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  • 2020-2023
  • 1985-1989  (432)
  • 1965-1969  (4)
  • 1987  (432)
  • 1966  (4)
  • Computational Chemistry and Molecular Modeling  (406)
  • Cat
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Years
  • 2020-2023
  • 1985-1989  (432)
  • 1965-1969  (4)
Year
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Anatomy and embryology 177 (1987), S. 51-54 
    ISSN: 1432-0568
    Keywords: Development ; Thyroid “C” cell ; Cat ; Immunohistochemistry ; Calcitonin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The presence of calcitonin in the cat thyroid was studied immunohistochemically in a series of gland development. the first positive cells are to be found on the 38th day of gestation, i.e. 1–2 days after level nine of ontogenetic development has been reached. The cytoplasm of these cells form only a narrow border round the nucleus. With advancing development the bumber of calcitonin-positive and its amount increases. From approximately the 50th day of prenatal development, the initially diffusely scattered, solitary calcitonin-positive cells are gradually replaced by groups of cells, which begin to occupy a characteristic position in relation to the follicular epithelium. The largest quantity of calcitonin-positive cells is found in foetuses about to be born. In non-pregnant adult cats, the incidence of immunohistochemically calcitonin-reactive cell is more sporadic and their distribution in the lobes of the thyroid is uneven.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Anatomy and embryology 177 (1987), S. 131-138 
    ISSN: 1432-0568
    Keywords: Capillaries ; Tooth pulp ; Tight junctions ; Odontoblasts ; Ultrastructure ; Mineralisation ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The relative roles of capillaries and odontoblasts in the process of dentinogenesis and in pulp reactions to trauma and pathology are not clear. Contributing to the problem is the paucity of information on odontoblast —capillary relationships and tight junctions between odontoblasts. Using light microscopy the capillaries have now been examined in semithin transverse sections of perfusion fixed teeth at different positions in the long axis from the apical foramina to the pulp horns. Odontoblastic capillaries were prominent in the coronal and middle regions of canines and present at the same levels of incisors. In the pulp horns and just coronal to the pulp horns capillaries were all subodontoblastic but near the apex there were also a few odontoblastic capillary profiles. Transmission electron microscopy on ultrathin sections revealed that a high proportion of middle and coronal odontoblastic capillary profiles were fenestrated but subodontoblastic profiles coronal to the pulp horns were the most fenestrated. In a search for tight junctions in ultrathin sections some typical strands were observed between odontoblasts. The difficult of obtaining the latter evidence was explained by the cellular arrangement of the odontoblasts which differed markedly from an ideal parallel, apically coplanar arrangement. The results question the possibility that there is a direct exchange of materials between pulp capillaries and dentine in teeth of limited growth and provide a baseline for future experiments to test the permeability of the odontoblast layer.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-0533
    Keywords: Experimental communicating syringomyelia ; Ependyma ; Spinal cord ; Cat ; Scanning electron microscope
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary A hydrocephalic-hydromyelic condition was induced in adult cats by causing the closure of the lateral apertures with intracisternal injections of kaolin. After displaying the symptoms characteristic of increased intracranial pressure, which lasted about 10–14 days but varied somewhat in intensity from animal to animal, the cats recovered. From approximately the 2nd post-operative week onward, a distended central canal was revealed by ventriculography; subsequently cavities developed in the tissue of the cord that communicated with the canal. Most cavities were located dorsal to the canal. The surfaces of the distended canal and the cavities showed that in ventral areas the ependyma streched but remained intact, whereas in dorsal areas it ruptured, exposing the nerve fibers to the cerebrospinal fluid (CSF). In cats which had been hydrocephalic for up to 2 years the walls of the cavities were covered by gliotic scar tissue; the nerve fibers were no longer exposed directly to the CSF.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 66 (1987), S. 522-532 
    ISSN: 1432-1106
    Keywords: Off-vertical-axis rotation ; Eye movements ; Vestibulo-ocular reflex ; Optokinetic nystagmus ; Otoliths ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Horizontal and vertical eye movements were recorded from cats in response to either a) off-vertical axis rotation (OVAR) at a range of velocities (5–72 deg/s) and a range of tilts (0–60 deg) or b) horizontal (with respect to the cat) optokinetic stimulation (10–80 deg/s), also around a range of tilted axes (0–60 deg). The responses to stopping either of these stimuli were also measured: post-rotatory nystagmus (PRN) following actual rotation, and optokinetic after nystagmus (OKAN) following optokinetic stimulation. The response found during OVAR was a nystagmus with a bias slow-phase velocity that was sinusoidally modulated. The bias was dependent on the tilt and reached 50% of its maximum velocity (maximum was 73±23% of the table velocity) at a tilt of 16 deg. The phase of modulation in horizontal eye velocity bore no consistent relation to the angular rotation. The amplitude of this modulation was roughly correlated with the bias with a slope of 0.13 (deg/s) modulation/(deg/s) bias velocity. There was also a low-velocity vertical bias with the slow-phases upwardly directed. The vertical bias was also modulated and the amplitude depended on the bias velocity (0.27 (deg/s) modulation/ (deg/s) bias velocity). When separated from the canal dependent response, the build up of the OVAR response had a time constant of 5.0±0.8 s. Following OVAR there was no decline in the time constant of PRN which remained at the value measured during earth-vertical axis rotation (EVAR) (6.3±2 s). The peak amplitude of PRN was reduced, dependent on the tilt, reaching only 20% of its EVAR value for a tilt of 20 deg. When a measurable PRN was found, it was accompanied by a slowly-emerging vertical component (time constant 5.4±2s) the effect of which was to vector the PRN accurately onto the earth horizontal. OKN measured about a tilted axis showed no differences in magnitude or direction from EVAR OKN even for tilts as large as 60 deg. OKAN following optokinetic stimulation around a tilted axis appeared normal in the horizontal plane (with respect to the animal) but was accompanied by a slowly emerging (time constant 4.1±2 s) vertical component, the effect of which was to vector the overall OKAN response onto the earth horizontal for tilts less than 20 deg. These results are compared with data from monkey and man and discussed in terms of the involvement of the velocity storage mechanism.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 66 (1987), S. 589-596 
    ISSN: 1432-1106
    Keywords: Contrast gain control ; Lateral geniculate nucleus ; Temporal frequency ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary This paper describes the temporal tuning of cells in the lateral geniculate nucleus of the cat (27 X cells, 51 Y cells) and how this changes with stimulus contrast. Drifting sinusoidal gratings of optimal spatial frequency were presented at 7 temporal frequencies (0.5, 1, 2, 4, 8,16 and 32 Hz) and 4 contrasts (10, 20, 40, 80%). For some cells response growth at all temporal frequencies was proportional to changes in contrast. Thus, their temporal tuning functions, on log-log axes, were displaced vertically with increasing contrast. This shift also largely characterizes the response to low temporal frequencies of the other neurons studied. For these other cells, however, responses to high temporal frequencies grew disproportionately large with increasing contrast generally causing their tuning functions to change shape. Typically the peaks of these functions shifted to higher frequencies at higher contrasts. Most of the X cells studied displayed behavior of the first type, while Y cells usually followed the second pattern. This qualitative impression was confirmed quantitatively. Cubic spline functions were fit to the temporal tuning functions obtained at different contrast levels and the peaks of the curves were extracted. X and Y cells preferred similar temporal frequencies at low contrast levels (X mean=8.1 Hz; Y mean=8.4 Hz) but Y cell values were significantly higher at higher contrasts (80%) (X mean= 12.0 Hz; Y mean=16.8 Hz). These contrast-dependent changes in the temporal characteristics of geniculate cells resemble those described for retinal ganglion cells by Shapley and Victor (1978 and subsequent). Thus, the gain control behavior of geniculate cells probably reflects the temporal properties of their retinal inputs with relatively little modification.
    Type of Medium: Electronic Resource
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  • 6
    ISSN: 1432-1106
    Keywords: Ocular dominance ; Plasticity ; Noradrenaline ; Cat ; Visual cortex ; Squint effect
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary In anesthetized and paralyzed cats, the normal alignment of the visual axes is disturbed by paralysis of the eye muscles. Thus, the separation between paired receptive fields of binocular cells in visual cortex is increased (paralysis squint). This increased separation is normally tolerated by the majority of visuocortical cells, about 80% of them being binocularly driven (Hubel and Wiesel 1962). It was shown previously that neuronal plasticity in visual cortex can be enhanced in both normal adult cats (Kasamatsu et al. 1979) and kittens (Kuppermann and Kasamatsu 1984) by intracortical microinfusion of noradrenaline (NA). In the present study we tested whether the usual range of disparity produced by the paralysis squint is sufficient to induce ocular dominance changes in visual cortex of adult cats when the neuronal plasticity is enhanced by NA. NA was continuously infused into visual cortex throughout the experiments. The period of the paralysis squint varied from experiment to experiment between 9 and 47 h. We found: (1) These short periods were sufficient to produce a marked reduction in the proportion of binocular cells. (2) The proportion decreased linearly with increasing the duration of the squint period at a rate of 0.17 per 10 h up to about 22 h. (3) At longer durations the average binocularity remained at about 0.30 and could not be further reduced in the present paradigm. (4) The binocularity seemed to decrease with increasing separation of paired receptive fields. (5) Binocularity increased again toward the normal value after optical correction of the squint. (6) The amount of increased binocularity was linearly correlated with the duration of the period after the squint correction. (7) The binocularity increased at a rate of 0.18 per 10 h, reaching the normal value in less than 30 h. We thus concluded that if visuocortical plasticity is maintained at a high level through the continuous infusion of NA it is possible to change the ocular dominance distribution in the mature visual cortex by manipulations of the alignment of the visual axes even in the acutely anesthetized and paralyzed condition.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 65 (1987), S. 549-558 
    ISSN: 1432-1106
    Keywords: Area 19 ; Sinusoidal grating ; End-zone inhibition ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary We have recorded extracellularly from single cells in area 19 of the cat for the purpose of providing a quantitative description of response characteristics. A prominent feature of this area is a high incidence of cells that are end-stopped. Drifting sinusoidal gratings were used to determine spatial and temporal characteristics of the discharge region. In addition, we have conducted independent tests to characterize end zones of receptive fields. When a grating patch was used to stimulate the discharge region alone, all of the cells showed a band-pass spatial frequency tuning characteristic. The optimal spatial frequency ranged from 0.1 to 1.13 cycles/deg, and the distribution had a peak at 0.4 cycles/deg. The bandwidth at half peak amplitude ranged widely from 0.7 to 3.3 octaves (mean 2.0 octaves). When gratings were also presented to the end zones, responses to stimulation of the central region were suppressed. The surround was phase-insensitive in that the relative phase between the grating in the two regions generally did not affect the strength of the suppression. To determine spatial characteristics of the end-zone inhibition, the spatial frequency of the end-zone grating was changed while that for the central pattern was fixed. All cells showed a bandpass characteristic for end-zone inhibition, but in each case, the tuning width was broader than that for excitation. The mean spatial frequency bandwidth of end-zone inhibition was 2.7 octaves. The peak of the inhibition generally coincided with the peak of the excitatory spatial frequency tuning of the discharge center. Considered together, these results show that neurons in area 19 share common properties with those in areas 17 and 18, but they exhibit phase-insensitve end-zone inhibition more frequently.
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1432-1106
    Keywords: Postural reflexes ; Unexpected postural perturbations ; Electromyographic activity ; Hindlimb muscles ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Cats respond to drop of the support from beneath a single limb with the “diagonal stance response” (Coulmance et al. 1979). They load the limbs on the diagonal opposite to the one containing the dropped limb and unload the third supporting limb in the diagonal containing the dropped limb. Characteristic biomechanical delays in limb motion and in vertical force changes imposed upon the limbs are observed. These delays range from 30 to 45 ms, depending upon the location of the dropped limb. This study describes the kinematics of the “diagonal stance response” and the activation of selected agonist-antagonist muscle pairs acting on the joints of the hindlimb during the response. Proximal and distal hindlimb muscles respond to perturbations in groups that are appropriate to the vertical forces imposed upon the limb. When the hindlimb containing the recording electrodes is loaded by drop of the contralateral hindlimb or the ipsilateral forelimb medium latency (25–45 ms) EMG responses occur in the extensors. This response serves to stiffen the limb against the increased vertical force of loading. A similar response is observed when the hindlimb is reloaded after being dropped. In this case, however, short latency responses precede the medium latency responses in muscles that are passively stretched by the limb drop. When drop of the diagonal forelimb unloads the hindlimb containing the electrodes, medium latency responses are observed in the distal hindlimb flexors, which indicates that the unloading is evoked in part by active lifting of the limb. In most cases, the medium latency responses precede or are coincident with the changes in force imposed on the limb, suggesting that the observed responses are centrally programmed.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 66 (1987), S. 10-20 
    ISSN: 1432-1106
    Keywords: Corticothalamic feedback ; Binocular rivalry ; Lateral geniculate ; Vision ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Single unit activity was recorded from principal cells in the A-laminae of the cat dorsal lateral geniculate nucleus (dLGN). A steady state pattern of afferent activation was induced by presenting a continuously drifting square wave grating of constant spatial frequency to the eye (the dominant eye) that provided the excitatory input to the recorded cell. Intermittently, a second grating stimulus was presented to the other, nondominant, eye. In most neurones nondominant eye stimulation led to inhibition of relay cell responses. The latency of this suppressive effect was unusually long (up to 1 s) and its intensity and duration depended critically on the similarity between the gratings that were presented to the two eyes. Typically suppression was strongest when the gratings differed in orientation, direction of movement and contrast and when the nondominant eye stimulus was moving rather than stationary. Ablation of visual cortex abolished these long latency and feature-dependent interferences. We conclude that the visual cortex and the corticothalamic projections are involved in the mediation of these interocular interactions. We interpret our results as support for the hypothesis that corticothalamic feedback modifies thalamic transmission as a function of the congruency between ongoing cortical activation patterns and afferent retinal signals.
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 66 (1987), S. 435-439 
    ISSN: 1432-1106
    Keywords: Bradykinin ; Tooth-pulp ; Cortical neuron ; Coronal gyrus ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The properties of single cortical neurons responding to electrical stimulation of the tooth-pulp and to intrapulpal application of bradykinin were studied in the cat. The activities of tooth-pulp driven neurons (TPNs) were recorded from the middle and anterior parts of the coronal gyrus of the cerebral cortex. Bradykinin-sensitive tooth-pulp driven neurons (BK-TPNs) were located in layer IV of area 3b of the anterior part of the coronal gyrus. These neurons had a large cutaneous oro-facial receptive field and received a nociceptive input from the facial skin as well as from the tooth-pulp. The BK-TPNs had a higher threshold and longer latency to electrical stimulation than TPNs insensitive to bradykinin (non BK-TPNs). These findings suggest that BK-TPNs in this cortical area may be involved in sensory processing of noxious information from trigeminal regions.
    Type of Medium: Electronic Resource
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  • 11
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 66 (1987), S. 555-564 
    ISSN: 1432-1106
    Keywords: Preoptic region ; Frontal cortex ; Medial basal hypothalamus ; Electrophysiology ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Responses of single preoptic neurons to electrical stimulation of the medial frontal cortex, the mediobasal hypothalamus (MBH) and the medial forebrain bundle (MFB) were recorded in anaesthetised cats. Single pulse stimulation of the medial frontal cortex orthodromically drove 96 otherwise quiescent preoptic neurons, which were found more frequently in the dorsal preoptic region, inhibited 53% of the spontaneously active preoptic neurons and excited 16%. Testing of cortically influenced preoptic neurons with MBH or MFB stimulation resulted in antidromic invasion of 6% (MBH) and 9% (MFB). Convergence of orthodromic inputs from medial frontal cortex and MBH was detected in 78% of spontaneously active preoptic neurons, and three-way convergence including input from MFB was noted in 17% of neurons tested with all stimulators. Some cortex-responsive neurons were found to also respond to vaginal or anal probing, paw squeezing and haemorrhage. The role of this input to the preoptic region from medial frontal cortex remains to be elucidated, but may include neuroendocrine, behavioural and homeostatic functions.
    Type of Medium: Electronic Resource
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  • 12
    ISSN: 1432-1106
    Keywords: Corticopontine collaterals ; Corticotectal neurons ; Cortex ; Cat ; Fluorescent tracers
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The fluorescent double-labeling technique has been used to determine whether the corticopontine and the corticotectal fibers in the cat are derived from two different sets of neurons or whether they are derived from branching neurons which distribute collaterals to the pontine grey and the colliculi. After unilateral DY.2HCl injections in the pontine grey and FB injections in the ipsilateral colliculi, large numbers of FB-DY.2HCl double-labeled neurons were present in the cortex of the ipsilateral hemisphere. However, the labeled neurons in its rostral part may have represented pyramidal tract neurons which were labeled retrogradely because their fibers descended through the DY.2HCl injection area. Therefore, also DY.2HCl injections were made in the pyramid (i.e. caudal to the pons) and the cortical pyramidal tract area, containing the retrograde DY.2HCl-labeled neurons, was delineated. In the rest of the experiments only the DY.2HCl-labeled neurons in the caudal two thirds of the hemisphere (outside the pyramidal tract area) were taken into account because only these neurons could, with confidence, be regarded as corticopontine neurons. In some anterograde HRP transport experiments the trajectories of the corticotectal and the corticopontine fibers were visualized. On the basis of the findings the DY.2HCl injections in the pontine grey were placed such that they could not involve any of the corticotectal fibers passing from the cerebral peduncle to the colliculi. Thus artifactual doublelabeling of cortical neurons was avoided. However, also under these circumstances many double-labeled neurons were present in the caudal two thirds of the hemisphere. This led to the conclusion that in the cat a large proportion of the corticopontine neurons in the caudal two thirds of the hemisphere represent branching neurons which also distribute collaterals to the colliculi. The parietal (anterior part of the lateral gyrus, middle and posterior suprasylvian gyri) and the cingulate areas together contained three quarters of all labeled corticopontine neurons outside the pyramidal tract area. In the parietal areas roughly 25% of them were double-labeled and in the cingulate area 14%. However, in the visual areas 18 and 19 a much larger percentage (30–60%) was doublelabeled. In a recent study from our laboratory it was found that in the cat the pyramidal tract fibers distribute an abundance of collaterals to the pontine grey. Therefore, a large proportion of all corticopontine connections in this species appear to be established by branching neurons which also distribute fibers to other cell groups in the brain stem and the spinal cord.
    Type of Medium: Electronic Resource
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  • 13
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 65 (1987), S. 703-706 
    ISSN: 1432-1106
    Keywords: Cat ; Electrophysiology ; Lateral geniculate cells ; Signal detection ; Visual latencies
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The latencies of visually-evoked responses from X- and Y-type neurons of the cat's dorsal lateral geniculate nucleus were measured in a manner that takes account of the inherent variability of discharge in these cells. Latencies measured in this way vary from trial to trial in one cell (and also between cells) by tens to as much as hundreds of milliseconds. This variability in the time for generation of reliable responses suggests that the much emphasized conduction advantage of the Y pathway plays a minor role in the detection of visual stimuli by the cat.
    Type of Medium: Electronic Resource
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  • 14
    ISSN: 1432-1106
    Keywords: Joint ; Spinal cord ; Pain ; Ascending tracts ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary 1.Responses were recorded from 160 ascending tract cells in segments L4 to L6 of the spinal cord in chloralose anaesthetized, spinalized cats. The tract cells were identified by antidromic activation following stimulation of pathways in the lateral and ventral funiculi at the level of the spinal cord transection at the thoracolumbar junction. Axonal conduction velocities ranged from 9 to 114 m/s. 2. A sample of 152 of the neurones examined could be subdivided according to the distribution of their receptive fields into 49 cells activated just from receptors located in skin (“s” cells), 17 neurones excited by receptors in deep tissues (“d” cells), 15 units with a convergent input from receptors in skin and deep tissues (“sd” cells), and 25 neurones with a convergent input from the knee joint and either skin (“sj” cells), deep tissues (“dj” cells) or both (“sdj” cells). No receptive fields could be demonstrated for the remaining 46 neurones. 3. “S” and “sj” cells were found almost exclusively in the dorsal horn, whereas many “d”, “sd”, “sdj” and “dj” units were in the ventral horn. Almost all of the cells that lacked receptive fields were in the ventral horn or intermediate grey. 4. Ninety-one of 158 cells (56%) demonstrated no background activity. Of these, 43 cells (27%) lacked receptive fields. Many of the silent neurones were in the ventral horn, but some were in the dorsal horn. Of 25 cells having knee joint input, 18 (72%) had background activity. 5. All of the neurones that had a receptive field in the knee joint also had a convergent input from receptors in other tissues. In 3 cases, there was a receptive field in the skin over the foot (“sj” cells). For 16 cells, receptive fields included not only the knee joint but also skin and deep tissue (“sdj” cells). Usually, the cutaneous receptive field was near the knee joint, but sometimes it was remote, such as on the foot. The deep receptive fields were chiefly in the muscles of the thigh and/or leg. For 6 “dj” cells, the receptive fields included not only the knee joint but also deep fields like those of “sdj” cells. 6. Cutaneous receptive fields were classified as “low threshold” (cells excited best by innocuous intensities of mechanical stimulation), “wide dynamic range” (cells activated by weak mechanical stimuli, but the best responses were to noxious stimuli) or high threshold (innocuous stimuli had little effect, but noxious mechanical stimuli produced a vigorous discharge). Similarly, stimulation of the knee joint with weak mechanical stimuli could excite some neurones, while others could be activated by weak or strong articular stimuli but were excited best by noxious stimuli, and still other neurones were activated by knee joint stimuli only if the intensity was noxious. 7. In several instances, contralateral receptive fields were noted. These were generally in deep tissue or in the knee joint. 8. It was concluded that many of the responses to articular stimulation of the spinal cord ascending tract cells examined in this study could have been mediated by the fine afferent fibres that supply the knee joint. Although further work will be required to determine which particular ascending tracts transmit nociceptive information concerning the knee joint, it can be proposed that many of the responses demonstrated here were likely to play a role in either joint pain of in triggering responses associated with joint pain.
    Type of Medium: Electronic Resource
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  • 15
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 67 (1987), S. 291-298 
    ISSN: 1432-1106
    Keywords: Lateral inhibition ; Lateral excitation ; Cat ; Dorsal lateral geniculate nucleus ; GABA ; Silent synapses
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Visual responses were elicited by global phase reversal stimuli in cells of the cat dorsal lateral geniculate nucleus (dLGN) after small retinal lesions had been centered on each receptive field. After acute lesions of different sizes exclusively lateral inhibition was found. When GABAergic inhibition was blocked by continuous microiontophoretic application of bicuculline lateral excitation emerged in dLGN cells partially deafferented by small and medium size acute retinal lesions, but not in those affected by large lesions. This indicates the presence of excitatory retinal inputs at the periphery of the dLGN cell dendrites which are normally suppressed by strong, long-ranging lateral inhibitory processes. After chronic deafferentation, the remaining excitatory inputs increase in effectiveness and lateral excitation is seen without blockade of inhibition. The maximal lateral spread of excitation (300 μm) in the dLGN is distinctly smaller than the extent of lateral inhibition (1000 μm).
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  • 16
    ISSN: 1432-1106
    Keywords: Postural reflexes ; Unexpected postural perturbations ; Electromyographic activity ; Motor control ; Hindlimb muscles ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The active components of the quadrupedal diagonal stance response to rapid removal of the support from beneath a single limb were studied in cats to further define the mechanisms that trigger and generate the response. We recorded EMG activity from lateral gastrocnemius and tibialis anterior muscles in awake, behaving cats while they stood on an hydraulic posture platform. By dropping the support from beneath a single limb, we evoked the diagonal stance response, with its characteristic changes in vertical force and EMG patterns. As the animal responded to this drop, a second perturbation of posture was then presented at intervals of 10 to 100 ms following the first. This second perturbation, which consisted of dropping the support from beneath the two limbs that were loaded as a result of the initial limb drop, made the first response biomechanically inappropriate. The EMG responses observed in both muscles during paired perturbations were triggered by the somatosensory events related to the perturbations. Muscle responses that were appropriate for the first perturbation always occurred with amplitudes and latencies similar to control trials. This was true even when the second perturbation occurred 10–20 ms after the first, that is, when this perturbation either preceded or was coincident with the response to the initial limb drop. The EMG responses that were normally associated with the second perturbation were delayed and/or reduced in amplitude when the time interval between perturbations was short. As the inter-perturbation interval was lengthened beyond 60–100 ms, however, EMG responses to the second perturbation were unaffected by the occurrence of the first perturbation. When the hindlimb containing the recording electrodes was dropped as part of the second perturbation, a myotatic latency response was observed in tibialis anterior. The amplitude of this response to the second perturbation was greater than controls when this displacement was presented during the period between initiation of the first perturbation and execution of the response to it. When the second displacement was presented after execution of the first response began, the amplitude of the myotatic response was reduced below control levels. While the results do not preclude the possibility that these “automatic” postural responses are segmental or suprasegmental reflexes, they support the hypothesis that the active component of the response to drop of the support beneath a single limb is centrally programmed and that the appropriate response can be riggered very rapidly by the somatosensory information signalling the perturbation.
    Type of Medium: Electronic Resource
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  • 17
    Electronic Resource
    Electronic Resource
    Springer
    Experimental brain research 68 (1987), S. 661-666 
    ISSN: 1432-1106
    Keywords: Visual cortex ; Ocular dominance columns ; Flat-mount ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Ocular dominance (OD) columns in the cat visual cortex were visualized with autoradiography after intravitreal injection of (3H)proline. Extending previous studies, a flat-mount technique was applied that enabled the analysis of the distribution of label throughout extensive regions of the visual cortex without requiring reconstructions from serial sections. OD-columns were confined to layer IV and consisted of isolated patches and short bands. The latter were parallel to each other and regularly spaced, the main trajectory being orthogonal to the 17/18 border. This pattern of the geniculo-cortical terminals was similar in the hemispheres ipsi- and contralateral to the injected eye. The mean periodicities of the OD-bands were virtually identical in the two hemispheres of the same animal: 850 μm and 830 μm in cat D1 and 770 μm and 800 μm in cat D2. However, the ipsilateral OD-columns appeared smaller, more heavily labeled and more sharply delineated than the contralateral columns.
    Type of Medium: Electronic Resource
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  • 18
    ISSN: 1432-1106
    Keywords: Joint ; Pain ; Inflammation ; Spinal cord ; Ascending tracts ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary 1. Recordings were made from 16 ascending tract cells in the spinal cords of anaesthetized, spinalized cats before and after an acute arthritis was produced by injection of kaolin and carrageenan into the knee joint. 2. The responses tested routinely were to passive flexion of the knee, an innocuous movement. In some cases, responses to other movements were also tested, and changes in background discharge rates were monitored. 3. Control recordings for a period of 1 h or in 3 cases of 3 h indicated that the responses to flexion were reasonably stationary. 4. Four tract cells that initially showed little or no response to flexion of the knee joint developed large responses within 1 to 2 h after inflammation of the joint. 5. Another 9 cells were tested that had responses to flexion of the knee joint prior to inflammation. In 6 cases, inflammation produced enhanced static or transient responses. In 2 cases, the effect of flexion was initially inhibitory or variable, but after inflammation these cells showed large excitatory responses. In the other case, inflammation had no effect. Background discharges were increased by inflammation in 6 of these 9 cells. 6. The effect of inflammation of the knee joint was tested on 3 tract cells that had no clearly defined receptive field in the knee. In 1 case, a response developed to knee flexion after acute inflammation was produced. In the other 2 cases, there were initially responses to knee flexion, but these were unchanged by inflammation. 7. Two of the cells tested had bilateral receptive fields in or around the knee joints. Inflammation of one knee joint enhanced the responses to flexion of the same but not of the contralateral knee in one case but greatly increased the responses to flexion of both knees in the other case. 8. Injections of prostaglandin (PGE2) caused an enhancement of the responses to knee flexion beyond that caused by inflammation in 5 of 7 cases. One cell whose responses to flexion of the knee were unaffected by inflammation showed inhibitory responses to prostaglandin injections into the inflamed knee joint. 9. The effects of inflammation on the responses of ascending tract cells of the spinal cord appear to serve as a useful neural model of the events responsible for the development of arthritic pain.
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  • 19
    ISSN: 1432-1106
    Keywords: Entorhinal area ; Current source density ; Olfactory afferents ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The distribution of the olfactory afferents within the ventrolateral part of the entorhinal cortex (EC) was studied by means of field potentials evoked by stimulation of the olfactory bulb (OB) and the olfactory cortex (PPC). Depth profiles of the field potentials evoked by OB or PPC stimulation were studied using current source density analysis. After OB or PPC stimulation an early superficial sink-deep source configuration was found, which some time later reversed into a superficial source-deep sink. Both OB and PPC activated mainly the superficial dendrites of the cells of layers II and III. In layers II and III evidence for strong recurrent inhibition was found, using double pulse stimulation. The results indicate that there exists a common basic design of the synaptic organization of the olfactory areas of the base of the brain extending to the EC.
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  • 20
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    Experimental brain research 68 (1987), S. 179-188 
    ISSN: 1432-1106
    Keywords: Ammon's horn ; Hippocampus ; Septum ; Dentate gyrus ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Direct projections from Ammon's horn to the septum were studied in the cat by the anterograde tracing method after injecting WGA-HRP (wheat germ agglutinin-horseradish peroxidase conjugate) into Ammon's horn. The results were further confirmed by the retrograde WGA-HRP method after injecting WGA-HRP into the septum. Pyramidal neurons in fields CA1, CA2 and CA3 were observed to send their axons ipsilaterally to the lateral septal nucleus; the septal parts of the hippocampus sent projection fibers to the dorsomedial portions of the lateral septal nucleus via the medial aspects of the subcallosal fornix, while the hippocampal regions successively more proximal to the temporal pole sent projection fibers to progressively more ventrolateral portions of the lateral septal nucleus via more lateral aspects of the subcallosal fornix. It was also found that the septal parts of fields CA1, CA2 and CA3 sent projection fibers bilaterally to the dorsomedial aspects of the lateral septal nucleus. Field CA4 appeared to send projection fibers only sparsely, if at all, to the medial septal nucleus. The rudimentary parts of the hippocampal formation, taenia tecta and indusium griseum, were found to have reciprocal ipsilateral connections with the dorsal portions of the lateral septal nucleus.
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  • 21
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    Experimental brain research 68 (1987), S. 305-310 
    ISSN: 1432-1106
    Keywords: Binocular interaction ; Lateral geniculate nucleus ; Cat ; Retinal disparity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary We have investigated binocular interaction in the dorsal lateral geniculate nucleus (LGN) of the cat. Neurons were recorded extracellularly during visual stimulation with sinusoidal gratings which were presented at different interocular phases (disparities). The large majority of cells (91%) exhibited some type of binocular interaction. For 75% and 16% of the total number of cells, the binocular interaction was inhibitory or facilitatory, respectively. For the remaining 9% of cells, no interaction was evident. In marked distinction from visual cortex, the facilitatory and inhibitory interactions in the LGN are independent of the relative interocular phase of the patterns. Neurons in the LGN are therefore insensitive to the stereoscopic depth cue, retinal disparity.
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  • 22
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    Experimental brain research 68 (1987), S. 379-392 
    ISSN: 1432-1106
    Keywords: Cat ; Inferior colliculus ; Single cell recording ; Binaural hearing ; Time/intensity trading
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary 1. Binaural neurones were recorded in the central nucleus of the cat inferior colliculus and were stimulated with tone and noise bursts. Closed field sound systems were used to produce independent interaural time (ITD) and intensity (IID) differences. Particular attention was paid to high frequency (above 2 kHz) cells. 2. Three main types of binaural neurone were found: High frequency excitatory-inhibitory neurones (EI cells), excited by input from the contralateral ear and inhibited by ipsilateral input, high frequency excitatory-excitatory cells (EE cells), excited by inputs from either ear and low frequency cells sensitive to interaural phase differences (IPD cells). 3. The EI cells had characteristics similar to those of IE cells in the contralateral lateral superior olive. They were sensitive to envelope ITDs (most cells) and IIDs (all cells) favouring the contralateral ear. The response of these cells increased with increasing contra lead ITDs or contra loud IIDs up to values well outside the physiological range. 4. Low frequency binaural cells were sensitive to interaural phase differences (IPDs). The peak response was often in the contralateral physiological range and the response was unaffected by IIDs. 5. Many high frequency EE cells were sensitive to envelope ITDs. These units were relatively unaffected by IID. Although the ITD sensitivity of these cells was generally less than that of the IPD cells, the peak response of the ITD curve was also often in the contralateral physiological range. 6. Some of the high frequency EI and EE cells were sensitive to ongoing time differences (OTDs) in white noise signals, i.e. they showed ITD response curves to carrier only shifted noise bursts. 7. The EI cells often showed recovery from inhibition at large ipsilateral lead. This tendency was increased as the sound pressure level on the inhibitory side was lowered and by the use of click stimuli. Similarly, cycles of suppression could be seen to follow excitation in some EE cells. The time course of these effects was in the order of hundreds of μs. 8. Binaural characteristics (degree of ITD, IID or OTD sensitivity) showed considerable interunit variation within each cell type. These variations were also affected by signal type (tone or noise bursts) and did not appear to be correlated with best frequency, nature of the tuning curve or PSTH type. We suggest that the time course of the inhibitory and excitatory effects at each unit (and its interaction with the signal type) determines the type of ITD response and that this time course varies from cell to cell.
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  • 23
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    Experimental brain research 68 (1987), S. 525-532 
    ISSN: 1432-1106
    Keywords: Cat ; Visual cortex ; Stroboscopic exposure ; Monocular experience ; Motion deprivation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Monocular deprivation in kittens does not lead to an ocular dominance shift in striate cortex if the visual stimuli do not contain contours. In the present study we sought to find out whether an ocular dominance shift is produced if the visual environment does contain contours but is devoid of motion. Six kittens were reared with one eye occluded in a visual environment that was lit only by the light of a stroboscope (2 flashes per sec). Exposure was started at 5–6 weeks of age after dark-rearing from birth and extended until 8–12 weeks of age for 8 h per day. The rest of the time was spent in total darkness. Thus, the animals were completely deprived of vision in one eye, while the other eye experienced only stationary flashing contours. Single units in area 17 of these animals were studied and compared to normally reared cats. In all six animals ocular dominance was clearly shifted towards the eye with strobe experience. The ocular dominance shift showed, however, the following interdependencies with other parameters: neurones that responded to stationary flashing test stimuli were nearly always dominated by the strobe eye; neurones that responded only to moving bars or edges remained binocular. In the normal control animals the ocular dominance distribution was similar for both groups of cells. Track analysis according to cortical lamination revealed that neurones in infragranular layers consistently showed a weaker OD shift towards the strobe eye than neurones in supragranular layers (including layer 4). Response latencies to stationary flashing stimuli were significantly shorter in the strobe-reared animals than in the normal controls. Orientation tuning was normal in all animals. Directional tuning was reduced after monocular strobe experience, but not by the same amount as described after binocular strobe rearing. The present results demonstrate that monocular visual experience reduced to stationary flashing contours is sufficient to produce on ocular dominance shift in striate cortex. This adds further support to existing notions about the role of nervous activity for changes in cortical connections. Cortical responses to afferent stimulation and the resulting correlated activation of pre- and postsynaptic neurones seem to be a prerequisite for a stabilization of synaptic connections.
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  • 24
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    Experimental brain research 69 (1987), S. 24-42 
    ISSN: 1432-1106
    Keywords: Medial geniculate body ; Tonotopic organization ; Single unit pairs ; Frequency selectivity ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary In the medial geniculate body (MGB) of nitrous oxide anesthetized cats, the pars lateralis (PL) was the only nucleus to show a clear topographic arrangement of its neurons according to their characteristic frequency (CF). When compared to barbiturate anesthetized cats (Imig and Morel 1985a), the tonotopic organization in PL appeared less strict and was characterized by a significant local CF disparity. Furthermore, the degree of tonotopic organization varied along the rostrocaudal axis of the nucleus: it was lower in its caudal than in its rostral half. In the pars ovoidea, the rostral half of the pars magnocellularis (PM) and the suprageniculate nucleus, CF sequences and quantitative evaluations of the tonotopicity indicated the presence of some degree of tonotopic organization which was lower than in PL. No such organization was observed in the caudal part of PM nor in the ventrolateral nucleus, while in the dorsal nucleus, the proportion of toneresponding units was too low for a significant analysis.
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  • 25
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    Pflügers Archiv 408 (1987), S. 451-457 
    ISSN: 1432-2013
    Keywords: O2-Hb affinity ; Bohr effect interaction ; CO2 Bohr effect ; Fixed acid Bohr effect ; Rabbit ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract The action of respiratory and metabolic acid-base disturbances on the O2-Hb affinity was studied in rabbits and cats. Blood samples of both species were exposed to in vitro pH-changes, which were either achieved by variation ofPCO2 (2.8–8.3 kPa) at constant lactic acid concentration, or by addition of lactic acid (5–14 mmol·l−1) at constantPCO2. ThePO2 at halfsaturation (P50) and the Hill'sn were determined from O2-Hb dissociation curves (ODC) in a range between 20 and 80% SO2. Under standard conditions (T=331 K,PCO2=5.33 kPa, pH=7.4), the average P50 value was 4.66±0.05 kPa in rabbits, that is slightly higher than reported by others, and 5.17±0.03 kPa in cats. The average values of Hill'sn were 2.91±0.02 and 2.95±0.03 for rabbits and cats, respectively. When plasma pH was varied by CO2, the resulting classical CO2 Bohr factor φCO2=ΔlgP50/ΔpH50 was distinctly higher in cats (−0.560±0.006,n=25) than in rabbits (−0.504±0.014,n=22), although in the latter species being even higher than reported elsewhere. Concomitant metabolic acidosis did not significantly affect φCO2, but shifted the P50 at a given plasma pH to lower values. Substitution of lactic acid with equimolar amounts of sodium lactate left both φCO2 and P50 unchanged. When plasma pH was varied by lactic acid (LA), the resulting fixed acid Bohr factors φLA were similar for cats (−0.420±0.016,n=21) and rabbits (−0.427±0.010,n=18), and not influenced by additional respiratory acidosis. Concomitant respiratory acidosis, however, shifted the P50 at a given plasma pH to higher values. The deviation of lgP50 from that under standard conditions (lgP50st) induced by both, respiratory and metabolic acid-base changes, can generally be expressed by Eqs. (1) or (2) (1) $$1gP_{50} - 1gP_{50} st = \varphi CO_2 \left( {pH - 7.4} \right) - \left( {\varphi CO_2 - \varphi LA} \right) \cdot \left[ {pH\left( {LA} \right) - 7.4} \right]$$ (2) $$1gP_{50} - 1gP_{50} st = \varphi LA\left( {pH - 7.4} \right) + \left( {\varphi CO_2 - \varphi LA} \right) \cdot \left[ {pH\left( {CO_2 } \right) - 7.4} \right].$$ Thereby, the first term considers the total pH-deviation, irrespective of its origin, and the second term represents the metabolic (1) or the respiratory (2) correction. For practical use and within the physiological range of plasma pH (7.2–7.6), φCO2 and φLA are assumed to be additively linked and to be independent of pH. Once these factors are determined for a given species, together with the buffer capacity for CO2, they provide sufficient data to estimate fairly accurately the position of the ODC. This is particularly important for in vivo conditions where respiratory and metabolic acid-base disturbances often occur simultaneously.
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  • 26
    ISSN: 1432-2013
    Keywords: Sacral visceral afferents ; Pelvic nerve ; Urinary bladder ; Urethra ; Colon ; Anus ; Functional properties ; Cat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract The discharge characteristics of sacral visceral afferents supplying the urinary bladder, urethra, colon and anus to mechanical stimuli were analyzed in the anaesthetized cat. The stimuli used were passive distension (urinary bladder, colon), isovolumetric contraction (urinary bladder), movements of the urethral catheter and mechanical shearing stimuli (mucosal skin of the anal canal). (1) In total 245 afferent units which projected in the pelvic nerve were isolated from the sacral dorsal roots. From one of the following organs, urinary bladder, colon, urethra and anus 117 afferent units were activated. By these stimuli from the bladder, urethra and anus 122 afferent units could not be activated, and as far as tested also not from the colon; in 6 afferent units the classification was unclear. (2) Afferent units from the urinary bladder and the colon responded consistently to passive distension of the respective organ. The units from the urinary bladder showed graded responses at intraluminal pressures of about 10–70 mm Hg and responded also to isovolumetric contractions of the organ. The thresholds of the units from the bladder to passive distension and contraction varied from about 5 to 20 mm Hg intravesical pressure. (3) The afferent units from the urethra and the anus did not react or showed some weak phasic and irregular responses to distension and contraction applied to the urinary bladder or to distension of the colon. They were consistently excited by low threshold mechanical stimulation of the urethra and anus, respectively. (4) The axons from the bladder, urethra and anus were presumably myelinated (conduction velocity above 2 m/s) and conducted at 10.3±6.1 m/s (n=34, mean±SD), 26.3±9.3 m/s (n=13) and 9.5±5.1 m/s (n=37), respectively. The axons from the colon conducted at about 0.5 to 16 m/s (n=20), 13 of them conducting at less than 2 m/s. About 75% of the axons which could not be activated by mechanical stimulation of the visceral organs were presumably unmyelinated (conduction velocity below 2 m/s). (5) Some ongoing activity was found in 9 out of 26 afferent units from the anus but, with one exception, the afferent units from the bladder, urethra and colon were silent. (6) It is concluded that the pelvic afferent units from the urinary bladder, urethra, colon and anus consist of distinct populations with characteristic response patterns. There is no indication from this investigation that the urinary bladder is supplied by sacral afferents which are only recruited at high intravesical pressures during passive distension and isovolumetric contractions and which are possibly associated with pain.
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  • 27
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 31 (1987), S. 1-1 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 28
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    International Journal of Quantum Chemistry 31 (1987), S. 33-44 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The theory of MCSCF and CI energy derivatives with respect to geometrical variations is briefly reviewed with special attention given to the MCSCF and MRCI energy gradients. A computational procedure is proposed for MRCI energy gradients that does not require the solution to any “coupled-perturbed MCSCF” equations, it does not require any expensive direct-CI matrix-vector products involving derivative integrals, and it does not require any derivative integrals to be transformed from the AO basis to the MO basis. An additional feature is that it does not require any changes to existing MCSCF gradient evaluation programs in order to compute MRCI gradients. The only difference in the two cases is the exact nature of the data passed to the gradient evaluation program from the previous steps in the computational procedure. The additional effort required to compute the entire MRCI energy gradient vector is approximately that required for one additional iteration of the MRCI diagonalization procedure and for one additional MCSCF iteration. For large scale MRCI wave functions, the MRCI energy gradient evaluation should only require about 10% of the effort of computing the wave function itself. This computational procedure removes a major computational botleneck of potential energy surface evaluation.
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  • 29
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    International Journal of Quantum Chemistry 31 (1987), S. 65-71 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Preliminary results are presented for transition probabilities in the H + H2 system derived from an adiabatic representation in terms of surface functions on hyperspheres. Special attention is given to the resonance structure for transition probabilities in the first vibrational level.
    Additional Material: 3 Ill.
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  • 30
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    International Journal of Quantum Chemistry 31 (1987), S. 99-112 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Low-lying excitation energies from the ground state of Be were calculated using a basis set of 61 Cartesian Gaussian functions. Three approximations were employed: the time-dependent Hartree-Fock (TDHF), second-order equations-of-motion (EOM), and multiconfigurational time-dependent Hartree-Fock (MCTDHF). The TDHF excitation energies are 0.5-1.1 eV lower than experiment, and the EOM values are 0.3-1.2 eV lower than experiment, whereas the MCTDHF excitation energies deviate on the absolute average from experiment by only 0.03 eV. We found that in an MCTDHF calculation, any proper MCSCF stationary point is a good reference (i.e., initial) state, not just the ground state. Experimental values for oscillator strength are accurately known only for the 2s2X1S → 2s2p1P0 transition. The TDHF value and the MCTDHF value agree with experiment, but the EOM value does not. The agreement of the TDHF value with experiment seems to be coincidental, because for higher lying transitions the TDHF values differ by approximately a factor of two or more from the more accurate MCTDHF. Frequency independent polarizabilities, α(0), were also calculated with the TDHF, HRPA, and MCTDHF and frequency dependent polarizabilities, β(ω), were calculated with the MCTDHF. No experimental data for Be polarizabilities exist, but we expect the MCTDHF values to be among the most accurate calculations available.
    Additional Material: 3 Ill.
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  • 31
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    International Journal of Quantum Chemistry 31 (1987), S. 941-950 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A version of the CNDO/1 method has been outlined that includes dominant relativistic effects. The method utilizes a nonempirical parametrization based on atomic Dirac-Fock calculations. The goal of this QR-CNDO/1 method lies in its applicability to molecules consisting of arbitrary atoms (z = 1-118). Applications to molecular geometries and ionization potentials for 50 molecules are presented.
    Additional Material: 2 Ill.
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  • 32
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 33
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    International Journal of Quantum Chemistry 32 (1987), S. 13-18 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: According to the formulas obtained in the preceding paper, it may be used for all types of the hybridization with any set of azimuthal quantum numbers l, l = 0 through l = 5, and a complete theoretical data of bond angles and bond strengths are shown in this paper.
    Additional Material: 2 Tab.
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  • 34
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    International Journal of Quantum Chemistry 32 (1987), S. 71-86 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the unitary-group formulation of quantum chemistry, the spin-projected, configuration-state spaces of quantum chemistry are realized by the irreducible representation spaces (IRS) of the freeon unitary group U(n), where n is the number of freeon orbitals. The Pauli-allowed IRS are labeled by the partitions [λ] = [2(N/2)-s, 12S], where N and S are the particle number and the spin, respectively. The generator-state approach (GSA) to the unitary-group formulation consists of (1) the construction of the overcomplete, nonorthonormal generator basis for each IRS; (2) the Lie-algebraic computation of matrix elements over generator states; (3) the Moshinsky-Nagel construction of the complete, orthonormal Gel'fand basis in terms of the generator basis; and (4) the computation of matrix elements over Gel'fand states in terms of matrix elements over generator states.
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  • 35
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 36
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    International Journal of Quantum Chemistry 32 (1987), S. 181-191 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It has been shown that an easier procedure to the study of molecular electrostatic potentials than the prevalent monopole isopotential approach is to use a dipole as the mapping device: allow the dipole to move on a geometrical surface enclosing the molecule such that the distance between the surface and the nearest atoms of the molecule (closest distance of approach) is fixed, say at 2 Å, calculate the electrostatic interaction energy between the molecule and the dipole at different points of the surface, and let the dipole orient itself along the minimum energy direction and treat these minimum energies as the desired electrostatic potentials. Thus the favorable binding sites of a given molecule for other species along with their relative orientations can be obtained. This procedure has been applied to the nucleic acid bases using the necessary input data from two independent sources. Thus success of the procedure in predicting important features of molecular electrostatic potentials has been demonstrated.
    Additional Material: 4 Ill.
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  • 37
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A systematic examination of the components of the interaction energy, obtained with the Kitaura and Morokuma method, for nine H-bonded dimers without and with counterpoise corrections (CP) is presented. The nine dimers Hn A … HBHm correspond to all the possible combinations of HF, H2O, and NH3 as electron donors and electron acceptors. The interaction energy and the corresponding components have been computed over a sizable interval of intermolecular distances with five basis sets (STO-3G, MINI-1, 3-21G, 4-31G, 6-31G**) selected among those most extensively used to study interactions in larger systems. The CP corrections to the ΔE components have been obtained with a method, implemented in our group, which permits assignment to the pertinent components of ΔE of a physically reasonable portion of the CP correction even though different CP corrections are adopted. We examine here three versions of the CP correction, namely, the full CP correction (i.e., the original version of Boys and Bernardi) and CP corrections limited to the virtual space of the partner or to the electron donor only. The resulting data are employed to assess the basis set dependence of several models of hydrogen bonding (the electrostatic model, the semiclassical model, etc.) both with and without CP corrections.
    Additional Material: 9 Ill.
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  • 38
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A detailed analysis of the ΔE(R) curves for nine hydrogen bonded dimers involving HF, H2O, and NH3 as partners, computed with five basis sets (STO-3G, MINI-1, 3-21G, 4-31G, and 6-31G**) and subjected to counterpoise (CP) corrections with three different methods is reported. Using several criteria and tests, the positive effect of full CP corrections for the description obtained with all the basis sets (with the exception of the STO-3G one) is pointed out. The CP correction at the 6-31G** levels is still sizable and improves the results with respect to the estimated Hartree-Fock limits of ΔE(Req) and Req. The results obtained with the application of the full CP correction to the MINI-I energies are of relatively good quality. The STO-3G energies at the SCF level are, on the contrary, overcorrected by the full CP correction and slightly improved by “limited” CP corrections: this basis set, however, is not recommended for calculations of geometries and stabilization energies of H-bonded dimers of this size.
    Additional Material: 7 Ill.
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  • 39
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    International Journal of Quantum Chemistry 32 (1987), S. 295-312 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An accurate analytical electron density for the beryllium atom is obtained by using a fast and systematic method recently developed and tested for the neon atom. Asymptotic conditions both at the nucleus and at large distances are obeyed. A point-by-point comparison between our density and the one obtained from an almost “exact” configuration interaction wave function shows that differences are less than 0.5% for r between 0 and 5 bohrs and less than 1 % up to 9 bohrs. The accuracy of the density is also assessed by comparing results of density moments and x-ray scattering factors.
    Additional Material: 2 Ill.
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  • 40
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987), S. 361-375 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We discuss a procedure for calculating numerical Hartree-Fock orbitals that can be applied to polyatomic systems. This approach is formulated in momentum space to avoid Coulomb singularities and uses fast Fourier transforms to solve integral convolutions. Results for a number of simple systems are presented.
    Additional Material: 5 Tab.
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  • 41
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    International Journal of Quantum Chemistry 31 (1987), S. 405-415 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Binding of Zn2+ to imidazole (Im) and methyl imidazole (MeIm) is studied by ab initio methods as a model for the effect of cation binding on tautomeric energies. Gradient energy optimized conformations were obtained for all neutral and ionic structures, including the deprotonated molecules and the ylides. The N3—H tautomer of MeIm is calculated to be more stable than N1—H by about 1 kcal/mole. However, binding of a Zn2+ cation to the available nitrogen site is found to reverse the order of binding, leaving N1—H more stable by 1 kcal/mole. Binding of Zn2+ produces a significant perturbation in the electronic structure, a smaller shift in the equilibrium conformation of the imidazole ring, and only a small absolute shift in the relative tautomer energies. Methyl substitution at C5 has a small effect on both conformation and energetics.A high-energy ylide tautomer is produced by moving the proton bound to C2 to the N1 atom. The binding of Zn2+ to the C2 site is substantially stronger than to the N1 site, yielding nearly isoenergetic ZnIm2+ conformations for binding to either N or C atoms. For the deprotonated salts the lowest energy conformation has the C2—N3 bond bridged by Zn2+.
    Additional Material: 7 Tab.
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  • 42
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    International Journal of Quantum Chemistry 31 (1987), S. 425-427 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is made clear that two different statements in the literature concerning energy derivatives are completely compatible by deriving them as two different interpretations of the same equation. Some other aspects of these results are also discussed.
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  • 43
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    International Journal of Quantum Chemistry 31 (1987), S. 435-443 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Accurate methods for computing energies and electronic properties of atoms and molecules have been derived from direct treatment of localized pairs of electrons. The conceptual development and implementation of such methods is reviewed.
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  • 44
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    International Journal of Quantum Chemistry 32 (1987), S. 473-489 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The rigorous derivation of the energy density functional is proposed within the framework of the spinfree, or spin-restricted formulation of the energy density functional theory. It is shown particularly that the kinetic energy density functional is given by a sum of the Weizsacker term and the so-called “modified” Thomas-Fermi one. The variational principle is formulated for the energy density functional theory in terms of the Euler-Lagrange equation, and the virial theorem is proposed.
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  • 45
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    International Journal of Quantum Chemistry 32 (1987), S. 591-594 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The time-dependent Schrouml;dinger equation for the oscillator H = α(t)p2 + β(t)x2 + γ(t)x is exactly solved. The time evolution operator is easily obtained by means of an operator algebra and the quantum-mechanical equations of motion. The problem is reduced to solving the classical equations of motion. The method is shown to apply to multidimensional oscillators.
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  • 46
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    International Journal of Quantum Chemistry 31 (1987), S. 445-453 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A modified Bohr orbit procedure is used to calculate the energies for the 1S ground state and the 2P, 3D, and 4F excited states of the helium atom. The energies are calculated from \documentclass{article}\pagestyle{empty}\begin{document}$ {{\int\limits_0^\pi {E\left(\Phi \right)P\left(\Phi \right)d\Phi } } \mathord{\left/ {\vphantom {{\int\limits_0^\pi {E\left(\Phi \right)P\left(\Phi \right)d\Phi }} {\int\limits_0^\pi {P\left(\Phi \right)d\Phi } }}} \right. \kern-\nulldelimiterspace} {\int\limits_0^\pi {P\left(\Phi \right)d\Phi } }} $\end{document}, in which E(φ) is the Bohr orbit energy for angle φ between the position vectors \documentclass{article}\pagestyle{empty}\begin{document}$ \vec r_1 $\end{document} r1 and \documentclass{article}\pagestyle{empty}\begin{document}$ \vec r_2 $\end{document} r2, and P(φ) is a probability function for this angle. Numerical procedures are used to evaluate the integrals. Energies that range between -2.9082 and -2.9054 au are calculated for the 1S state (cf. -2.9037 au, exact). The Bohr energies for the excited states are -2.1318, -2.1240, -2.0562, -2.0555, -2.0314, and -2.0312 au, which are generally close to the exact energies of -2.1332, -2.1239, -2.0557, -2.0557, -2.0313, and -2.0313 au for the 23P, 21P, 33D, 31D, 43F and 41F states. Some relationships that exist between the Bohr theory and the Schrödinger local energies are discussed. Approximate Bohr orbit estimates for the energies of the 2P states of He, Li+,…,Ne8+ are reported.The invariance of the two-electron Bohr hamiltonian with respect to the interchange of the electron coordinates leads to two classical probability functions when the orbit quantum numbers for the two electrons differ.
    Additional Material: 4 Tab.
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  • 47
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    International Journal of Quantum Chemistry 31 (1987), S. 463-470 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Valence-bond calculations are reported for the isoelectronic series of molecules and ions: N2, CO, BF, NO+ and CN-. The most important structures are N≡N, C=O, Bπ—F, N+=O and C=N. Hybridization of the 2s and 2p orbitals is important. Only two or three structures are required to obtain an energy lower than that obtained with the molecular orbital approximation. Structures in which the electronegative element loses a σ-orbital or gains a π-orbital are favored. π-bonds tend to be favored over σ-bonds. The bond in NO+ resembles that in CO, whereas that in CN- resembles the bonding in N2.
    Additional Material: 5 Tab.
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  • 48
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    International Journal of Quantum Chemistry 31 (1987), S. 471-487 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio SCF, CI, CEPA, and MCSCF techniques are compared and contrasted in a theoretical study of the 1s core ionized Li2 molecule from the point of view of core hole localization. In agreement with earlier studies of symmetric core ionized molecules, SCF theory is found to give a physically reasonable description of core ionization only when symmetry breaking is allowed. This results in a dramatic lowering of the energy of the core ionized state and hence of the ionization potential. By extension, CI wave functions that are developed in terms of a broken symmetry SCF reference plus its single and double excitations are found to perform significantly better than those constructed from symmetry adapted SCF orbitals. Alternatively, if the full point group symmetry is to be retained, a multiconfigurational treatment is called for and, in agreement with the conclusions of an analogous study on O2 [H. Ågren, P.S. Bagus, and B.O. Roos, Chem. Phys. Letters 82, 505(1981)], it is found that a modestly sized MCSCF wave function is capable of accounting for the energetic effects of symmetry breaking. Potential energy curves for Li2 and several states of core ionized Li2 have been calculated, allowing predictions of the adiabatic ionization potential and vibrational, satellite, and Auger structures in the photoelectron spectrum of Li2 to be made.
    Additional Material: 4 Ill.
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  • 49
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    International Journal of Quantum Chemistry 31 (1987), S. 489-505 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A practical algorithm is described for generating a set of symmetry- and spin-adapted antisymmetrized products of molecular orbitals (SAAPs) which form an orthogonal basis for a full active configuration space. The spin-adaptation is completely general. The space-symmetry adaptation is accomplished for the groups C∞v and D∞v.
    Additional Material: 4 Tab.
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  • 50
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    International Journal of Quantum Chemistry 32 (1987), S. 685-697 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A complete description of the rotational isomerism of monothioformic acid is presented. Ab initio results concerning the barrier heights and the energy difference between the stable isomers are in good agreement with the experimental data. A reduced potential function deduced from our calculations has been used to characterize the kinetics and thermodynamics of the rotational isomerization. The reported ab initio values of equilibrium constants are in good agreement with the experimental ones. From the analysis of the available experimental data, we have found that the free energy and enthalpy behavior are quite similar and that no noticeable entropy contributions are involved in the internal rotation, in agreement with previous studies on unimolecular isomerization processes.
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  • 51
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    International Journal of Quantum Chemistry 32 (1987), S. 723-723 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 52
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    International Journal of Quantum Chemistry 32 (1987), S. 1-1 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 53
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    International Journal of Quantum Chemistry 32 (1987), S. 85-103 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The equilibrium geometry, stabilization energy, and electric polarizability of formic acid, formamide, and the three possible cyclic hydrogen-bonded pairs are obtained by ab initio calculations using the STO-3G, 4-31G, and 6-31G** bases. These three properties are found to be very much dependent on the basis set extension. The polarizability of the dimers is found to be basically additive in contribution from the monomeric moieties.
    Additional Material: 5 Ill.
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  • 54
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    International Journal of Quantum Chemistry 32 (1987), S. 133-147 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the course of conformational motions of molecules the changes in shapes of electronic charge distributions follow that of the nuclear framework. However, this coupling between the changes in the nuclear geometry and electron density may depend on the actual nuclear displacement; the coupling may be weak or strong for a given conformational motion. It is of some interest to analyze how faithfully the charge density variations follow the nuclear displacements in a family of conformational rearrangements. In certain cases small conformational changes may induce large changes in the shape of charge density distributions, while in other cases large and qualitatively important conformational changes may involve qualitatively inessential distortions in the shape of electron distributions. In this article we describe a new classification of conformations based on those domains of nuclear configuration space within which the „shape groups“ (symmetry independent homology groups) of the electric charge density remain invariant. Such an analysis might be valuable when seeking correlations between molecular structure and certain biological or biochemical activities.
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  • 55
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    International Journal of Quantum Chemistry 32 (1987), S. 211-219 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Practical aspects of the calculation of the proton transfer process in a model of the active site of the thiol protease papain are explored with basis sets of different sizes. Results from ab initio calculations with the STO-3G, 4-31G, 6-31G, 6-31G* basis set, and a 6-31G basis set augmented with polarization functions on the sulfur atom are compared for their performance in describing the proton transfer energy. The nature of the convergence of the calculated properties of the potential curve for proton transfer with the increase in basis set indicates the need for a split-valence basis set and for polarization functions on the sulfur in order to achieve an appropriate description of this system. Correlation corrections to the calculated energies are shown to contribute significantly to the characteristics of the proton transfer energy curve.
    Additional Material: 4 Ill.
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  • 56
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    International Journal of Quantum Chemistry 32 (1987), S. 281-288 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The scope of multistep modeling (MSM) is expanded by adding a least-squares minimization step in the procedure to fit backbone reconstruction consistent with a set of C-alpha coordinates. The analytical solution of Phi and Psi angles, that fits a C-alpha x-ray coordinate [1] is used for tyr-tRNA synthetase. Phi and Psi angles for the region where the above mentioned method fails, are obtained by minimizing the difference in C-alpha distances between the computed model and the crystal structure in a least-squares sense. We present a stepwise application of this part of MSM to the determination of the complete backbone geometry of the 321 N terminal residues of tyrosine tRNA synthetase to a root mean square deviation of 0.47 Å from the crystallographic C-alpha coordinates.
    Additional Material: 7 Ill.
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  • 57
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    International Journal of Quantum Chemistry 32 (1987), S. 325-330 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have examined an application of the weighted identification number in the QSAR study of the toxicity of aliphatic ethers on mice. The results obtained are superior to those achieved by the connectivity index.
    Additional Material: 3 Tab.
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  • 58
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    International Journal of Quantum Chemistry 32 (1987) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 59
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    International Journal of Quantum Chemistry 32 (1987), S. 13-14 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 60
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    International Journal of Quantum Chemistry 32 (1987), S. 89-97 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio self-consistent-field electronic state calculations have been carried out for an interstitial-iron-substitutional-boron impurity pair complex in silicon. The calculations do not provide support for the currently accepted microscopic ionic model for the pair. Rather, we have shown that the covalent effects play a basic role in determining the physical properties of the complex.
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  • 61
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    International Journal of Quantum Chemistry 32 (1987), S. 115-129 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: By analyzing the convergence properties of the lattice sums in the exchange part of the restricted Hartree-Fock orbital energy, we isolate the source of the nonanalytic behavior of a partially occupied band at the Fermi energy. This analysis shows how an extended system behaves qualitatively differently from a finite system but also provides a possibility of following the development of nonanalyticity as the size of the system grows.
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  • 62
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    International Journal of Quantum Chemistry 32 (1987), S. 163-170 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The aromatic (A) and quinoid (Q) forms of polythiophene (PT) have entirely different energy gaps: ∼0.5 eV for the quinoid form and ∼2 eV for the aromatic form, respectively. The energy gaps and stability of derivatives of PT are studied by total MNDO geometry optimization using energy band theory for the total energy calculations followed by a Hückel energy band calculations to approximate the energy band structure. Addition of fused rings to PT reverses the order of stability of the aromatic and quinoid isomers and the ordering in the size of the energy gaps. Small energy gap polymers are suggested on the basis of the calculations.
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  • 63
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    International Journal of Quantum Chemistry 32 (1987), S. 191-198 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Chemical reactions and conformational changes of N-atom systems can be described as displacements in a (3N-6)-dimensional metric configuration space M provided with a global metric. Although space M has a metric, it is not in general a vector space; it is a topological space. In contrast to the commonly used internal configuration spaces based on bond length/bond angle internal coordinates, and having no global metrics, within space M each internal configuration of the nuclei of the molecule corresponds to one and only one point of the space. This property of M is advantageous when analyzing chemical reactions. The global metric of M ensures that differences between any two internal configurations can be interpreted as a distance in this space that allows one to provide M with coordinate systems by turning M into a manifold with boundary. Certain formal reaction paths show some counterintuitive behavior within this space: they may undergo a formal reflection at some points of M. A condition, the tangent criterion, is used for the diagnosis of such reaction paths and for the determination of special nuclear configurations where such reflections occur.
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  • 64
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    International Journal of Quantum Chemistry 31 (1987), S. 649-662 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Energies and geometries for a number of small hydrogen bonded dimers have been calculated by semiempirical method based on a perturbation approach. Results have been compared with experimental and the best theoretical data. A quite good description of equilibrium configurations has been obtained in every case when local multipoles from sufficiently accurate wave functions have been used. Hydrogen bond lengths have not been predicted with sufficient precision. Results indicate, however, that it should be possible to achieve improvement in the framework of the applied calculation scheme by modification of the parameter values.
    Additional Material: 4 Ill.
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  • 65
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    International Journal of Quantum Chemistry 32 (1987), S. 283-295 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We examine the photoaddition of hydroxylazoaromatic compounds and related thione analogs with olefins. By examining the properties of the lowest lying singlet and triplet states, we conclude that the product distribution is best described by the unpaired spin density of the triplet state. This suggests that absorption of light by the aromatic is followed by conversion into the triplet, and this triplet is the active precursor. Since unrestricted molecular orbital calculations are easily performed on the lowest triplet of these aromatics, prediction of possible products is straightforward.
    Additional Material: 7 Ill.
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  • 66
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    International Journal of Quantum Chemistry 32 (1987), S. 267-282 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Hydrogen addition to acetylene has been studied by molecular orbital methods with the unrestricted Hartree-Fock (HF)approach and with Møller-Plesset (MP) perturbation theory up to fourth order using the 6-31G*, 6-31G**, and 6-311G** basis sets. For each basis set a number of points along an approximate reaction path were calculated by fixing the attacking H—C distance and optimizing all of the remaining parameters. At these geometries, single point MP4 calculations with and without spin projection were carried out, yielding the position, height, and shape of the addition barrier at the various levels of calculation with each of the three basis sets. The results of this approach were confirmed by a grid search of the region near the transition state using the 6-31G* basis set. The unprojected MP2, MP3, and MP4 barriers are too narrow and are 10-20 kcal/mol too high. With spin projection, the barriers are much lower and broader. At the PMP4SDTQ/6-311G** level, with zero point energy calculated at UHF/6-31G*, the vibrationally adiabatic barrier at 0 K is 4.0 kcal/mol, and the attacking H—C distance is 2.0 Å.
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  • 67
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    International Journal of Quantum Chemistry 32 (1987), S. 313-319 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We explore the implications of static disorder on electron transfer (ET) in a microscopically inhomogeneous polar medium, where the environment of each solute is characterized by a single dielectric relaxation time, τ, with the distribution function of τ being related to the complex dielectric susceptibility. For the interesting situation of solvent-controlled ET, the decay of the population probability is nonexponential, which can be expressed in terms of a cumulant expansion. The microscopic decay function can be related to the macroscopic step-response function of the dielectric medium.
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    International Journal of Quantum Chemistry 32 (1987), S. 355-362 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A self-consistent model capable of describing the interaction of a metal electrode/liquid electrolyte interface is presented. As in a real system, a capacity maximum shifted towards positive charges is obtained from the model. The metal is represented by the planar uniform background model (jellium). The solvent is described by a polar liquid whose response to charge is accounted for in terms of the local approximation. The interaction between the metal and ions is modelled by a charged plane placed near the metal surface. Charge neutrality of the whole system is preserved. The present model is a good approximation for highly concentrated solutions.
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  • 69
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    International Journal of Quantum Chemistry 31 (1987), S. 733-737 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper we outline briefly how microlocal analysis can be applied to give a general approach to the mathematical theory of resonances in the semiclassical limit. We also describe recent results about the asymptotic behavior of resonances generated by closed trajectories and stationary points in the classical flow.
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    International Journal of Quantum Chemistry 31 (1987), S. 739-746 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper we make explicit constructions of a family Aθ of intertwining operators between the Schrödinger operator Hv = -Δ + v(x) and H0 = -Δ. The wave operators and the scattering matrix are expressed in terms of the Aθ, and some methods of inverse scattering are described.
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  • 71
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    International Journal of Quantum Chemistry 31 (1987), S. 707-731 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Examples from music and nuclear, as well as atomic and molecular, physics are given to introduce and illustrate the resonance concept. Some fundamental concepts of scattering theory such as the differential and the total cross section are presented. The concept of the collision complex is illustrated with a light particle scattering reaction in nuclear physics. The concept of channels is introduced, and this formalism (which is so far empirical in nature) is dressed in the language of quantum mechanics. Finally I show that our descriptions of phenomena in nuclear physics can also be used in atomic and molecular physics.
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  • 72
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The analytic energy gradient method that we have recently implemented for CCSD wave functions is applied to fully optimize the pyramidal C3v and planar D3h structures of ammonia. Using a double-zeta plus polarization basis set, results for harmonic vibrational frequencies, infrared intensities, and dipole moments have been obtained. Comparison with different levels of truncated configuration interaction suggests that CCSD values are of better than CISD quality and generally closer to CISDTQ results.
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  • 73
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    International Journal of Quantum Chemistry 32 (1987), S. 539-545 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Effective core potentials are utilized in conjunction with polarization propagator calculations of excited state properties. The propagator method employed is based on an antisymmetrized geminal power wave function as the reference state. Calculations are presented on the low-lying excited states of HF and NaH. All-electron and valence-electron results are compared for HF. The choice of basis set is found to be very important for obtaining good results.
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  • 74
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    International Journal of Quantum Chemistry 32 (1987), S. 569-572 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nonadiabatic energy correction term of the hydrogen molecule at large separation is discussed to determine whether or not the nuclear motion induces the inter-atomic interaction potential. Nonadiabatic vibrational motion of nuclei induces the internal charge polarization of atoms to give the novel correction term to the London R-6 force. The correction term is (4/M) (1/R3), which is important at large R despite the overwhelming magnitude of nuclear mass.
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  • 75
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    International Journal of Quantum Chemistry 31 (1987), S. 755-794 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: As an extension of the recent atomic work of Krylstedt et al. [1, 2], we propose the synthesis of the static exchange plus polarization model within the multiple scattering Xα formalism and the exterior complex rotation method for the study of shape resonances occurring in molecular collisional systems. The bound state multiple scattering Xα method is reviewed with special attention to the form of the various wave functions for the different molecular regions. In connection with the inclusion of continuum electron exchange into the scattering model, we analyze a possible solution to the problem of asymptotical behavior caused by the local density-based free electron gas approximation used in this case. We also propose a method to fix the cutoff parameter, inherent in the polarization potential, for symmetry-related molecular participants in the scattering process, thereby obtaining a possible predictive power for the one-parameter scattering model.Titchmarsh-Weyl's theory is used to formally connect the above formulation to scattering theory. The theoretical difficulties in obtaining a unique meromorphic continuation of the S matrix are investigated in connection with the requirements on the actual potential to be exterior dilation analytic. Furthermore, the occurrence of asymptotic quantum numbers is noted and discussed in conjunction with muffin tin-like approximations and related exterior complex rotated schemes.It is found that the electron exchange part of the nonstatic one-body potential exhibits a functional form that is not exterior dilation analytic, albeit the general electron and nuclear many-body problem involving Coulomb forces are dilation analytic. Although the immediate consequences indicate a rotation angle (θ) dependence on the S matrix continuation, a uniquely defined assignment of the cutoff parameter r0 = r0(θ) makes the present nonstatic model “exterior dilation analytic” in the sense that it mimics the dilation analytic structure of the full many-body problem at the same time obeying “asymptotic” spherical symmetry via the associated constant of evolution. However, in the static exchange approximation the above difficulties are shown to be circumvented via a certain reformulation, leading to a regular analytic asymptotic form for the interaction potential.
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  • 76
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    International Journal of Quantum Chemistry 31 (1987) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 77
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    International Journal of Quantum Chemistry 31 (1987), S. 841-845 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the present article we show how the bound states of the Coulomb potential may be associated with resonances that occur when this potential is perturbed by a barrier potential. The main idea is to trace the bound states on successive switching on of the barrier perturbation. It is found that those bound states that are localized inside the barrier are highly sensitive to variation with respect to the barrier height, whereas those that are localized outside are less sensitive. However, there are certain intervals for the barrier height when the role of being “a state localized inside the barrier” is shifted from one bound state to another. The result can be pictured as a “relay race,” where the “deliveries of the baton” are carried out over corresponding avoided crossings. The baton is ultimately handed over to a shape-type resonance state.
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  • 78
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    International Journal of Quantum Chemistry 31 (1987), S. 847-853 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Methyl substitutents located peri to bay-region benzo rings of polycyclic aromatic hydrocarbons generally reduce or eliminate carcinogenic activity, most likely because such substituents force the hydroxyl groups of dihydrodiol intermediates to adopt preferentially pseudodiaxial, rather than pseudodiequatorial, conformations. Empirical force field calculations have been employed to examine the influences of peri and other positional substituents on hydroxyl conformation, taking naphthalene, anthracene, and phenanthrene as model compounds. For the unsubstituted naphthalene and anthracene dihydrodiols, the pseudodiequatorial conformation is preferred. This preference is reduced by adjacent methyl substitution and reversed by peri methyl substitution. Because of steric crowding the phenanthrene bay-region dihydrodiol preferentially adopts a pseudodiaxial conformation. The results are discussed in relation to recent experimental evidence.
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  • 79
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    International Journal of Quantum Chemistry 31 (1987), S. 855-869 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electronic absorption spectra of some phenylethylamine drugs, namely, d-pseudoepherine, l-pseudoephedrine, l-ephedrine, dl-ephedrine dl-norephedrine, phenylethylamine, methoxyphenamine, and l-noradrenaline were investigated in polar and nonpolar solvents. The observed transitions were interpreted, and the role of σ-π interaction was explored. Molecular orbital calculations were performed on representatives of the above group of compounds, namely, d-pseudoephedrine, l-ephedrine, and l-noradrenaline using the INDO procedures and adopting the best conformer of the molecule. The transition energy, band intensity, and dipole moments were calculated and corresponded satisfactorily with the experimental values.
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  • 80
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    International Journal of Quantum Chemistry 31 (1987), S. 893-901 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The analytic expressions of the integral prototypes involving both Slater and s-type Gaussian functions, explicity derived in Ref. 1, are generalized to the case of higher order modified Gaussian functions [2].
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  • 81
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: By expanding the wave function of a system of N particles in terms of products of functions of one and (N-1) particles, the one-particle, nonlocal operator F̂EKT (extended Koopmans' theorem) is determined. It is shown that although this operator is nonhermitian, its eigenvalues and eigenfunctions represent the ionization energies and occupied orbitals, respectively. The eigenfunctions of F̂EKT are the one-particle functions that enter into the expansion of the wave function of the system as partners of the (N-1)-particle wave functions. The eingenvalues are also one-particle energies that, multipled by the orbital occupancy probalities, enter the expression for the total N-particle energy of the system.
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  • 82
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    International Journal of Quantum Chemistry 31 (1987), S. 927-939 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We apply completely transferable, strictly localized molecular orbitals for the calculation of molecular electrostatic fields. This approach, derived from our previous bond fragment method for the calculation of molecular electrostatic potentials, reduces computational efforts drastically. The fields around small molecules containing first- and second-row atoms are systematically overestimated as compared with ab initio calculations with a minimal STO-3G basis set. However, deviations can be corrected by a simple multiplicative factor, which means that the overall shape of the potential and field around the molecule is correctly reproduced. Our approximate field can be used to determine possible hydration sites around molecules as proposed earlier by Peinel and coworkers. Application of the method is illustrated on the formamide molecule.
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  • 83
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    International Journal of Quantum Chemistry 32 (1987), S. 399-399 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 84
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    International Journal of Quantum Chemistry 32 (1987), S. 403-403 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 85
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    International Journal of Quantum Chemistry 32 (1987), S. 427-434 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The quality measure δ of Sordo and Pueyo is computed for 94 orbital basis sets for the atomic helium Hartree-Fock problem and compared with various information theoretic quality measures reported previously by us for this data base. δ is in error often enough that it is unlikely to be a useful general purpose measure.
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  • 86
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    International Journal of Quantum Chemistry 32 (1987), S. 457-466 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Sturmian transformation is reviewed and some of its properties are discussed, in particular, its use in perturbative approaches, its connection with variational schemes, and its use for the study of resonances. One potential problem (Doolen) having no bound states is described exactly.
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  • 87
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    International Journal of Quantum Chemistry 32 (1987), S. 27-35 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Basis set and correlation effects on computed hydrogen bond energies of the negative ion complexes AHn · AHn-1-1, for AHn = NH3, OH2, and FH, have been evaluated. The addition of diffuse functions on nonhydrogen atoms to valence double- and triple-split plus polarization basis sets [6-31G(d, p) and 6-311G(d, p)] significantly decreases binding energies by 9-19 kcal/mol, depending on the particular complex and the level of theory. Adding diffuse functions to hydrogens has a negligible effect, while replacing the single set of polarization functions on each atom by two sets alters energies by 1 kcal/mol or less. Electron correlation increases the hydrogen bond energies of these complexes and has a greater effect for basis sets without diffuse functions. Since the Hartee-Fock energies computed with these basis sets are already too large, correlation energy calculations should not be performed in these cases. For basis sets including diffuse functions, the correlation energy contribution to the binding energies of these complexes is significant, with the Møller-Plesset second-order term being the largest term and having a stabilizing effect of from 3-6 kcal/mol. The third and fourth order terms are smaller, and may be of opposite sign. As a result, the MP2 and MP4 energies differ by no more than 1 kcal/mol, with the MP2 stabilization energy being greater except for N2H5-1. The computed standard solvation enthalpy of OH-1 by H2O based on either MP4/6-311 + G(2d, 2p) or MP2/6-31 + G(d, p) electronic energies is -26.8 kcal/mol, in excellent agreement with a recent gas-phase experimental measurement.
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  • 88
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    International Journal of Quantum Chemistry 32 (1987), S. 105-110 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new definition of molecular similarity in terms of electron density is proposed and a method for calculating similarity based on molecular electrostatic potential and molecular electric field introduced. It is applied to some simple isosteres.
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  • 89
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    International Journal of Quantum Chemistry 32 (1987), S. 127-132 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Most of the important conformations of biomolecules possess only trivial symmetry. Consequently, symmetry groups have no roles in the characterization of the shapes of such conformations. However, an alternative group theoretical model, based on homology groups of algebraic topology, provides a detailed description of shapes for all conformations. These shape groups are useful for precise comparison of molecular shapes and are proposed as a computational tool for QSAR. A new computational method for the determination of various shape groups is described which is suitable for the simultaneous analysis of a pair or a family of molecular properties. In this note a general method is described and applied to the shape of electronic charge distribution along van der Waals surfaces.
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  • 90
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    International Journal of Quantum Chemistry 32 (1987), S. 189-209 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Studies on the proton transfers in water clusters (H2O)n (n = 2, 3, 4, 5, 6), and in DNA base pairs, adenine-thymine base pair, and guanine-cytosine base pair, have been done by using the potential functions of polarization model for water and ab initio SCF method with STO-3G basis set for base pairs, respectively.
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  • 91
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    International Journal of Quantum Chemistry 32 (1987), S. 261-280 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Briefly noting earlier studies on the polypentapeptide of elastin, (Val1-Pro2-Gly3-Val4-Gly5)n, and on elastin, it is emphasized that entropic elastomeric force can be exhibited by nonrandom, anisotropic polypeptide systems and therefore that entropic elastomeric force does not necessarily result from isotropic random chain networks as required by the classical theory of rubber elasticity, nor does it result from solvent entropy effects as deduced from the slow loss of elastomeric force on thermal denaturation. Instead entropic protein elasticity can be the result of internal chain dynamics, specifically of librational processes that become damped on chain extension. This new mechanism of entropic protein elasticity allows for an understanding not only of elastin but also of the passive tension of striated muscle, of the voltage-dependent interconversion between open and closed conductance states in the sodium channel of squid nerve, and of protein elastic forces producing strain in a substrate bond during enzyme catalysis. Because entropic elastomeric force develops as a result of an inverse temperature transition, it becomes possible to shift the temperature of the transition to higher or lower temperatures by decreasing or increasing, respectively, the hydrophobicity of the elastomeric polypeptide chain. In warm-blooded animals this allows for biochemical modulation of the relaxation or development of entropic elastomeric force by an enzymatically modulated decrease or increase of the hydrophobicity, as for example, by phosphorylation or dephosphorylation of the elastomeric polypeptide chain. This understanding provides a mechanism for modulating protein function, whether for example enzymatic or channel, a mechanism for the remarkable reversible structural processes that attend parturition, and a mechanism for the connective tissue anomalies of wound repair and enviromentally induced lung disease.
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  • 92
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    International Journal of Quantum Chemistry 32 (1987), S. 297-315 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have recently discovered a new entirely unexpected, and highly selective protein - ligand interaction. This new kind of molecular interaction was recognized by chromatography of proteins on divinylsulfonated agarose gels which had been deactivated using mercaptoethanol. The essential structure of the interacting immobilized ligand is quite simple and nonionic. It can be generally represented by: \documentclass{article}\pagestyle{empty}\begin{document}$$\hbox{agarose-O-CH}_2 \hbox{CH}_2\hbox{-SO}_2\hbox{-CH}_2\hbox{-X-}$$\end{document} where X was first a thioether but can also be N, O(S 〉 N ≫ O) or possibly any atom with at least one lone electron pair. We have provisionally termed peptides and proteins interacting with this ligand „thiophilic,“ in recognition of their affinity for the definitive thioether sulfone constituents. The thiophilic adsorption process is promoted by water-structuring or „antichaotropic“ salts such as sulfates or phosphates and would appear to be entropically driven. The thermodynamics of such a process are discussed relative to protein recognition of the immobilized thioether-sulfone ligand. We do not yet know the precise mechanism for the interaction but we believe that salt allows the protein into close contact with the immobilized thioether-sulfone group where short-range forces are likely to be important. Evidence suggests that aromatic side chains on the protein-binding site may be involved and we therefore expect that some kind of electron-donor-acceptor or proton-acceptor mechanism is likely involved. Two important applications of thiophilic adsorption are the selective immobilization of functional antibodies as well as purification of immunoglobulins from serem, ascites fluid, and hybridoma cell culture media. Monoclonal antibodies can be purified in one step under extremely mild (structure-stabilizing) conditions. We therefore consider the further characterization of thiophilic adsorption of major significance in the fields of immunology and biotechnology and hope that this presentation will inspire attempts to explain the interaction in terms of quantum chemistry.
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    International Journal of Quantum Chemistry 32 (1987), S. 347-349 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 94
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    International Journal of Quantum Chemistry 32 (1987), S. 15-29 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An attempt is made to analyze the present state of first-principles methods used in solid state theory to elucidate where these methods derive their strength and why they may be expected to gain even more predictive power in the near future. The latter will depend on the success of recently contemplated improvements. As regards the ground state properties of solids, there are two - in principle -  rigorous ways of treating the associated N-electron problem. One is based on the Hohenberg-KohnSham (HKS) theory, which maps the electronic pair correlation onto a strictly local, energy-independent potential that occurs in the associated one-particle equations. The alternative approach, which will not be discussed in this paper, is connected with determining quasi-particle amplitudes from the Dyson equation, where the information on the electronic pair correlation is absorbed into a nonlocal energy-dependent self-energy operator.Distinctly different from HKS theory, which only applies to ground states, the quasi-particle scheme lends itself to describe excitations (e.g., interband transitions) just as well. We shall furthermore discuss a generalization of the HKS theory that explains why naive extensions of this approach to excited states have been relatively successful in a variety of cases.
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    International Journal of Quantum Chemistry 31 (1987), S. 73-80 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A band intensity alternation has been observed in the absorption spectra to the à 1A2″ state of NH3 and ND3 cooled in supersonic expansions. The nuclear statistical explanation for this interesting effect is given here.
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  • 96
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    International Journal of Quantum Chemistry 31 (1987), S. 113-117 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In a recent paper [5], Ford, Lewis, and O'Connell proposed a remarkable formula for the change in the free energy in terms of the susceptibility alone. This formula came out of their treatment of a quantum oscillator interacting (via dipole coupling) with a blackbody radiation field at finite temperature T. As a result, they found a modification to the Planck formula due to finite line width and a positive energy shift which is of quantum electrodynamical origin.I shall show in this paper that the above result is a general one, not specific to the problem considered, and whose essence can already be traced to the early works of van Kampen and Liftshitz on the theory of van der Waals forces, Maradudin et al. on point defects in lattices, and Mahanty and others on dispersion forces. The above formula can be deduced directly using the argument theorem in theory of contour integration.
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  • 97
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Cellular spin resonance (CSR) or electrorotation is the spinning of cells or other particulate matter in rotating electric fields. The spin rate of the (bio)particle varies markedly with the applied frequency and often is seen to have rather sharp maxima as the frequency is varied. In certain frequency ranges, living cells often are observed to undergo a striking inversion of their spin rate and then spin counter-clockwise (CCW) while the direction of rotation of the applied electric field is clockwise (CW).The CSR spectra are presumably due to dipolar interactions with the applied field, as are the spectra obtained by straightforward dielectrophoresis (DEP) techniques. The two spectra, however, differ radically in the low frequency ranges (below about 1 MHz). It is our objective to explain this apparently anomalous behavior.We believe that the anomaly appears primarily because one is comparing rotational with translational force responses. In the DEP techniques, the simpler translational force arising from the comparative polarizability of cell versus medium (water) gives a straightforward measure of the differential polarizability owing to volume and surface effects pro forma. In the CSR techniques the spin rate reflects the torque on the cells and hence emphasizes polarization at the outer periphery of the cells rather than that of the average overall polarizability.The problem is considered in terms of a living or dead cell rotating with an angular velocity Ω in a fluid medium of viscosity η when it is subject to an electric field rotating at angular frequency ω. It is observed in many experiments that Ω ≪ ω, and also that the sign of Ω for the same cell can change from CW to CCW and back to CW as the applied frequency ω of the CW electric field is increased. Moreover, the sign and magnitude of the CSR spectra differ for living and dead cells. All of these experimental results can be explained quantitatively by using Maxwell's equations and the dielectric properties of a lossy dielectric sphere in an ionically conductive dielectric fluid.
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  • 98
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    International Journal of Quantum Chemistry 32 (1987), S. 105-122 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The fermion unitary group formulation (UGF) of many-body theory is based on the unitary group U(2n) where n is the number of freeon orbitals. This formulation, which conserves particle-number but not spin, is isomorphic to the particle-number-conserving, second-quantized formulation (SQF). In UGF we derive the familiar diagrammatic algorithm for matrix elements, M(Y) = (-1)H+L where H and L denote the numbers of hole lines and loops in the diagram D(Y) of M(Y). The unitary group derivation is considerably simpler than is the conventional, second-quantized derivation that employs time-dependence, Wick's theorem, normal-order, and contractions. In neither fermion UGF nor SQF is spin conserved. We carry out in UGF the spin-projection (symmetry adaptation to SU(2)) of the fermion vectors and obtain with a spin-free Hamiltonian the same matrix elements as with the freeon UGF (part 24 of this series). The fermion unitary group formulation for a spin-free Hamiltonian should be regarded as an alternate path to spin-free quantum chemistry.
    Type of Medium: Electronic Resource
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  • 99
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987), S. 149-164 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Hartree-Fock (HF) equations for the (He)2 system are solved using a suitable exchange perturbation technique. The HF interaction energy is then obtained directly from a rapidly convergent iteration procedure. The method remains convergent for short interatomic distances, where the interaction energy surpasses the energy of intraatomic excitations. The fast convergence of the method is a result of the proper treatment of the exchange-deformation effects. In the region of the van der Waals minimum, these effects account for 50% of the HF deformation energy.
    Additional Material: 5 Tab.
    Type of Medium: Electronic Resource
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  • 100
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 32 (1987), S. 249-264 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The algorithm to derive symmetry orbitals for one-electron band-structure calculations of one-dimensional crystals presented by Božović and Delhalle [1] has been applied to extend the explicit formulation of symmetry-adapted linear combinations of Bloch sums to any line group isogonal to Cn or Cnv. We also point out how the transformation matrices that block-diagonalize the one-electron eigenvalue equation H(k)C(k) = S(k)C(k)E(k) can be determined. Finally, the extended-Hückel block-matrix dimensions of some typical quasi-one-dimensional transition metal compounds have been tabulated in order to give a measure for computational savings achievable by this technique.
    Additional Material: 2 Tab.
    Type of Medium: Electronic Resource
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