (1995), S. 473-483 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Some phase-fitted P-stable methods are developed here. These methods have an algebraic order two and four, an interval of periodicity (0, ∞), and a phase-lag of order inifinity. Applications of the new methods to an orbit equation and the resonance problem of the Schrödinger equation (this problem involves finding all values of the energy for which the phase shift δ (E) is equal to π/2) show that the new methods are much more efficient than are other well-known methods. Also, based on these two methods, a new variable-step technique is obtained. Application of the new variable-step scheme to the phase-shift problem of the radial Schrödinger equation and to close-coupled equations of the Schrödinger type shows that the new variable-step method is much more efficient than is the well-known method of Raptis and Cash. © 1995 John Wiley & Sons, Inc.
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  • 108
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    International Journal of Quantum Chemistry 53 (1995), S. 457-466 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The perturbation expansion coefficients for the ground-state energy of the half-filled one-dimensional Hubbard model with N = 4ν + 2, (ν = 1, 2,…) sites and satisfying cyclic boundary conditions were calculated in the Hückel limit (U/β → 0), where β designates the one-electron hopping or resonance integral, and U, the two-electron on-site Coulomb integral. This was achieved by solving - order by order - the Lieb-Wu equations, a system of transcendental equations that determines the set of quasi-momenta {ki} and spin variables {τα} for this model. The exact values for these quantities were found for the N = 6 member ring up to the 20th order in terms of the coupling constant B = U/2β, as well as numerically for 10 ≤ N ≤ 50, and the N = 6 Lieb-Wu system was reduced to a system of sextic algebraic equations. These results are compared with those of the infinite system derived analytically by Misurkin and Ovchinnikov [Teor. Mat. Fiz. 11, 127 (1972)]. It is further shown how the results of this article can be used for the interpolation by the root of a polynomial. It is demonstrated that a polynomial of relatively small degree provides a very good approximation for the energy in the intermediate coupling region. © 1995 John Wiley & Sons, Inc.
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  • 109
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    International Journal of Quantum Chemistry 53 (1995), S. 485-493 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The energy of weakly overlapping group functions can be written as a series according to the powers of the (σ - I) matrix, where σ is the molecular overlap matrix and I is the unit matrix [1,2]. This power series of the energy is studied by investigating the importance of different order terms to obtain accurate energies and to predict equilibrium bond lengths. It is found that the series is truncated advantageously at an even-order term. Approximate formulas for the first- and second-order terms are proposed in order to reduce computational work. Numerical examples are presented to illustrate the effect of these terms to the energy. The relation of the projection energy to the approximate first- and second-order terms is also discussed. It is found that, by choosing appropriate projection factors, the projection energy corrects the zeroth-order energy more efficiently than does the first-order term. The inclusion of the approximate second-order term represents a slight improvement with respect to the use of the projection energy at the expense of some extra computation. © 1995 John Wiley & Sons, Inc.
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  • 110
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    International Journal of Quantum Chemistry 53 (1995), S. 495-499 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A purely group-theoretical approach (for which the symmetric group plays a central role), based upon the use of properties of fractional-parentage coefficients and isoscalar factors, is developed for the derivation of the Coulomb energy averaged over the states, with a definite spin, arising from an atomic configuration nlN. © 1995 John Wiley & Sons, Inc.
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  • 111
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A short review of the different approaches to the justification of the Neglect of Diatomic Differential Overlap in the basis of symmetrically orthogonalized basis functions is given. Brown and Roby employed the binomial expansion for the approximation of the inverse square root of the overlap matrix. For some overlap matrices, this expansion does not converge. The always-convergent power series given by Chandler and Grader provides a worse second-order approximation in comparison with the second-order binomial expansion. © 1995 John Wiley & Sons, Inc.
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  • 112
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    International Journal of Quantum Chemistry 54 (1995) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 113
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    International Journal of Quantum Chemistry 54 (1995), S. 13-18 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A recipe for the accurate calculation of eigenstates of quartic double-well oscillators is presented. The behavior of eigenenergies as a function of the coupling strength is also studied. The quality of the semiclassical (WKB) expression for eigenvalues is critically assessed in this context. The analysis also includes a discussion on the possibility of degeneracy in such one-dimensional systems. © 1995 John Wiley & Sons, Inc.
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  • 114
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    International Journal of Quantum Chemistry 54 (1995), S. 3-11 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Variational calculations for the lowest-energy states of the hydrogen atom confined in (A) semi-infinite spaces with paraboloidal boundaries, (B) symmetrical boxes with paraboloidal surfaces, and (C) prolate spheroidal boxes were performed with geometry-adapted trial wave functions. Comparisons of variational energies with the exact energies available for the respective geometries provide indications on the reliability of the trial wave functions. This is a necessary and preliminary step to investigate atoms with several electrons in the corresponding confining geometries. © 1995 John Wiley & Sons, Inc.
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  • 115
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    International Journal of Quantum Chemistry 54 (1995), S. 43-49 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The structures of P2 + P2+ were studied with ab initio calculations at the ROHF and UHF levels with the 6-31G* basis set. The geometries and dissociation energies for the four selected structures-collinear, T-shaped, regular trapezoid, and elongated tetrahedral-were studied in comparison with N2 + N2+. The trade-off of the intramolecular π bond for the intermolecular σ bond for the P4+ system results in its larger dissociation energies and more substantial changes in bond distances than those in the N4+ system. © 1995 John Wiley & Sons, Inc.
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  • 116
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    International Journal of Quantum Chemistry 54 (1995), S. 51-59 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: To probe the decarboxylation process of methyl-ethyl-α pyridylacetic acid (MEPA), molecular orbital calculations on the optimized geometry, transition-state geometry, and intrinsic reaction coordinate were performed by the MNDO-PM3 method. The salient features of the optimized structure of MEPA are that the carboxyl anion is nearly on the plane of the pyridine ring (the dihedral angle of C8—C7—C2—N1 is 14.7°) and that the interatomic distance… is used for a noncovalent bond, such as N+ 1 … O-9. of O-9 … H1′ is 1.6 Å (exchange of electrons exists between their atoms). The transition-state geometry of the decarboxylation process has the following features: (1) the activation enthalpy is 6.0 kcal/mol, (2) the dihedral angle of C8—C7—C2—N1 is -50.2°, and (3) the interatomic distance of O-9—H1′ and C7—C8 increase by 111 and 124%, respectively, as compared with the optimized geometry. From the extreme beginning of the intrinsic decarboxylation process, the exchange of electrons between O-9 … H1′ begins to decrease. This decrease, which is considered to be induced by the rotation of C2—C7, seems to initiate the dissociation of C7—C8. © 1995 John Wiley & Sons, Inc.
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  • 117
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    International Journal of Quantum Chemistry 54 (1995), S. 61-72 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A general method for solving the problems of spatially confined quantum mechanical systems is proposed. The method works within the framework of the model space approximation. In the case of atoms and molecules trapped into any-shape microscopic cavity (like molecular sieves or fullerenes), the method reduces to a simple modification of the commonly used basis-set quantum chemical calculations. The modification consists of a particular rotation and projection in the model space, leading to solutions better adapted to the boundary conditions of the spatial confinement than the functions that describe the free systems. To illustrate how this method works, it has been applied to the hydrogen atom confined in a spherical well, near a hard wall and confined in a cubic box. The results are also compared to the exact solutions. © 1995 John Wiley & Sons, Inc.
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  • 118
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    International Journal of Quantum Chemistry 54 (1995), S. 73-81 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the embedded cluster method, a cluster is embedded in a correction potential. This potential adds the long-range electrostatic forces of the crystal and subtracts the electrostatic potential of the boundary errors of the cluster. The correction potential is calculated from the wave function of the cluster and the crystal. So far, the method has only been used on a cluster having the same geometry and basis set as that of the crystal. Here, we calculated the adsorption energies of NH3 and NH4+ on an embedded zeolite cluster with different basis sets and modified geometries. We showed that a mixed basis set, a basis set having a large basis set on the atoms around the adsorption site and a minimal basis set on the atoms of the boundary of the cluster, yields adsorption energies close to that of the large basis set. The optimized geometries of the zeolite acidic site were almost equal for the nonembedded cluster, the embedded cluster, and the crystal. By combining the mixed basis set with a partial geometry optimization, an improved description of the adsorption process is obtained. © 1995 John Wiley & Sons, Inc.
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  • 119
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    International Journal of Quantum Chemistry 54 (1995), S. 93-98 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Molecular structures of neutral and anionic beryllium hydrides have been investigated using ab initio calculations at the MP2 (geometries) and MP4 (energies)/6 - 31++G** levels. ZPE and (if possible) BSSE correction have been included. While BeH2- is not stable, the radical anion of the beryllium hydride dimer is significantly stabilized with respect to the neutral Be2H4 system. Moreover, this anion can appear in two isomeric forms with comparable stability. © 1995 John Wiley & Sons, Inc.
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  • 120
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    International Journal of Quantum Chemistry 54 (1995), S. 99-105 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nonlinear population analysis of pair densities introduced by one of us (R. B.) is reformulated using the geminal expansion of pair densities. The pair density in the geminal basis is idempotent and allows one to describe the bonding patterns as singlet-and tripletlike contributions while still conserving the statistical nature of the original formalism. The new approach is applied to the analysis of pair densities derived from semiempirical MNDO calculations. The resulting values of pair populations of several simple molecules are discussed. © 1995 John Wiley & Sons, Inc.
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  • 121
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    International Journal of Quantum Chemistry 54 (1995) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 122
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    International Journal of Quantum Chemistry 54 (1995), S. 137-145 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Using the connection between the evolution operator and the stationary value of the Lippmann-Schwinger functional, approximations to this operator are obtained using diagonal Padé approximants. A harmonic oscillator with a non-hermitean perturbation proportional to powers of the bosonic creation operator is considered and its evolution operator is evaluated. The poles of the spectral representation obtained by this method are compared to both: the ones of the usual perturbative expansion and those of the exact solution. Extensions to Hermitian Hamiltonians are discussed, involving the necessity of inverting more complex operators in the calculation of the Fourier transform. However, the approximation obtained by this procedure becomes exactly unitary. © 1995 John Wiley & Sons, Inc.
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  • 123
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    International Journal of Quantum Chemistry 54 (1995), S. 161-166 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Structures and total energies of the cis-NO dimer, the trans-NO dimer, and the NO monomer were calculated by ab initio methods (UHF, UMP2, and MP3) and density functional theory methods (LSDA and BLYP) with different basis sets [from 3-21G* to 6-311++(3df,3pd)]. The system is especially hard to model because two NO molecules are weakly associated in a dimer that has a very long N—N bond. The results obtained by different methods are compared and the necessity of correlational methods for studying these systems is discussed. © 1995 John Wiley & Sons, Inc.
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  • 124
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    International Journal of Quantum Chemistry 55 (1995), S. 339-345 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Calculations are carried out using first-principles self-consistent local-density and nonlocal density theory of the electronic structure, the total energy, and the charge density of a variety of semiconducting and insulating compounds under hydrostatic and uniaxial pressure. For several cases, the transition pressure from one structure to another is determined as well as the pressure coefficients of the main band gaps. It is shown that several properties are calculated with adequate accuracy to be compared with experiment, so that values which have not yet been measured are trustworthy predictions. © 1995 John Wiley & Sons, Inc.
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  • 125
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    International Journal of Quantum Chemistry 55 (1995), S. 361-366 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The structure of 4,5-benzo-3-isothiazolone and 5-phenyl-2-(E)-styryl-3-isothiazolone have been calculated both at the semiempirical AM1 level and by using the ab initio 4-31G basis set. Neither method gives a satisfactory account of the bond lengths and angle at the sulfur atom in comparison with crystallographic data, but the inclusion of polarization functions on the sulfur atom alone gives a marked improvement in the theoretical results. The conformations, structure, and electronic properties of a series of other antifungal 3-isothiazolones have been calculated by the same method. Although structural effects do not appear to play an important role in the mechanism of the inhibition of fungi by the 3-isothiazolones described here, the electronic properties calculated in terms of the atomic charge at sulfur and the LUMO energy appear to relate to their known reactivity with nucleophiles and their observed biological activity. © 1995 John Wiley & Sons, Inc.
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  • 126
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    International Journal of Quantum Chemistry 53 (1995) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 127
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    International Journal of Quantum Chemistry 53 (1995), S. 1-2 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 128
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    International Journal of Quantum Chemistry 53 (1995), S. 3-7 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is well known that hydrogen like atoms may be represented as Morse oscillators. Our aim in this article was to show how this result and the hypervirial theorem lead to a computational method with which the matrix elements for the Coulomb potential can be easily calculated. Also, a closed analytical expression for 〈n2l2|rk|n1l1〉 is obtained. © 1995 John Wiley & Sons, Inc.
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  • 129
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 130
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    International Journal of Quantum Chemistry 54 (1995), S. 369-379 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Four common five-membered heterocycles - pyrrole, phosphole, thiophene, and furan - and their oligomers with the chain length of 2, 4, 6, and 10 units have been studied quantum chemically using the semiempirical PM3 parameterization. The oligomers of pyrrole and phosphole with the homolytically dissociated N—H bond and P—H bond, respectively, and oligomers of thiophene and furan with one electron removed per monomer unit (4n + 2 π-electron bipolaron systems) have also been studied. The electronic properties of the respective polymers were extrapolated from the oligomer data. Bulk polymer effects on the electronic structure were modeled using the self-consistent reaction field theory in the multicavity approximation (MCa SCRF). © 1995 John Wiley & Sons, Inc.
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  • 131
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    International Journal of Quantum Chemistry 54 (1995), S. 381-392 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Density functional self-consistent spin-polarized calculations with the discrete variational method were performed to obtain the electronic structure of the paramagnetic complexes [Co(CN)5]3-, [Rh(CN)5]3-, and [Ir(CN)5]3- of square-pyramidal geometry. All electrons were kept in the variational space. Electric-field gradients and magnetic hyperfine parameters at the metal site were computed with the molecular charge and spin densities obtained and compared with experimental values derived by electron paramagnetic resonance. It was found that the Fermi interaction is critically dependent on the angle between the axial and equatorial CN ligands. © 1995 John Wiley & Sons, Inc.
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  • 132
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    International Journal of Quantum Chemistry 55 (1995), S. 1-2 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
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  • 133
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    International Journal of Quantum Chemistry 55 (1995), S. 485-492 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A procedure of constructing a complete fragment orbital basis set is described in detail. It provides a complete fragment orbital basis for PMO analysis of the atomic interaction energy. Rt values, a ratio of the bonded atomic interaction energy to the nonbonded interaction energy arising from the peripheral atoms of the aromatic rings, indicate a decrease in the reactivity of the aromatic ring toward electrophilic attack in the sequence: pyrrole 〉 imidazole 〉 furan 〉 pyrazine 〉 pyrimidine 〉 aniline 〉 benzene 〉 pyridine 〉 p-acylaniline 〉 p-cyanoaniline 〉 p-nitroaniline 〉 m-cyanoaniline. © 1995 John Wiley & Sons, Inc.
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  • 134
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    International Journal of Quantum Chemistry 53 (1995), S. 77-81 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We report here the first quantitative theory of the change of anisotropic Fermi surfaces (FS) due to the dynamical e-e interaction. The new FS is constructed as a self-consistent solution of the Dyson equation. This incorporates effects of “anomalous” diagrams, absent in the usual perturbation theory, but which are responsible for changing the FS. Calculations are presented for 2D electrons. Correlations reduce the anisotropy. © 1995 John Wiley & Sons, Inc.
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  • 135
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    International Journal of Quantum Chemistry 53 (1995), S. 95-95 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 136
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    International Journal of Quantum Chemistry 53 (1995), S. 83-91 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The possibilities and limits of the molecular orbital theory to deal with the problem of determining electronic structure of solids have been explored. A cluster model based on the charge neutrality in the solid has been used in test calculations on some III-V semiconductors and have given quite satisfactory results. Recommendations are given to widen the field of applications of this procedure. © 1995 John Wiley & Sons, Inc.
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  • 137
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    International Journal of Quantum Chemistry 56 (1995) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 138
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    International Journal of Quantum Chemistry 55 (1995) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 139
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    International Journal of Quantum Chemistry 53 (1995), S. 97-103 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The importance of deductive theories in the modern natural sciences built essentially on experiments is briefly discussed. The logical structure of the deductive theories, their axioms, undefined quantities, and realizations is treated in some detail. In all the natural sciences, there is a striving to explain all the various phenomena in nature in terms of a few basic principles, and this “reductionism” leads to a certain amount of unification of these sciences. The chain that goes from biology, over molecular biology, biochemistry, chemistry, and physics to the description of nature in terms of the elementary particles obeying the laws of modern quantum chemistry is reviewed. Since all the measurements of microcosmos involve an observer, who according to the Copenhagen school experiences the outside universe as a projection on his or her mind through his or her senses, some theoreticians may be inclined to reduce the natural sciences to the human mind as the fundamental (undefined) quantity. However, since the observer is a biological structure, one is also back where one started, and it is evident that one can start the reduction or unification of the natural sciences in any point on this circle (or spiral). Hence, there are many descriptions of the natural sciences and their connections that are possible - as illustrated at this symposium. © 1995 John Wiley & Sons, Inc.
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  • 140
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  • 141
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  • 142
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    International Journal of Quantum Chemistry 53 (1995), S. 131-147 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Coulomb-Hole-Hartree-Fock method introduced by E. Clementi in the early 1960s and reparametrized more recently by S. Chakraworty and E. Clementi to compute the correlated electronic energy in atomic systems, is here extended to compute molecules. The new parametrization is obtained empirically by fitting first and second atomic ionization potentials from He to Ca and a few diatomic molecules. The present formulation makes use of either one or more determinants in order to ensure proper dissociation products, following the early proposal of G.C. Lie and E. Clementi in the context of density functional computations for molecular systems. The new formulation is tested against the dissociation energies of a large number of molecules and it is found satisfactory. © 1995 John Wiley & Sons, Inc.
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  • 143
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    International Journal of Quantum Chemistry 54 (1995), S. 1-2 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 144
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    International Journal of Quantum Chemistry 54 (1995), S. 19-26 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The concept of conjugate irreducible subspaces in the algebras of permutation groups is expressed in such a way that it emphasizes the existence of conjugate pathways along a chain of subgroups of permutations. The new expression is shown to be equivalent to parity conjugation and incorporates the notion of conjugate pathways in a natural and consistent manner. The example of the Aufbau chain of symmetric subgroups is used to show how the conjugacy of pathways may be useful in the symmetry adaptation of the spatial and spin parts of Fermion state functions. It is also employed to show that one may arrive at a quantitative statement that clearly expresses the conjugacy constraints placed upon a Fermion state function in order for it to satisfy the antisymmetry principle. A simple example of these conjugacy conditions is presented. © 1995 John Wiley & Sons, Inc.
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  • 145
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    International Journal of Quantum Chemistry 54 (1995), S. 27-41 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Master equations for propagators in quantum open systems and their spectral resolutions are derived. The Zwanzig partitioning scheme along the superoperator algebra are used to derive equations of motion for partitioned operators in a Liouville space. The reservoir influence on the dynamical evolution of operators is shown to lead explicitly to dissipative effects arising from memory terms in the evolution equations of such operators. It is also shown that spectral representations may be written in a self-consistent analytic way by means of the self-energy fields for transition energies of the system by taking into account the lack of the complete knowledge about the reservoir. A kinematic fluid interpretation of the resultant equations is given and an explicit form of the “collision” superoperator is obtained. Finally, a simple example to illustrate the determination of self-energy fields for the system-reservoir interaction corrections is given. © 1995 John Wiley & Sons, Inc.
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  • 146
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  • 147
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    International Journal of Quantum Chemistry 54 (1995), S. 83-87 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Spherical Gaussians can be expressed as linear combinations of the appropriate Cartesian Gaussians. General expressions for the transformation coefficients are given. Values for the transformation coefficients are tabulated up to h-type functions. © 1995 John Wiley & Sons, Inc.
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  • 148
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    International Journal of Quantum Chemistry 54 (1995), S. 89-92 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new boundary treatment, a Hartree-Fock (HF) surface potential model, is proposed to deal with the surface effect in the solid-state cluster calculations using the LCAO-MO-SCF ab initio method. The surface potential arises from one or more atoms, which have no basis function and are added to the calculated cluster system. These atoms are placed in such sites so that the HF potential field of the calculated system should possess a point-group symmetry. The surface potential could be found by the corresponding HF potential using a symmetry operator. The fact that a rather symmetric electronic structure of the asymmetric cluster YBa2CuZn2O7 is obtained using the HF surface potential shows that the surface effect in the cluster calculations could be neutralized to a great extent. © 1995 John Wiley & Sons, Inc.
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  • 149
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    Topics: Chemistry and Pharmacology
    Notes: Indol-3-ylacetic acid (IAA) is a plant growth hormone (auxin) which controls a number of physiological functions in higher plants. Molecular recognition approaches based on structure/activity correlations include the conformational properties of the substrate. Thus a detailed ab initio SCF (RHF) conformational analysis of IAA has been performed with the basis sets STO-3G, 3-21G, 4-31G, 6-31G* and 6-311G**. A significant basis set dependence occurs for the two smallest basis sets; the results obtained with the largest basis sets agree well with experimental gas phase, and solid state data. Comparison of the ab initio results with those obtained from MM calculations with MM2(87), MM3, CVFF, and cff91 shows considerable differences: MM calculations are unable to locate two of the four different ab initio conformers. © 1995 John Wiley & Sons, Inc.
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  • 150
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    International Journal of Quantum Chemistry 56 (1995), S. 103-112 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A computationally efficient procedure for modeling the alkaline hydrolysis of esters is proposed based on calculations performed on methyl acetate and methyl benzoate systems. Extensive geometry and energy comparisons were performed on the simple ester methyl acetate. The effectiveness of performing high level single point ab initio energy calculations on the geometries obtained from semiempirical and ab initio methods was determined. The AM1 and PM3 semiempirical methods are evaluated for their ability to model the transition states and intermediates for ester hydrolysis. The Cramer/Truhlar SM3 solvation method was used to determine activation energies. The most computationally efficient way to model the transition states of large esters is to use the PM3 method. The PM3 transition structure can then be used as a template for the design of haptens capable of inducing catalytic antibodies. © 1995 John Wiley & Sons, Inc.
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  • 151
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    International Journal of Quantum Chemistry 56 (1995), S. 385-388 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: For the purpose of improving present approximations to the exchange and correlation potentials, newly derived properties of the exact exchange and correlation potentials are summarized. Present approximations are not expected to generally satisfy these properties. The summarized properties include relations at the Fermi level, low-density requirements, and a new density functional formula for computing ionization energies. © 1995 John Wiley & Sons, Inc.
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  • 152
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    Topics: Chemistry and Pharmacology
    Notes: Photoionization cross sections are evaluated at the local density level avoiding any potential shape approximation by employing the Stieltjes imaging (ST) technique in conjunction with large (STO) basis LCAO calculations. The ST technique proves accurate in comparison with full continuum calculation on the noble gases ionization. Several choices for the final-state potentials, including different exchange-correlation potentials, are tested on the noble gases, as well as in H2O and CO. Finally, several molecules are investigated employing the transition-state xα potential and the results compared with available experimental data and previous calculations. The accuracy of the proposed approach appears quit comparable to the ab initio static-exchange level, removing spurious resonances associated to the muffin-tin approximation, and should prove useful in the analysis and interpretation of cross-section data for large systems, where it is shown that basis-set requirements become less stringent. The accuracy obtainable for the cross-section profiles allows close comparison with experimental data, which, although showing good general agreement for the shape of the cross-section profile, indicates the need of a further refinement of the theoretical model. © 1995 John Wiley & Sons, Inc.
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  • 154
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    International Journal of Quantum Chemistry 56 (1995), S. 409-419 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Two different macrospopic pieces of copper have different external potentials and, because of the unique functional relationship between the electron density and the external potential as demanded by density functional theory, should possess different electron density distributions. Experimentally, however, an atom in the bulk exhibits the same electron density in both samples and they possess identical sets of intensive properties. Density functional theory does not account for the fundamental observation underlying the theory of atoms in molecules: that what are apparently identical distributions of charge can be observed for an atom or a grouping of atoms in systems with different external potentials and that these atoms contribute essentially identical amounts to the energies and all other properties of the systems in which they occur. It is shown that, unlike the external potential, the kinetic energy density and the potential energy density, defined by the virial of the Ehrenfest force acting on electron density, are short-range functions. As recorded in the first article on atoms in molecules, they exhibit a local dependence on the electron density that causes them to faithfully mimic the transferability of the atomic charge distributions from one system to another. The electron, the kinetic energy, and the virial densities are all determined directly by the one-electron density matrix, a function termed near-sighted by Professor Kohn. It is this near-sighted property of the one-matrix that underlies the working hypothesis of chemistry - that of a functional group exhibiting a characteristic set of properties. The observations obtained from the theory of atoms in molecules and the atomic theorems it determines demonstrate the existence of a local relationship between the electron density and all properties of a system. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 54 (1995), S. 243-247 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Based on the conformation dynamics of macromolecules, the rate of conformational transition is deduced from the nonadiabaticity operator method which can be used to explain the time scale of milliseconds for protein folding. It is proved that (1) the dependence of the transition rate on inertial moment I of the atomic group obeys the I-2.5 law; (2) its dependence on numbers n of torsional angles participating in the transition obeys the n1.5 law; and (3) the temperature dependence of the transitional rate shows an abnormal character in the high- temperature region. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 53 (1995), S. 265-273 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In order to avoid the violation of basic principles of macroscopic reversibility and detailed balance, we propose a cell kinetic model for atom-photon interactions instead of Enstein's classical photon kinetic mechanism. Our model can be interpreted as a generalization of either mass action law or Einstein's original scheme. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 29-30 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 56 (1995), S. 31-40 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this article we have determined the structure of the exchange potential v(0)x(r) at a jellium metal surface previously derived by restricted functional differentiation of the exchange energy functional. The potential, which depends on the Slater potential due to the Fermi hole, the density, and their gradients, is obtained analytically for the orbitals of the infinite barrier model. We have also determined the exchange potential Wx(r) of the work formalism, which is the work done to move an electron in the forcefield of the Fermi hole, for the same model effective potential, the field being derived analytically. A comparison of these potentials shows them to be close approximations. The functional derivative v(0)x(r) is further provided a physical interpretation by rewriting it in Slaterpotential form. The corresponding effective Fermi hole charge distribution, also determined analytically, has a dynamic structure as a function of electron position similar to that of the Fermi hole but smaller in magnitude. Finally, proofs are provided of the satisfaction by vX(0)(r) of the virial theorem sum rule, the second functional derivative condition, and the sum rule relating the exchange potential to its functional derivative. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 61-78 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The current capabilities of density functional theory reach their limits somewhere in the region of weak inter- and intramolecular interactions. Hydrogen bonds can be treated, but not perfectly. The few results that have been obtained for dispersion-dominated van der Waals interactions are erratic. The generalized gradient approximation fails for charge-transfer complexes; hybrid functionals that incorporate a component of the Hartree-Fock exchange are promising, but the results depend strongly on the variant used. We recently used the adiabatic connection and coordinate scaling to develop correlation functionals based on a spin-polarized pair correlation function of the Colle-Salvetti type. A résumé of the current status of the functionals is given, including inter alia available validation results for various molecules and reactions, the water dimer, and charge-transfer complexes. It is shown that nonlocal schemes involving the kinetic energy density and, hence, the Laplacian of the electron density lead to an overall improvement of the calculated binding energies and equilibrium geometries, especially in cases when the current GGA schemes meet difficulties. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 547-562 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An approach to the N-electron behavior is presented which emphasizes the dynamics of an individual electron. The generalized overlap amplitudes (GOAS), although formally defined by an integration over the coordinates of N - 1 electrons, are, instead, resolved as a column vector, eigenfunction to a local one-electron differential operator. These amplitudes have no restrictions of linear independence between them, but each satisfies the one-electron boundary conditions at the nuclei and at large distances. The one-electron (or charge) density is the sum of the squares of the elements of the column. The energy density, a constant times the one-electron density, maintains this one-to-one relationship throughout modifications in total number of electrons or external potential, although the constant of proportionality, the total energy of the system, may change in the process. Indistinguishability of electrons and antisymmetry is always observed by the dynamics of each electron. A numerical example, the ground state of helium, is presented. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 563-573 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A model for the mutual polarization of two approaching molecules is proposed, exploiting the principle of electronegativity equalization. The deformation of the electronic density of one molecule is the response to the perturbation of its chemical potential due to the electrostatic potential of the other molecule. The electronic densities, the density deformations, and the electrostatic potentials of both molecules are described with a previously developed asymptotic density model (ADM). The ADM model allows a partitioning of all relevant properties in terms of atomic quantities. The perturbation of the chemical potential is given in atomic resolution, and the change of the electronic density is represented in terms of atomic charges. A hardness tensor, which determines the changes of the atomic chemical potentials due to the changes of the atomic charges, is modeled consistently with the ADM and earlier approaches. The results of the model, the changes of atomic charges within the molecules due to their mutual interaction, are compared with the changes of atomic charges obtained from population analysis of ab initio calculations. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 615-625 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The effects of the solvent on the tautomeric equilibria of cytosine and uracil are studied using Onsager's reaction field model in the framework of density functional theory. In this model, the solute molecule is placed in a spherical cavity of radius ao immersed in a continuous medium with a dielectric constant e, treating the solute-solvent electrostatic interactions at the dipole level. The cavity radius is evaluated by determining the molecular volume with a quantum mechanical approach. The solvent effect brings significant changes in the geometrical parameters of some cytosine tautomers, but only very small changes to those of the uracil tautomers. Our results are in good agreement with available experimental results and confirm that the polarization of the solute by the continuum has important effects on the absolute and relative solvation energies. Frequency shifts and intensity variations in the infrared spectra due to the presence of the solvent are also presented. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. I 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 165
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    International Journal of Quantum Chemistry 55 (1995), S. 127-132 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The coupled-cluster method is applied to high sectors of the Fock space (up to five electrons outside a closed shell). Ionization potentials and excitation energies are calculated for atomic N, O, F, P, and S and their ions. The effect of virtual triple excitations is included, exactly or at several levels of appoximation. These terms are important for accurate results in the high sectors. © 1995 John Wiley & Sons, Inc.
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  • 166
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    International Journal of Quantum Chemistry 56 (1995), S. 71-79 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Expressions for moments of spectral density distributions of a many-electron Hamiltonian defined in a finite-dimensional, antisymmetric, and spin-adapted model space (as, e.g., a full configuration interaction space) are derived. The moments are expressed in terms of combinations of two-electron integrals corresponding to a symmetric (a two-electron singlet) and antisymmetric (two-electron triplet) two-electron wave functions. A diagrammatic approach based on Hugenholtz-type diagrams and leading to a simple and universal classification scheme of the terms appearing in the expression for a specific moment is proposed. © 1995 John Wiley & Sons, Inc.
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  • 167
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    International Journal of Quantum Chemistry 56 (1995), S. 91-95 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Relativistic basis sets for first-row atoms have been constructed by using the near-Hartree-Fock (nonrelativistic) eigenvectors calculated by Partridge. These bases generate results of near-Dirac-Hartree-Fock quality. Relativistic total and orbital energies, relativistic corrections to the total energy, and magnetic interaction energies for the first-row atoms have been presented. The smallest Gaussian expansions (13s8 p expansions) yield Dirac-Hartree-Fock total energies accurate through six significant digits, while the largest expansions (18s13p expansions) give these energies accurate through seven significant digits. These results are more accurate than some of the results reported earlier, particularly for the open-shell atoms, indicating that the basis employed is reasonably economical for relativistic calculations. © 1995 John Wiley & Sons, Inc.
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  • 168
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    International Journal of Quantum Chemistry 56 (1995), S. 97-113 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A recently developed algorithm based on the coupled cluster ansatz for the generalized valence-bond perfect-pairing model is adapted for the NDDO class of semiempirical methods. It allows for the calculation of the nondynamic electron correlation and executes as rapidly as the semiempirical molecular orbital method. To assess the interplay of the nondynamic and dynamic electron correlation vs. parameterization, preliminary results are presented for rotation about a double bond, dissociations about single bonds, and the relative stabilities of biradical isomers. © 1995 John Wiley & Sons, Inc.
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  • 169
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    International Journal of Quantum Chemistry 55 (1995), S. 165-171 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The existence of an effective one-particle Hamiltonian in the Brueckner coupled cluster model naturally leads to the definition of an effective interaction G, which is a function of the T2 amplitudes. Two types of approximations to G are proposed: One is purely phenomenological, while the other is based on approximations to the Brueckner T2 equation. In both cases, the resulting effective interaction may be viewed as electron-density-dependent. Generalizing Hartree-Fock theory to accommodate density-dependent interactions (DDHF), a method is obtained that is capable of accounting for correlation effects in an independent particle framework. The heuristic Skyrme force, successfully used in nuclear physics to model nucleon-nucleon interactions, is presented here as an example of an effective electron-electron correlation interaction. Due to the δ-function character of the Skyrme force, it is possible to express the energy in this model by an integral over an energy density, thus formally providing a connection between DDHF and density functional theory for this particular case. An approximation to the Brueckner T2 equation is also proposed in the coordinate representation. In this model, the density-matrix dependence of T2 is reduced to a nonlocal electron density dependence by means of an expansion which introduces terms that depend on the gradient of the density. The first term in this expansion amounts to a “local density approximation” to Brueckner coupled cluster theory. © 1995 John Wiley & Sons, Inc.
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  • 170
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  • 171
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    Topics: Chemistry and Pharmacology
    Notes: The theoretical study of the thermally allowed conrotatory opening of cyclobutene (1) and cis- (2) and trans-1,2-dihydro-1,2-diazacyclobutadiene (3) were performed with ab initio and density functional calculations. The reactants and the transition states were fully optimized by using the 6-31 + G** basis set with RHF, MP2, SVWN, and BLYP methods. The calculated activation barriers for the ring opening of 1 with both MP2 and SVWN incorporating ZPVF correction give extraordinary agreement with the experimental value. The predicted activation energies for 2 and 3 are lower than in the case of the cyclobutene ring opening. Of the two 1,2-dihydro-1,2-diazacyclobutadiene isomers, the trans isomer has a lower activation barrier. The structural and energy differences and the trend among these compounds are interpreted in terms of orbital overlap and steric interactions in the course of the conrotatory ring opening. © 1995 John Wiley & Sons, Inc.
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  • 172
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    International Journal of Quantum Chemistry 56 (1995), S. 157-162 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A relationship between the atomic form factor, F(k), and its first derivative, both at the origin, is presented. A new function f(k), related in a simple way to F(k), has been studied and some applications have been performed. They led us to find lower bounds to F(k) for all k and to other quantities such as the charge density at the origin, ρ(0), and radial expectation values. Finally, interesting effects on the Laplacian of f(k) due to the atomic shell structure were found. © 1995 John Wiley & Sons, Inc.
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  • 173
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    International Journal of Quantum Chemistry 56 (1995), S. 163-173 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An automated method by the algebraic programming language REDUCE3 for specifying the matrix elements expressed in second quantization language is presented and then applied to the case of the matrix elements in the TDHF theory. This program works in a very straightforward way by commuting the electron creation and annihilation operators (a† and a) until these operators have completely vanished from the expression of the matrix element under the appropriate elimination conditions. An improved method using singlet generators of unitary transformations in the place of the electron creation and annihilation operators is also presented. This improvement reduces the time and memory required for the calculation. These methods will make programming in the field of quantum chemistry much easier. © 1995 John Wiley & Sons, Inc.
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  • 174
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    International Journal of Quantum Chemistry 56 (1995), S. 175-186 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This work deals with two shortcomings in the use of Morse potentials to describe energy spectra and transitions of diatomic molecules: (1) Morse's well-known “exact” solution for purely vibrational states includes the unphysical region - ∞ 〈 r 〈 0 of the internuclear separation, and (2) Franck-Condon factors are evaluated in harmonic and anharmonic approximations to the Morse potentials. The method of confining the molecule in a spherical box is developed to obtain (1) purely vibrational energy spectra and eigenvectors of Morse potentials in the physical region 0 ≤ r 〈 ∞, and (2) the corresponding Franck-Condon factors without any additional approximations. The method is applied to Li2, N2, CN, and CO molecules. © 1995 John Wiley & Sons, Inc.
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  • 175
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    International Journal of Quantum Chemistry 56 (1995), S. 129-155 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We show that the irreducible tensor operators of the unitary group provide a natural operator basis for the exponential Ansatz which preserves the spin symmetry of the reference state, requires a minimal number of independent cluster amplitudes for each substitution order, and guarantees the invariance of the correlation energy under unitary transformations of core, open-shell, and virtual orbitals. When acting on the closed-shell reference state with nc doubly occupied and nv unoccupied (virtual) orbitals, the irreducible tensor operators of the group U(nc) ⊗ U(nV) generate all Gelfand-Tsetlin (GT) states corresponding to appropriate irreducible representation of U(nc + nv). The tensor operators generating the M-tuply excited states are easily constructed by symmetrizing products of M unitary group generators with the Wigner operators of the symmetric group SM. This provides an alternative to the Nagel-Moshinsky construction of the GT basis. Since the corresponding cluster amplitudes, which are also U(nc) ⊗ U(ns) tensors, can be shown to be connected, the irreducible tensor operators of U(nc) ⊗ U(nv) represent a convenient basis for a spin-adapted full coupled cluster calculation for closed-shell systems. For a high-spin reference determinant with n, singly occupied open-shell orbitals, the corresponding representation of U(n), n=nc + nv + ns is not simply reducible under the group U(nc) ⊗ U(ns) ⊗ U(nv). The multiplicity problem is resolved using the group chain U(n) ⊃ U(nc + nv) ⊗ U(ns) ⊃ U(nc) ⊗U(ns)⊗ U(nv) ⊗ U(nv). The labeling of the resulting configuration-state functions (which, in general, are not GT states when nc 〉 1) by the irreducible representations of the intermediate group U(nc + nv) ⊗U(ns) turns out to be equivalent to the classification based on the order of interaction with the reference state. The irreducible tensor operators defined by the above chain and corresponding to single, double, and triple substitutions from the first-, second-, and third-order interacting spaces are explicitly constructed from the U(n) generators. The connectedness of the corresponding cluster amplitudes and, consequently, the size extensivity of the resulting spin-adapted open-shell coupled cluster theory are proved using group theoretical arguments. The perturbation expansion of the resulting coupled cluster equations leads to an explicitly connected form of the spin-restricted open-shell many-body perturbation theory. Approximation schemes leading to manageable computational procedures are proposed and their relation to perturbation theory is discussed. © 1995 John Wiley & Sons, Inc.
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  • 176
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    International Journal of Quantum Chemistry 55 (1995), S. 227-235 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio all-electron fully relativistic Dirac-Fock self-consistent field and Dirac-Fock-Breit calculations are reported for the XeF4 molecule at various internuclear distances assuming the experimental D4h geometry with our recently developed relativistic universal Gaussian basis set. The nonrelativistic limit Hartree-Fock calculations were also performed for XeF4 at various internuclear distances. The calculated relativistic correction to the total energy of molecule at the Dirac-Fock level is ∼ -5856 eV, whereas the magnetic part of the Breit correction to the electron-electron interaction is calculated as ∼ 177 eV. The electron correlation effects were included in the nonrelativistic Hartree-Fock calculations using the second-order Møller-Plesset (MP2) theory, and the calculated correlation energy for XeF4 is -71 eV. The basis-set superposition error (BSSE) was estimated by using the counterpoise method for Xe and F. The inclusion of both the relativistic and electron correlation effects in the calculated total energies of F, Xe, and XeF4 predicts the Xe - F bond length and dissociation energy of XeF4 as 1.952 Å and 5.59 eV, respectively, which are in excellent agreement with the experimental values of 1.953 Å and 5.69 eV, respectively, for XeF4. The contribution of the electron correlation and relativistic effects to the dissociation energy of XeF4 is 8.11 and 0.05 eV, respectively. The Breit interaction, however, contributes only 0.02 eV to the dissociation energy of XeF4. Electron correlation is most significant for the prediction of an accurate value of dissociation energy, whereas relativistic effects are very important for the prediction of spin-orbital splitting as well as the energies of the orbitals, especially the inner orbitals of XeF4. © 1995 John Wiley & Sons, Inc.
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  • 177
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    International Journal of Quantum Chemistry 56 (1995), S. 567-575 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A comparative study between proton transfer in H5O2+ and H3O2- has been carried out using the 6-31 + G** basis set at the MP level. An external harmonic force is imposed between the two terminal hydrogens (one on either end of the complex) to restrain the H bond lengths to a range where two minima exist in the potential energy surface, while providing the OH2 and OH- groups appropriate flexibility to approach one another during the course of transfer. The H bond length in the anion is found to be longer and more linear than that in the cation. Geometries and orientations of the subunits play an important role in determining the H bond length and the nonlinearity of the bond. Similar trends are noted for both the ions as the spring stiffens: The barrier reaches its asymptotic maximum for intermolecular force constants larger than about 7 mdyn/Å, as do the equilibrium and transition-state values of R(OO). The energy barrier for the anion is higher than that of the cation. For both systems, the intrinsic reaction coordinate divides the transfer process into two consecutive steps: The approach of the two O atoms is followed by the actual motion of the proton. In fact, the hydrogen-bonded hydrogen moves upward, perpendicular to the line joining the O atoms, during the first step. The first steps account for about 30% of the energy required for proton transfer in the cation, whereas for the anion it is about 45%. © 1995 John Wiley & Sons, Inc.
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  • 178
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    International Journal of Quantum Chemistry 56 (1995), S. 605-608 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: SC-MEH-MO calculations with quasi-relativistic STOS, electron repulsion correlation, and configuration interaction (QR-SCMEH-RCCI) have been extended from the Sm(Cp*)2 results initially reported to the ions Sm(Cp*)+, Sm(Cp*)2+, and the unique tetrameter [Sm(Cp*)]48+. The latter was synthesized and its structure characterized, with the Sm atoms bridged by N2H22-, N2H3-, and NH3 groups. The initial calculations have omitted the bridging lipnds, so as to test the possibility of Sm-Sm bonding since the distances are some 3.55 Å (about 0.05 Å shorter than in Sm metal). © 1995 John Wiley & Sons, Inc.
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  • 179
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    International Journal of Quantum Chemistry 56 (1995), S. 593-604 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio molecular orbital theory has been used to study the various structures of the SiGeH2 system. Utilizing the DZP basis set in conjunction with five correlated methods, the most intricate being coupled-cluster theory including single, double, and perturbative triple excitations [CCSD(T)], a study of the potential energy surface of the SiGeH2 system was conducted. Equilibrium geometries, harmonic vibrational frequencies, dipole moments, and infrared intensities of the nonplanar dibridged structure, asymmetrical monobridged structures, vinylidenelike structures, trans structure, and linear structure are presented. As anticipated, the dibridged structure was the global minimum, with the novel cis monobridges and a vinylidenelike structure being low lying minima as well, lying within 10 kcal mol-1 of the dibridged global minimum. The two monobridged isomers are predicted to be the third and fourth most stable minima. © 1995 John Wiley & Sons, Inc.
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  • 180
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    International Journal of Quantum Chemistry 56 (1995), S. 609-613 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The effects of atomic and molecular electron correlation and Gaunt interaction on the transition energies between the 5D0 and 7F1,2 levels, arising from the 4f6 state of the europium ion, have been studied for the ion and for the [EuO6]9- cluster as it is found in the Ba2GdNbO6 crystal. The calculations were performed using the MOLFDIR program package. The results are compared to work previously done by Visser et al. in which correlation effects had not been taken into account. The effect of the Gaunt interaction is found to be small. An important contribution to the correlation energy emerges from the configuration represented by the double excitations from 4d to 4f. This in agreement with work performed by Jankowski and Sokolowski on Pr3+. The results are now in better agreement with experiment but are still not satisfactory. © 1995 John Wiley & Sons, Inc.
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  • 181
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    International Journal of Quantum Chemistry 56 (1995), S. 627-630 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Variational Monte Carlo techniques are used to compute cross sections for the elastic and inelastic scattering of fast electrons and X-rays by H2. These techniques permit us to use a correlated wave function that would be difficult to handle using conventional techniques. Our results are in good agreement with the best previous calculations. © 1995 John Wiley & Sons, Inc.
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  • 182
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    International Journal of Quantum Chemistry 56 (1995), S. 615-620 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new computer-based theoretical method was developed to study structures and electronic structures of hydrogen-bonded molecules and nanosize clusters, dynamics of proton transfer, and quantum enhancement of reaction rates. While Born-Oppenheimer molecular dynamics (BOMD) simulations allow investigations of the dynamics and thermodynamics of molecules and clusters, this method combines quantum path-integral techniques and density functional theory to treat simultaneously both electrons and hydrogen atoms quantum mechanically. Results from BOMD all-quantum simulations demonstrated the dynamics of proton transfer processes and described the quantum nature of the hydrogen in the protonated systems, respectively. The method also provides a measure of the tunneling enhancement of the “umbrella inversion” in H3O+. © 1995 John Wiley & Sons, Inc.
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  • 183
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    International Journal of Quantum Chemistry 55 (1995), S. 281-289 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A detailed analysis of the performance of the QDPT CI method, which is based on the application of quasi-degenerate perturbation theory (QDPT) within the configuration interaction (CI) approach, is presented by comparing the QDPT CI results and those obtained from the diagonalization of the perturbative space. Calculations of core and valence excitation and ionization spectra of the CO molecule, which is a strongly correlated system, are carried out using a DZ basis set and the accuracy of the eigenvalues and eigenfunctions is checked through the comparison of excitation and ionization energies and intensities. Excellent agreement is obtained for all values, indicating the computational advantages of QDPT CI which is able to explore wide energy ranges without requiring the diagonalization of large spaces. © 1995 John Wiley & Sons, Inc.
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  • 184
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  • 185
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    International Journal of Quantum Chemistry 55 (1995), S. 277-280 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We performed CAS-CI calculations on Li2 using a set of molecular orbitals (MO) optimized with a procedure that, in the case of highly symmetric molecules, permits extraction of a small set of MO out of a large set of atomic orbitals (AO). The dimension of the CAS-CI space was of about 12 million symmetry-adapted determinants. We determined some spectroscopic constants of Li2 with three different atomic basis sets of increasing quality. The values obtained with the largest atomic basis set are very close to the experimental results. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 421-421 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 187
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A brief description of an extension of the time-dependent functional theory to coupled field systems such as electron-ion and electron-electromagnetic fields is given. This theory is further generalized to situations where the system is initially in thermodynamic equilibrium and is subjected to external time-dependent probes which may drive the system out of equilibrium. Such a generalization is based on the Liouvillean quantum field dynamics (LQFD). The above formalism provides a firm physical and mathematical basis for time-dependent simulation procedures such as those based on the Car-Parrinello approach by replacing the fictitious Lagrangian by a precise action principle. Several physical examples are given to illustrate the need for this formalism, where there is a necessity for treating all the field variables on equal footing and in a self-consistent way. A new alternate formalism of time-dependent functional theory based on a novel application of the Baym Φ-derivable method is also given in terms of LQFD. By choosing suitable processes to set up the (D-functional, our functional theory is transformed into a practical self-consistent approach to the quantum many-body equilibrium and transport problems, with built-in conservation laws for all the physically relevant variables). © 1995 John Wiley & Sons, Inc.
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  • 188
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    International Journal of Quantum Chemistry 56 (1995), S. 123-136 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We report quantum chemical semi-empirical calculations of the geometries and the electronic structures (at AM1 and INDO/s levels) of three nonsteroidal antiinflammatory drugs (NSAIDs), namely, benoxaprofen, chlorpromazine and piroxicam, and a piroxicam metabolite, that have undesirable phototoxic effects. Our calculated electronic spectra in gas phase and in water fit reasonably well the observed spectral data. The wavelength of the absorption maxima are not significantly affected by changing from gas phase to water (at the SCRF level). We were able to assign the observed bands to the calculated transitions. We found also that the spectrum of the piroxicam metabolite actually responsible for the phototoxicity cannot be understood on the sole basis of one of the tautomers. We hope that these finding will be useful for the understanding of the photochemical events that lead ultimately to the biological effects. © 1995 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 56 (1995), S. 137-143 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The hydrolytic stability of allylic (IA) and phenolic (IB) esters of novel bifunctional nonpsychotropic cannabinoids, homologs of (+)3S,4S-7-hydroxy-Δ6-tetrahydrocannabinol, is of practical importance due to their possible use as prodrugs. The influence of the bulk and nature of various acyl groups as well as of their position on the base catalyzed hydrolysis has been examined theoretically. Differences (ΔΔHf) between semiempirical heats of formation (ΔHf) of products and reactants were calculated for the formation of the tetrahedral intermediates (IIA, B) which constitutes the rate-determining step of the process. An analysis of the ΔΔHf values and of the calculated optimized lowest energy geometries indicates that formation of II and thus the hydrolysis is most favorable for the trifluoroacetyl and trimethylammoniumacetyl as compared to acetyl, glycyl, and dialkylaminoacetyl esters. The bulk of the acyl group in a series of glycinate esters, increasing in the order COCH2NH2 〈 COCH2NMe2 〈 COCH2NEt2 〈 COCH2N(iPr)2 stabilizes I proportionally, by hindering formation of II. By comparing series IA and IB, the formation of II appears to be generally favored for the phenolic esters compared to the allylic esters due to the release of a more significant steric strain. © 1995 John Wiley & Sons, Inc.
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  • 190
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    International Journal of Quantum Chemistry 56 (1995), S. 155-159 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We examine here spectroscopic properties of oxidized rubredoxin (Rdx) within the intermediate neglect of differential overlap method parameterized for spectroscopy. The Rdx structures are modeled using different length -SR residues bound to the Fe atom and the resulting effect on the absorption spectrum is examined. The corresponding ionization potentials are also calculated, and their dependence on the molecular charge is studied. This study suggests that models used to reproduce the redox properties of these important electron-transfer compounds must be carefully chosen. © 1995 John Wiley & Sons, Inc.
    Additional Material: 3 Ill.
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  • 191
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Theoretical and experimental studies were performed on a series of 1,4- and 1,6-dihydronicotinic acid derivatives to investigate their relative stabilities and factors contributing thereto. Ferricyanide-mediated oxidation studies indicated that not only did the 1,4-dihydropyridine derivatives oxidize more slowly than the 1,6-isomers, a finding consistent with previously published literature, but also that the ratio of the rates of reaction was constant. Thus, the 1,4-dihydropyridines oxidized 23-fold more slowly than did the 1,6-derivatives. Theoretical studies also indicated that the 1,4-dihydropyridines were more stable than the 1,6-isomers, as illustrated by lower calculated heats of formation, and were also more resistant to oxidation, as demonstrated by larger HOMO-LUMO energy gaps. An examination of the HOMO for the dihydropyridines showed that the 1,4-isomers were associated with a greater degree of homoaromatic and hyperconjugative stabilization as compared to the 1,6-dihydropyridines and that these factors did not appear to be significantly affected by substitution. These data suggest that the stabilizing properties associated with the 1,4-dihydropyridine system (i.e., greater contributions from the sp3 ring carbon and attached hydrogens) are systematically expressed providing an explanation for the constant difference in experimental reaction rates. © 1995 John Wiley & Sons, Inc.
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  • 192
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    International Journal of Quantum Chemistry 56 (1995), S. 191-199 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Equilibrium structures of intercalation complexes of different metabolites of polycyclic aromatic hydrocarbons - triol carbocations and diol epoxides - with the dG2 · dC2 dinucleotide are obtained by the AMBER and FLEX empirical force field calculations. Triol carbocations derived from benzo[a]pyrene (BaP) and, especially, 7,12-dimethylbenz[a] anthracene (DMBA) are stereochemically compatible with the dinucleotide and B-DNA. The compatibility is caused by two hydrogen bonds between the quasiaxial hydroxyl groups of triol carbocation and the N(3) atoms of successive guanine residues of the DNA fragment, and a van der Waals contact between the C(12) bay region methyl group and methylene group of the deoxyribose residue of the CC strand. This in turn results in better stacking of the reactive centers and, hence, a “preorganization” of the physical complex to subsequent covalent bonding. A substantial out-of-plane deformation of the triol carbocations induced by the bay region methyl group plays an important role in the stereochemical compatibility, and explains the high carcinogenicity of the syn diastereoisomeric form of DMBA metabolites. Specific structural features of the physical complexes “preorganized” for covalent bonding are described. © 1995 John Wiley & Sons, Inc.
    Additional Material: 5 Ill.
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  • 193
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Leukotrienes and thromboxane A 2 are autacoids derived from arachidonic acid (5, 8, 11, 14-icosatretraenoic acid). They are synthesized in cells by 5-lipoxygenase and thromboxane synthase, respectively. Leukotrienes are related to inflammatory and allergic diseases, while thromboxane A2 is a potent platelet aggregating and vasoconstrictor agent involved in cardiovascular pathologies. In this article we have calculated partial potential energy surfaces at the AM1 level for some 5-lipoxygenase inhibitors, thromboxane synthase inhibitors, thromboxane A2 receptor antagonists, and a dual blocker which inhibits thromboxane synthase and antagonizes thromboxane A2 receptor. Our objective was to identify stereoelectronic properties and topographical requirements for these compounds that could be related to their biological activities. Based on our results and on molecular mechanisms of pharmacological action, we were able to propose new potential 5-lipoxygenase inhibitors and dual blockers derived from pyrazole, pyrrole, 1, 2, 3-triazole, and 1, 2, 4-triazole. © 1995 John Wiley & Sons, Inc.
    Additional Material: 8 Ill.
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  • 194
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    International Journal of Quantum Chemistry 56 (1995), S. 1-1 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 195
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    International Journal of Quantum Chemistry 56 (1995), S. 3-27 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 196
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    International Journal of Quantum Chemistry 56 (1995), S. 41-47 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This article described a theoretical approach for treating chemisorption and surface reactions on metals. Electronic structures are described by an ab initio embedding formalism that permits an accurate determination of reaction energetics and adsorbate structure. Chemisorption energies, adsorbate structures, and the reaction of coadsorbed species are reported for methane thiolate on Ni(111) to illustrate the method. © 1995 John Wiley & Sons, Inc.
    Additional Material: 5 Ill.
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  • 197
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    International Journal of Quantum Chemistry 56 (1995), S. 49-59 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The accurate description of exchange and correlation effects is a key issue in density functional theory (DFT). In spite of its widespread use, the local density approximation (LDA) has well-known deficiencies. In atoms, the empirical correlation energies are of the same magnitude as the errors of the LDA for exchange. This means that an accurate description of exchange in atoms or molecules is a prerequisite for the introduction of Coulomb correlation. One of the methods that today achieve such an accuracy is the weighted density approximation (WDA). Calculations of the exchange and total energies are presented to substantiate this statement. An optimized local-like approximation (OLA) to Coulomb correlation, based on an explicit modeling of the Coulomb hole, is then combined with the WDA for exchange. The results for total energies and other atomic properties look very promising. A combination of the OLA with several generalized gradient approximations (GGAS) for exchange is explored for molecules. © 1995 John Wiley & Sons, Inc.
    Additional Material: 7 Ill.
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  • 198
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    International Journal of Quantum Chemistry 56 (1995), S. 331-337 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ground state total energies and one-electron density matrices are expressed in terms of contour integrals over the electron propagator. Electron binding energies and Feynman-Dyson amplitudes for ionization energies are simply related to ground state properties. Practical expressions for integrals over the Coulson contour are derived. An approximate integration scheme is introduced and compared to exact results. Several approximations in the superoperator Hamiltonian matrix which have been used for familiar self-energy expressions are used to calculate size-extensive total energies and one-electron properties. © 1995 John Wiley & Sons, Inc.
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  • 199
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    International Journal of Quantum Chemistry 56 (1995), S. 313-330 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We begin with a review of past work using a “gauge model” to compare the phase (or gauge) similarities of Hückel's and the Woodward-Hoffmann rules, and the Aharonov-Bohm effect. The conjugated circuits model provides a clearer description of the connection of aromaticity with the band model than previously used. A common attribute is the effect of a circular path enclosing at least one singularity which creates a nonsimply connected manifold in the presence of a vector potential, Ā. This condition leads to Dirac's ambiguity in the resultant magnetic field . A solution is a Dirac-like monopole proposed by Wu and Yang obtained by coordinate patching around the singularity. Another model attribute is the conservation of angular momentum of the molecule plus field. This obtains by consideration of the return flux, which links the circle of atoms in the molecule with a circle of flux, and provides a “linking” of the two circles. The linking is described by one of the oldest topological invariants, the “Gausslinking integral.” By expanding the monopole solution we can describe the linking integral by means of the (S3 → S2) Hopf map, which necessitates adding a Chern-Simons term to describe this effect properly. Following a brief description of the Chern-Simons basis for the Jones-Witten topological knot theory, we conclude that there are three possible factors which could be responsible for the WH/Hückel 4n + 2 effect: curvature, torsion, and writhing. In this model the monopole (curvature) accounts for the 2, the torsion (orbital) effect for 4n, and the writhing (spin) for 0. Because a topological theory has no metric, it has no size dependence; hence, the model will support a “shell structure” of the periodic table based on 4n + 2. We close with a discussion of the integer quantum Hall effect (IQHE), where the commutivity of translation operators is combined with gauge transformations, thereby defining magnetic translation operators. The same selection rule for commutivity of the magnetic translation operators in the IQHE seems to apply in 4n and 4n + 2 ring compounds. © 1995 John Wiley & Sons, Inc.
    Additional Material: 17 Ill.
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  • 200
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    International Journal of Quantum Chemistry 56 (1995), S. 339-347 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A commutator algebra procedure is used to get improved recurrence relations for the calculation of any f(r) off-diagonal two-center matrix elements in the general case of displaced arbitrary central potential wave functions. As expected, the proposed formulas reduce properly to the generalized recursion equations for the calculation of one-center integrals. Besides, when f(r) = rk, one obtains the equivalent of the Kramer rule for two-center multipolar matrix elements for arbitrary potentials, and when f(r) is constant, the Wu formula (for the calculation of Franck-Condon factors) is ameliorated in the sense that the new relation not necessarily considers equal mass. Furthermore, all diagonal matrix elements as well as all off-diagonal integrals between nondisplaced potentials appear, in our treatment, as particular cases in good agreement with already published results. As a useful application, the corresponding recurrence relations for the calculation of one-center hydrogenic matrix elements and two-center Kratzer potential integrals are given as examples. However, our approach is general and can be easily extended to obtain recursion formulae for other potential wave functions. © 1995 John Wiley & Sons, Inc.
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