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  • 1995-1999
  • 1990-1994  (1,493)
  • 1993  (1,493)
  • Engineering General  (629)
  • Computational Chemistry and Molecular Modeling  (478)
  • Genetics  (251)
  • crystal structure  (135)
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  • 1995-1999
  • 1990-1994  (1,493)
Year
Keywords
  • 1
    ISSN: 1572-8862
    Keywords: Platinum ; ruthenium ; crystal structure ; heteronuclear cluster
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract From the reaction of Ru(CO)5 and Pt(COD)2, COD = 1, 5-cyclooctadiene, the new platinum-ruthenium heteronuclear cluster complex Pt2Ru4(CO)18,1, was obtained in 60% yield.1 has a folded ladder-like structure with alternating pairs of ruthenium atoms and platinum atoms. The cluster of1 can be split to yield the known compound PtRu2(CO)8(η2-dppe),2, (54% yield) by reaction with 1, 2-bis(diphenylphosphino)ethane, dppe, at 25°C. When1 was treated with excess dppe at 40°C, thebis-diphos compound3, PtRu2(CO)6(μ-η2-dppe)2 was obtained (39% yield). Under the similar reaction conditions,2 was converted to3 in 44% yield. All these complexes were characterized by single crystal X-ray diffraction analyses. Compounds2 and3 both contain a triangular cluster of one platinum and two ruthenium atoms, but in2 the bidentate ligand, dppe, chelates the platinum atom and in3 the two dppe ligands bridge the two Pt-Ru metal-metal bonds. Crystal data for1: space group C2/c,a=12.542(2)Å,b=15.350(4)Å,c=15.252(3)Å, β=105.32(2)°,Z=4, 2192 reflections,R=0.025. For2: space group P21/c,a=14.351(2)Å,b=13.486(3)Å,c=19.218(3)Å, β=108.48(1)°,Z=4, 3029 reflections,R=0.027. For3: space group P21/c,a=18.836(6)Å,b=15.559(5)Å,c=23.259(7)Å, β=111.26(2)°,Z=4, 4204 reflections,R=0.038.
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  • 2
    ISSN: 1572-8862
    Keywords: Tungsten ; chloride ; hexatungsten ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract The hexanuclear tungsten cluster complex [W6(μ3-Cl)8Cl6]2−,1 was isolated as a salt of the cation (MeO2CCH2)2N(H)CH2CH2N(CH2CO2Me)2+, EDTEH+, by crystallization from methanol solvent of the product obtained from the reaction of (H3O)2[W6(μ3-Cl)8Cl3] with the disodium salt of ethylenediaminetetraacetic acid. The compound was charcterized by single-crystal X-ray diffraction analysis. The cluster anion contains an octahedral arrangement of six tungsten atoms with chloride ligands bridging the eight triangular faces of the cluster and one chloride ligand terminally coordinated to each of the six tungsten atoms. The cation (EDTEH)+ achieves its positive charge by protonation of one of the nitrogen atoms. Crystal data: space group = P21/a,a=10.689(2) Å,b=22.931(6) Å,c=12.093(3) Å, β=98.41(2)°,Z=2, 2476 reflections,R=0.028.
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  • 3
    ISSN: 1572-8862
    Keywords: Molybdenum ; acetate, carboxylate ; hexamolybdenum ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract The hexamolybdenum cluster complex [Mo6(μ3-Cl)8(O2CMe)6]2−, 1 was isolated as the Bu4N+ salt in 71% yield from the reaction of (Bu4N)2[Mo6(μ3-Cl)8Cl6] with AgO2CMe in CH2Cl2 solvent. The compound was characterized by single crystal X-ray diffraction analysis. The cluster contains an octahedral arrangement of six molybdenum atoms with eight chloride ligands bridging the eight trianglar faces and six carboxylate ligands terminally coordinated through one oxygen atom to each of the six molybdenum atoms. Crystal data: space group =P21/n,a=10.713(3)Å,b=14.43(1)Å,c=21.919(4)Å, β=94.37(2)°,Z=2, 1965 reflections,R=0.036.
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  • 4
    ISSN: 1572-8862
    Keywords: Vanadium ; phenylhydrazine ; nitrogenase ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract Addition of phenylhydrazine to a mixture of VCl3 · THF/N,N-propyl-bis (salicyladimine) and sodium hydride yielded a trinuclear vanadium complex, V3(μ3-O)(μ-Cl)Cl6(μ-η1-η1PhNHNH2)2(PhNHN H2)2(THF), containing two bridging and two terminal phenylhydrazine ligands. The product has been crystallographically characterized (P21/n, a=12.949(2) Å,b=24.061(4) Å,c=22.504(4) Å, β=107.22(1) deg.,V=6697(2) Å3 withZ=4) and was found to contain the first example of bridging monosubstituted hydrazine (phenylhydrazine) ligands.
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Journal of polymers and the environment 1 (1993), S. 65-80 
    ISSN: 1572-8900
    Keywords: Biodegradable plastic ; microbial degradation ; bacterial poly(d-(−)-3-hydroxybutyrate) ; crystal structure ; physiological behavior
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract As one of a series of studies concerning the relationship between the higher-order structure and the biodegradability of a biodegradable plastic, the effects of the crystal structure of the plastic on microbial degradation were investigated. Bacterial poly(d-(−)-3-hydroxybutyrate) (PHB) films which had a wide range of crystallinity were prepared by the melt-quenching method. Results of the microbial degradation indicated that the development of crystallinity evidently depressed the microbial degradability. From scanning electron microscopy (SEM) observations, it is suggested that the microbial degradation proceeded in at least two manners. One was preferential degradation of the amorphous region leaving the crystalline lamellae intact, which was considered to be a homogeneous enzymatic degradation over the surface. The other was nonpreferential spherical degradation on the surface. The SEMs indicate that the spherical holes were the result of colonization by degrading bacteria. The holes varied in size and number with the change of crystal structure. Therefore, it is considered that the crystal structure of PHB also influenced the physiological behavior of the degrading bacteria on the PHB surface.
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  • 6
    ISSN: 1437-160X
    Keywords: Systemic lupus erythematosus ; HLA-DP ; Ro (SS-A) autoantibodies ; La (SS-B) autoantibodies ; Genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary We investigated the association of HLA-DPB1 alleles with the occurrence of autoantibodies against Ro (SS-A) or La (SS-B) using recombinant 52kD-Ro, 60 kD-Ro and La proteins in 177 German patients with systemic lupus erythematosus (SLE). A significant increase in the frequency of DPB1 *0101 is observed in SLE patients compared to healthy controls (P corr.〈0.004). Antibodies against 52 kD-Ro, 60 kD-Ro and La are tested by ELISA and are found with a frequency of 25.4%, 33.9% and 17.5% in the patients, respectively. An association with HLA-DPB1 *0101 is observed for antibodies against La (P〈0.01) and 52 kD-Ro (P〈0.01), but not for 60 kD-Ro in the absence of La/52 kD-Ro. Since there is a strong linkage disequilibrium between DPB1 *0101 and DR3 in the normal population and in SLE patients, and since there is an association between DR3 and SLE, as well as between DR3 and the occurrence of recombinant Ro/La antibodies in SLE patients, we investigated whether DPB1 *0101 is associated per se or via linkage disequilibrium with DR3. DPB1 *0101 in the absence of DR3 is not more common in patients than in controls and not in patients with autoantibodies to Ro and La than without antoantibodies. We conclude that there is no evidence for a direct involvement of DPB1 *0101 in the production of Ro/La autoantibodies in SLE patients.
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  • 7
    ISSN: 1432-1440
    Keywords: Hereditary ataxias ; Friedreich's ataxia ; Genetics ; FRDA locus ; Chromosome 9
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The clinical features of Friedreich's ataxia are described and reevaluated in a group of 14 German patients from 9 independent families. In contrast to previous studies, demonstration of linkage to the Friedreich's ataxia locus (FRDA) on chromosome 9p allowed confirmation of the genetic homogeneity of the disease in the patients under study. Marked variability within families was observed for age of onset of the disease (4–24 years) and for age of becoming wheelchair bound (17–37 years). Electrocardiographic changes were present in all and echocardiographic changes in 50% of the patients. Pathological changes of visual evoked potentials were detected in only 50% of the patients while brainstem auditory evoked potentials and somatosensory evoked potentials were always abnormal.
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Journal of neurology 240 (1993), S. 151-155 
    ISSN: 1432-1459
    Keywords: Genetics ; Complex partial seizures ; Waking and sleep EEGs ; Siblings
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Waking and sleep EEGs were recorded in 29 siblings of 19 patients with complex partial seizures. At least 1 sibling with epileptic activity (EA) was found for 36.8% of the patients. Taking the 29 siblings as a basis, in 7 EA was recorded. Most EA was seen during sleep in stage C (29%). More EA was recorded in female siblings (28% :18%) and in siblings of female patients (56% :20%). All EA was seen in the age range 5–14 years. Siblings with occipital theta-delta activity with a generalization tendency showed more EA (59%) than those without this pattern (8%). Of the siblings of patients with generalized EA 50% showed EA, but only 25% of those of patients with localized EEG patterns.
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  • 9
    ISSN: 1432-0428
    Keywords: Genetics ; DNA polymorphism ; glucose ; phosphorylation ; glycolysis ; chromosome 2 ; insulin resistance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Type 2 (non-insulin-dependent) diabetes mellitus is characterized by decreased levels of glucose 6-phosphate in skeletal muscle. It has been suggested that the lower concentrations of glucose 6-phosphate contribute to the defect in glucose metabolism noted in muscle tissue of subjects with Type 2 diabetes or subjects at increased risk of developing Type 2 diabetes. Lower levels of glucose 6-phosphate could be due to a defect in glucose uptake, or phosphorylation, or both. Hexokinase II is the isozyme of hexokinase that is expressed in skeletal muscle and is responsible for catalysing the phosphorylation of glucose in this tissue. The recent demonstration that mutations in another member of this family of glucose phosphorylating enzymes, glucokinase, can lead to the development of Type 2 diabetes prompted us to begin to examine the possible role of hexokinase II in the development of this genetically heterogeneous disorder. As a first step, we have cloned the human hexokinase II gene (HK2) and mapped it to human chromosome 2, band p13.1, by fluorescence in situ hybridization to metaphase chromosomes. In addition, we have identified and characterized a simple tandem repeat DNA polymorphism in HK2 and used this DNA polymorphism to localize this gene within the genetic linkage map of chromosome 2.
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  • 10
    ISSN: 1432-0428
    Keywords: Genetics ; Type 2 (non-insulin-dependent) diabetes mellitus ; HLA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Epidemiologic data suggest that a parental history of Type 2 (non-insulin-dependent) diabetes mellitus increases the risk of Type 1 (insulin-dependent) diabetes in siblings of a Type 1 diabetes proband. This increase in risk is consistent with a shared genetic susceptibility between Type 1 and Type 2 diabetes. We have previously reported evidence that HLA-DR4-linked factors may represent a homogeneous subset of diabetes susceptibility. First, HLA-DR4 frequency was higher in Type 1 diabetic study subjects with a Type 2 diabetic parent than in Type 1 diabetic subjects whose parents were not diabetic. Second, a DR4-haplotype was transmitted from the Type 2 diabetic parent to the Type 1 offspring more often than expected. These data are consistent with the hypothesis that families with a Type 2 diabetic parent and Type 1 diabetic child, heavily determined by HLA-DR4 linked factors, may represent a homogeneous subset of diabetes susceptibility. In this report, we further explore the relationship between the high-risk HLA antigen (HLA-DR4) in study subjects with differing glycaemic status (National Diabetes Data Group criteria). In this community-based study, we find evidence that HLA-DR4 is increased in study subjects with Type 2 diabetes and may be a marker for Type 2 diabetes susceptibility.
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  • 11
    Electronic Resource
    Electronic Resource
    Springer
    European journal of pediatrics 152 (1993), S. 467-468 
    ISSN: 1432-1076
    Keywords: Hirschsprung disease ; Familial occurrence ; Genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Hirschsprung disease (HD) is genetically heterogeneous with approximately 4% familial occurrence. The recurrence risk is higher in patients with severe involvement. We describe the transmission of histotopochemically proven HD from a father with long aganglionic segment disease to a son with ultrashort segment disease. This observation suggests that the length of involvement in HD is related to the variable expression of the gene defect. It also suggests autosomal dominant inheritance of HD.
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  • 12
    ISSN: 1432-1076
    Keywords: Androgen ; Receptor ; Genetics ; Mutations ; Human
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract Androgen insensitivity syndromes represent one cause of human male pseudohermaphroditism related to defects in the androgen receptor. The formation of a biologically active androgen receptor complex with testosterone and 5α-dihydrotestosterone is required for normal androgen action during fetal development and fifferentiation of the internal accessory sex glands and external genitalia. Cloning of the human androgen receptor complementary DNA and genetic screening of human subjects with the clinical and biochemical features of androgen insensitivity using the polymerase chain reaction, denaturing gradient gel electrophoresis and nucleotide sequencing techniques have led to the identification of molecular defects in the androgen receptor. The complexity of phenotypic presentation by affected subjects with the complete or partial forms of androgen insensitivity is represented by the heterogeneity of androgen receptor gene mutations which include deletions and point mutations, with the latter causing, inappropriate splicing of RNA, premature termination of transcription and amino acid substitutions. The naturally occurring mutations in the androgen receptor of subjects with androgen insensitivity represent a base upon which we can increase our understanding of the structure and function of the androgen receptor in normal physiology, and disease.
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  • 13
    ISSN: 1432-2072
    Keywords: Morphine ; Behavioral activity ; Analgesia ; Rat ; Self-administration ; Genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract The purpose of the current study was to investigate genetic differences between two inbred strains of rats, Fisher-344 (F344/N) and Wistar Albino Glaxo (WAG/GSto), in a number of drug-naive and drug-related behaviors, including oral and intravenous morphine self-administration. F344/N and WAG/GSto rats differed in drug-naive behaviors such as nociception, rearing and sensitivity to lick suppression tests but did not differ in locomotor activity, ambulation or grooming behavior. F344/N rats were less sensitive to thermal stimuli as measured via tail-flick response, and more sensitive to the suppressive effects of intermittent shock in a lick suppression test. The F344/N rats demonstrated a significantly greater amount of rearing in open field tests but did not differ from WAG/GSto rats in locomotor activity, ambulation or grooming behavior. In addition to the behavioral results, naive F344/N and WAG/GSto rats were found to differ in μ and α2 receptor concentrations (F344/N〉WAG/GSto) and in 5HT2 and D2 affinity constants (WAG/GSto〉F344/N). These two inbred rat strains also differed in drug-related behaviors. F344/N rats showed significantly greater depression of locomotor activity at morphine 3 mg/kg than WAG/GSto rats. In addition, F344/N rats consumed significantly greater amounts of morphine in a two-bottle choice procedure and morphine maintained significantly greater amounts of behavior during intravenous self-administration sessions. Importantly, drug maintained behavior was significantly greater than with vehicle only in the F344/N rats during operant self-administration sessions.
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  • 14
    Electronic Resource
    Electronic Resource
    Springer
    European archives of psychiatry and clinical neuroscience 243 (1993), S. 143-149 
    ISSN: 1433-8491
    Keywords: Genetics ; Linkage ; Psychiatric disorders ; Genetic epidemiology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Linkage analysis has been successful in identifying the genetic basis of numerous Mendelian diseases. These successes were due in part to the rapid developments in molecular biology, which have yielded a plethora of informative genetic markers. Although there is strong evidence that the manifestation of schizophrenia and bipolar affective disorders is controlled by genes, no evidence for linkage has been established. For psychiatric disorders, the most important limiting factor is likely to be the lack of single loci with very large effects that occur with any relevant frequency. The difficulties of linkage studies in psychiatric disorders are discussed with reference to non-psychiatric genetic diseases for which linkage to genetic markers has been successful. Recommendations for collecting information to clarify the patterns of transmission of the psychiatric disorders are described.
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  • 15
    Electronic Resource
    Electronic Resource
    Springer
    European archives of psychiatry and clinical neuroscience 243 (1993), S. 131-142 
    ISSN: 1433-8491
    Keywords: Genetics ; Nosology ; Methodology ; Linkage analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Statistical procedures and molecular genetic techniques have attained a fine degree of resolution. Their ability to find disease genes has revolutionized medicine and raised hopes for breakthroughs in psychiatry. However, such breakthroughs may require an equally discriminating nosology. A psychiatric genetic nosology seeks to classify patients into categories that correspond to distinct genetic entities by addressing the problem of diagnostic accuracy: the degree to which a diagnosis correctly classifies people with and without a putative genetic illness. We review methods that deal with misclassification in genetic studies. These are clinical and epidemiological approaches that deal directly with how to define the observable manifestation of a putative genotype. We discuss two groups of methods: those that use known phenotypes and those that design new phenotypes.
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  • 16
    ISSN: 1572-9001
    Keywords: Atomic displacement ; molecular motion ; vibrational analysis ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Atomic displacement parameters determined from a single-crystal X-ray-diffraction study on K2Ru(SO4)2 * 6H2O are analyzed in the molecular mean field approximation. The motion of SO2 2− can be described with a rigid-body model, whereas for [Ru(H2O)6]2+ internal stretching motion and coupling between stretching motion and overall translation are found to be necessary for explaining the observed atomic displacement parameters. Frequencies and force constants of internal motion are not significantly affected by such couplings. K2Ru(SO4)2 * 6H2O crystallizes in the monoclinic space groupP21/c (No. 14), witha = 6.1211(7)Å,b = 12.226(2) Å,c = 8.916(2)Å,β = 105.11(1)°,Z = 2 at 160 K anda = 6.1402(7)Å,b = 12.274(2)Å,c = 8.957(1)Å,β = 105.25(1)°,Z = 2 at 295 K. The structure was refined to a finalR(F) of 0.017 at 160 K and of 0.019 at 295 K for 1438 and 1299 observed reflections withF 0 〉 6σ(F0) and sin θ/λ 〉 0.617 Å1−.
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  • 17
    Electronic Resource
    Electronic Resource
    Springer
    Molecular engineering 3 (1993), S. 43-59 
    ISSN: 1572-8951
    Keywords: Heteropolymolybdates ; heteropolytungstates ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The chemistry of polynuclear oxometalate anions is dominated by molybdenum and tungsten in their highest oxidation state. During the past twenty years this class of compounds has attracted much attention because of their variable applications, e.g. as reagents in analytical procedures, as industrial catalysts and as potential anticancer drugs. In order to obtain model systems for the investigation of the catalytic activity of heteropolyanions we have synthesized and structurally characterized some organo derivatives of polyoxoanions. We secondly focus on Sb(III) and Bi(III) heteropolytungstates to examine the important influence of the unshared electron pair on the resulting structures and properties. Some of these compounds may be regarded as supramolecular aggregates showing inclusion phenomena. In 9 two [SbW9O33]9− anions are linked by a set of six sodium ions forming a nearly planar hexagon. The sodium ions are enveloped by an oxygen cage formed by terminal oxygen atoms of the polyanions and by water molecules. Furthermore, the four anions [Sb2W22O74(OH)2]12−, [Sb2W20Fe2O70(H2O)6]8−, [Sb2W20Co2O70(H2O)6]10− and [Bi2W20Fe2O68(OH)2(H2O)6]6− (in10, 11, 12, 13) may be regarded as transition metal complexes of novel [Sb2W20O70]14− or [Bi2W20O70]14− anions which are serving as ligands. The octahedral coordination sphere of each transition metal is formed by three oxygen atoms of the anion and completed by three water molecules. The Sb(III) heteropolyanion, [Na2Sb8W36O132(H2O)4]22− in (14) includes two sodium and four antimony ions besides four water molecules. Each anion consists of four β-B-SbW9-Keggin fragments linked together by four SbO4-groups, incorporating two sodium and four water molecules effecting an additional connection of the subunits.
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  • 18
    ISSN: 1572-9001
    Keywords: Cobaltocene ; molecular geometry ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The molecular and crystal structures of the monoclinic modification of cobaltocene Cp2Co (P21/n, Z=2) was determined at 100 K and 297 K with new sets of X-ray diffraction data (MoKα radiation, 3995 and 6534 reflections, refinement toR = 0.026 and 0.030 using 1061 and 1299 independent observable reflections, respectively). At 297 K the structure is disordered (similar to the isomorphous ferrocene and nickelocene) with two distinct orientations of the ring, differing in occupancy factors (80% and 20%) and by a rotation angle in the ring plane of approximately 34°. Just as for nickelocene but in contrast to ferrocene, no sharp phase transition was found on cooling Cp2Co to 100 K, but an essential ordering of the Cp-ring position was detected with a decrease of the contribution of the second minor orientation to nearly 10%. On the basis of a careful analysis of the molecular geometry, crystal packing, and anisotropic atomic displacement parameters, a dynamic temperature-dependent nature of the disorder in Cp2Co is assumed.
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  • 19
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 86 (1993), S. 333-338 
    ISSN: 1432-2242
    Keywords: Genetics ; Rice ; Salinity ; Tolerance ; Na-Kratio ; Diallel
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The genetics of salinity tolerance in rice was investigated by a nine-parent complete diallel including reciprocals. Test materials involved susceptible (IR28, IR29, and MI-48), moderately tolerant (IR4595-4-1-13, IR9884-54-3-1E-P1, and IR10206-29-2-1), and tolerant (“Nona Bokra”, “Pokkali”, and SR26B) parents. Twoweek-old seedlings were grown in a salinized (EC = 12 dS/m) culture solution for 19 days under controlled conditions in the IRRI phytotron. Typical characteristics of salinity tolerance in rice were found to be Na+ exclusion and an increased absorption of K+ to maintain a good Na-K balance in the shoot. Genetic component analysis (GCA) revealed that a low Na-K ratio is governed by both additive and dominance gene effects. The trait exhibited overdominance, and two groups of genes were detected. Environmental effects were large, and the heritability of the trait was low. Our findings suggest that when breeding for salt tolerance, selection must be done in a later generation and under controlled conditions in order to minimize environmental effects. Modified bulk and single-seed descent would be the suitable breeding methods. Combining ability analysis revealed that both GCA and specific combining ability (SCA) effects were important in the genetics of salt tolerance. Moderately tolerant parents — e.g., IR4595-4-1-13 and IR9884-54-3-1E-P1 — were the best general combiners. Most of the best combinations had susceptible parents crossed either to moderate or tolerant parents. The presence of reciprocal effects among crosses necessitates the use of susceptible parents as males in hybridization programs. Large heterotic effects suggest the potential of hybrid rice for salt-affected lands.
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  • 20
    ISSN: 1432-2242
    Keywords: Genetics ; Disease ; Mapping ; Breeding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Molecular markers at 103 loci were used to identify the location of quantitative sources of resistance to Exserohilum turcicum in 150 F2∶3 lines of a B52/Mo17 maize population. Host-plant response was measured in terms of the average number of lesions per leaf, the average percent leaf tissue diseased (severity), and the average size of lesions. The location of quantitative trait loci were compared with three loci having known qualitative effects, namely Ht1, Ht2 and bx1. Chromosomal regions containing the Ht1 and Ht2 loci showed a small contribution in determining lesion size, even though alleles with dominant, qualitative effects at these loci have never been reported in either inbred parent. Similar effects were not observed for the number of lesions or for disease severity. Likewise, some contribution was observed for chromosomal regions encompassing the bx1 locus in determining lesion size but not the number of lesions or disease severity. Overall the contribution of loci in the vicinity of Ht1, Ht2 and bx1 was small relative to variation attributable to loci with quantitative effects identified in this study. Molecular-marker-facilitated mapping concurred with previous reciprocal translocation mapping studies on the importance of chromosomes 3, 5 and 7, despite the fact that these studies utilized diverse sources of resistant germplasm.
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  • 21
    ISSN: 1573-9171
    Keywords: iron(II) and ruthenium(II) complexes ; synthesis ; carbonyl, cyclopentadienyl, benzoate ligands ; crystal structure ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Complexes of Fe(II) and Ru(II) of the general formula Cp(OC)2MOC(O)C6H4X-p, where M=Fe, X=H, F (1, 2) or M=Ru, X=H, F (3, 4) have been prepared by reactingp-XC6H4COOAg with [CpFe(CO)2]2 or CpRu(CO)2I. The crystal structures of complexes1–3 have been determined using X-ray diffraction. Compounds1 and3 are isomorphous. The COO group in1–3 is coordinated as a monodentate ligand. As the latter and the CO ligands are electronically non-equivalent, the coordination of the Cp ligand to the metal is slightly asymmetric.
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  • 22
    ISSN: 1573-9171
    Keywords: synthesis ; crystal structure ; azepinethiones ; trimethylsilyl derivative
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The title compounds were prepared and X-ray analysis was performed (R = 0.064 and 0.035 for 1309 and 1637 reflections, respectively). In the former the intramolecular S→Si coordination interactions are absent and the Si atom has undistorted tetrahedral coordination with an S...Si distance of 4.034 Å. Crystals of the latter are built of centrosymmetric dimeric H-complexes (S...H(N) 2.58 Å, the S...HN angle 168°).
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  • 23
    ISSN: 1573-9171
    Keywords: peroxosolvates ; potassium fluoride ; monoperoxosolvate ; thermal stability ; crystal structure ; hydrogen bond
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Potassium fluoride peroxosolvate KF-H2O2 was obtained upon action of a 30% aqueous solution of hydrogen peroxide on solid potassium fluoride dihydrate. As compared to other peroxosolvates, KF-H2O2 is characterized by the highest thermal stability: the decomposition rate constantk 1, at 120°C is 1.4 10−3 min−1, the enthalpy of H2O2 addition to KF is 8.1 kcal/ mol. The correlation between the high stability of KF-H2O2 and the absence of catalytic properties of KF towards H2O2, and the formation of strong intermolecular O-H...F and intramolecular O-H...O hydrogen bonds in the crystal is discussed.
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  • 24
    ISSN: 1573-9171
    Keywords: synthesis ; crystal structure ; pentacoordinated silicon ; chelate cycle
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The X-ray diffraction structural study of the (N-Si)-chelate of 2-(chlorodimethyl-silylmethylthio)-1-pyrroline was carried out (R = 0.033 for 1894 reflections). The Si atom has a somewhat distorted trigonal bipyramidal coordination with the Cl and N atoms in axial positions. The Si-Cl and Si-N distances (2.423(1) and 1.945(1) Å) belong, respectively, to the longest and shortest known Si-Cl and Si-N distances in pentacoordinated silicon derivatives with an axial N-Si-Cl moiety.
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  • 25
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    Russian chemical bulletin 42 (1993), S. 1149-1151 
    ISSN: 1573-9171
    Keywords: Pt(dddt)2 ; organic conductors ; 5,6-dihydro-1,4-dithiin-2,3-dithiolate((dddt)2−) ; sulfur-containing platinum complexes ; crystal structure ; synthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract A neutral metal complex, [Pt(dddt)2]° (1), has been obtained by oxidation of the [Pt(dddt)2]− anion with excess (Bu4N)AuBr4 in nitrobenzene. Crystallographic data for 1∶a=17.854(9) Å,b=18.409(9) Å,c=4.717(5) Å, γ=68.83(2)°, space group P21/n,Z=4,d calc=2.55 g/cm3. In1 two independent centrosymmetric [Pt(dddt)2]° molecules are packed in stacks that form layers parallel to the (110) plane. The molecules of1 in the layers have shortened S...S contacts 3.491(9) Å, and 3.594(10) Å. The average bond lengths Pt-S 2.242(7) Å, S-C 1.71(2) Å and C=C 1.40(3) Å, together with the square-planar coordination of Pt in PtS4, suggest considerable conjugation in the metal cycles.
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  • 26
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    Russian chemical bulletin 42 (1993), S. 1415-1417 
    ISSN: 1573-9171
    Keywords: vanadatrane ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract An X-ray diffraction study of a substituted vanadatrane-1-one (space groupPna21,R= 0.019 for 1394 reflections, the absolute structure was determined) showed that the geometry of its atrane framework is similar to that of the Si- and Ge-analogs. The bond lengths are: V=O, 1.614(2) Å; V←N, 2.329(2) Å; V-O, 1.800–1.806(2) Å. The deviation of the V atom having distorted trigonal bipyramidal coordination from the equatorial plane of the O atoms is 0.35 Å, the 0=V←N bond angle is 179.4(1)°.
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  • 27
    ISSN: 1573-9171
    Keywords: titanasilanes ; titanasilazanes ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract An X-ray structural study of two titanium-containing organosilicon compounds, (Me3Si)3SiTi(NEt2)3 (1) and ClTi[N(SiMe3)2]3 (2), has been performed. The conformation of molecule1 in a crystal is staggered (approximate inherentC 3 symmetry), the Ti-Si and Ti-N bond lengths are 2.671(2) and 1.874–1.890(5) Å, respectively. A crystal of1 consists of one type of enantiomers (the space group is P41212; the absolute configuration has been determined). The structure of2 studied previously has been refined to the value of R=0.029 on the basis of 3442 reflections (the absolute structure has been determined), the Ti-Cl and Ti-N bond lengths are 2.260(1) and 1.926(1) Å, respectively. The strong distortions in the symmetry of the valence environment of the N atoms in the molecules of1, 2, and related structures are caused by electronic effects, in which the conformation of the relevant molecular fragments plays a determining role.
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  • 28
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    Protoplasma 176 (1993), S. 53-63 
    ISSN: 1615-6102
    Keywords: Acetabularia acetabulum ; Gamete release ; Mating efficiency ; Mating physiology ; Gamete half-life ; Genetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary We have improved zygote recovery 11–1,000 fold by optimizing the physiology of gamete release and mating inAcetabularia acetabulum. Gamete release was affected by agar purity, concentration, and volume/gametangial pair. Cold pre-treatment of gametangia (14–30 d at 10°C in the dark) synchronized subsequent gamete release at 21°C in the light. Cold pre-treatment was nearly twice as effective in synchronizing subsequent gamete release when intact, gametangia-bearing caps rather than isolated gametangia were pretreated. Synchronizing gamete release doubled mating efficiency. In a wild-type laboratory strain ofA. acetabulum, there were 1,561±207 gametes/gametangium which had half-lives of 14.5 d in 0.1% seawater-agar. We recovered 48–93% of the expected numbers of zygotes from a mass mating of 8 to 1,226 gametangia and 11–128% of the expected numbers of zygotes from mating single gametangial pairs: the large range in the calculated mating efficiency may be attributable to the variation in the numbers of gametes made per gametangium. Zygote recovery from single gametangial pairs was highly dependent on the volume of mating matrix. In addition, most zygotes recovered were unattached to any other zygotes in the subsequent generation (〉 95% single cells from matings of 1–500 gametangial pairs). Our improvements in mating conditions and zygote recovery (1) have facilitated cell manipulation and culture ofA. acetabulum in the laboratory; and (2) have made controlled crosses for selection and genetic analysis of mutants feasible. These advances have removed a major barrier to genetic analysis of development inAcetabularia.
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  • 29
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    Sexuality and disability 11 (1993), S. 221-228 
    ISSN: 1573-6717
    Keywords: Genetics ; disability ; reproduction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine , Psychology
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  • 30
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    Colloid & polymer science 271 (1993), S. 50-55 
    ISSN: 1435-1536
    Keywords: Polytetrafluoroethylene ; copolymer ; crystal structure ; chain folding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract Molecular-mechanics calculations are performed on model folds proposed in the literature for single crystals of polytetrafluoroethylene crystallized in the phase stable below 19°C, in order to evaluate how they are modified when a fluorine atom is substituted by a bulky group, as occurs in fluorinated copolymers of tetrafluoroethylene. Only intramolecular effects are taken into account (isolated-chain model). An exhaustive analysis has been carried out of tetrafluoroethylene-hexafluoropropylene copolymer. Moreover, the lower energy folds found for such a copolymer have been examined for copolymers with chlorotrifluoroethylene and perfluoroalkylvinylethers, as comonomers. Our calculations show that all the considered comonomers can be arranged in the model folds proposed for the homopolymer, according to the imposed geometric constraints.
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  • 31
    ISSN: 0887-3585
    Keywords: thrombin ; bifunctional inhibitor ; crystal structure ; hirutonis ; drugdesing ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: The crystal structure of the complexes of hirutonin-2 and hirutonin-6 with human α-thrombin have been solved and refined to R-factors of 0.169 (2.0 Å resolution) and 0.162 (201Å), respectively. Hirutonins belong to a family of bifunctional inhibitors bearing a noncleavable moiety mimicking the scissile bond. Hirutonin-2 is an analog of (D)Phe-Pro-Arg-Gly-hirudin49-65; hirutonin-6 has the same N-terminal tripeptide connected to a shortened fibrinogen exosite-binding part by a short, non-peptidyl linker. The hirutonin-6 molecule is well defined in the electron density with the exception of the C-terminal Leu-h61. The linker follows near the bottom of the canyon connecting the active site with the exosite, forms a short antiparallel β-sheet-like arrangement with Leu-40-Leu41 and makes van der Waals contacts with Glu39-Leu40-Leu41 of thrombin. In the thrombin-hirutonin-2 complex, the N- and C-terminal parts of the inhibitor are well or dered (except the C-terminal Gln-h65) while the central portion of the linker is partially disordered. The glycine analog in the P1′ position of hirutonin-2 assumes a conformation similar to that of the canonical form (Bode and Huber (1992) Eur. J. Biochem. 204 : 433-451) and supports the identification of the S1′ site as restricted by His57, Trp60D, Lys60F, and the Cys42-Cys58 disulfide bridge. The carbonyl oxygen of the P1 arginine residue is located in the oxyanion hole formed by the NH groups of Gly193 and Ser195, while the carbonyl carbon is positioned within a short distance, 2.8 Å, from the Oγ of Ser195. This resembles the conformation of the substrate-like inhibitors bound to other serine proteases. The N-terminal (D)Phe-pro-Arg fragment common to both inhibitors binds to thrombin in a fashion very similar to that of other inhibitors having this motif. The binding of the C-terminus of hirutonins to the fibrinogen-binding exosite is similar to that observed in hirudin and hirulog complexes. © 1993 Wiley-Liss, Inc.
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  • 32
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    Proteins: Structure, Function, and Genetics 16 (1993), S. 205-213 
    ISSN: 0887-3585
    Keywords: calcium binding ; crystal structure ; protein stability ; site-directed mutagenesis ; subtilisin ; X-ray crystallography ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: A version of subtilisin BPN′ lacking the high affinity calcium site (site A) has been produced through genetic engineering methods, and its crystal structure refined at 1.8 Å resolution. This protein and the corresponding version containing the calcium A site are describedand compared. The deletion of residues 75-83 was made in the context of four site-specific replacements previously shown to stabilize subtilisin. The helix that in wild type is interrupted by the calcium binding loop, is continuous in the deletion mutant, with normal geometry. A few residues adjacent to the loop, principally those that were involved in calcium coordination, are repositioned and/or destabilized by the deletion. Because refolding is greatly facilitated by the absence of the Caloop, this proteinoffers a new vehicle for analysis and dissection of the folding reaction. This is among the largest internal changes to a protein to be described at atomic resolution. © Wiley-Liss, Inc.
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  • 33
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    Primates 34 (1993), S. 333-346 
    ISSN: 0032-8332
    Keywords: Genetics ; Pedigrees ; Molecular evolution ; Pan ; Hylobates ; Macaca ; DNA sequences ; Microsatellite loci
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Using DNA amplified from shed or plucked hair follicles it is now possible to genotype individual primates at many nuclear and mitochondrial gene loci. Sequence specific primers and the polymerase chain reaction permit the rapid production of sufficient DNA from a single hair for numerous analyses. The direct sequencing of relatively conservative mtDNA sequences like cytochromeb is proving useful in establishing species and subspecies-level relationships. More variable sequences (e.g. the mtDNA control region or D-loop) are useful at the population and social community levels. Paternity exclusion, pedigree relationships, and community structure can be determined using simple sequence length polymorphisms (SSLPs) of multiple hypervariable nuclear microsatellite or simple sequence repeat (SSR) loci. Studies involving captive and free-ranging chimpanzees, gibbons, and macaques illustrate the resolving power of these new non-invasive molecular genetic genotyping techniques.
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  • 34
    ISSN: 1573-1111
    Keywords: 12-membered crown ethers ; crystal structure ; conformation peculiarities ; X-ray analysis ; CH...O contacts
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The crystal structures of two 12-membered crown ethers, benzo-12-crown-4 (1) and naphtho-12-crown-4 (2), have been determined by X-ray analysis. Both structures are molecular. Compound1 is monoclonic,P21/b,a=8.466(3),b=8.019(3),c=33.590(10) Å, γ=90.99(3)o. The unit cell contains two crystallographically independent molecules of1 with similar conformations. Compound2 is also monoclinic,P21/a,a=24.148(8),b=14.535(4),c=7.987(5) Å, γ=102.87(2)o. Two independent molecules in the unit cell have significantly different conformations.
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  • 35
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    Journal of inclusion phenomena and macrocyclic chemistry 15 (1993), S. 159-165 
    ISSN: 1573-1111
    Keywords: Dibenzo-30-crown-10 ; crystal structure ; complexation ; dysprosium isothiocyanate
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Crystalline [Dy(NCS)3(dibenzo-30-crown-10)(H2O)2]·H2O·MeCN can be obtained by slowly evaporating a reaction mixture of Dy(NCS)3·nH2O with dibenzo-30-crown-10 in a solution of acetonitrile. The material crystallizes in the monoclinic space groupP21/n, the cell parameters area=11.450(5),b=23.284(4),c=18.424(6)Å, β=106.28(4)°,V=4715Å3,M=968.47,D x=1.36 g cm−1, μ=17.80 cm−1,F(000)=1972,Z=4.2740 independently observed [I≥3σI] reflections were used in the final least-squares refinement leading to an agreement index ofR=0.085. The Dy(III) ion coordination geometry approximates a square antiprism, involving two water oxygens and three dibenzo-30-crown-10 oxygen atoms and three isthiocyanate nitrogens. Hydrogen bonds are formed between the two water molecules and four uncoordinated crown ether oxygen atoms.
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  • 36
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    Journal of inclusion phenomena and macrocyclic chemistry 15 (1993), S. 341-349 
    ISSN: 1573-1111
    Keywords: Molecular asymmetry ; calixarene ; acetone ; clathrate ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The crystal and molecular structure of the 1:1 clathrate of the asymmetric calix[4]arene,1, and acetone has been determined by X-ray analysis. The crystal data are: tetragonal, space groupP4/n,a=b=12.574(6),c=12.572(6) Å,V=1988(2) Å3,Z=2,D x =1.111 g cm−3,D m =1.108 g cm−3. Least-squares refinement based on 1131 observed reflections withF 0〉3σ(F 0) and anisotropic temperature factors led toR=0.096. In spite of the molecular asymmetric calixarene1 the crystal structure has high symmetry, because a part of the host and guest molecules are in disordered states.
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  • 37
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    Journal of inclusion phenomena and macrocyclic chemistry 15 (1993), S. 385-398 
    ISSN: 1573-1111
    Keywords: Hydrogen bonding ; alicyclic diol ; helical tubulate ; crystal structure ; ferrocene ; squalene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The inclusion compounds of 2,8-dimethyltricyclo[5.3.1.13,9]dodecane-syn-2,syn-8-diol,3, with ferrocene and with squalene have been prepared. The crystal structures of these helical tubulate compounds: (3)3·(ferrocene)0.75 [P3121,a=b=13.7480(6),c=7.0312(5) Å,Z=1,R=0.038] and (3)3·(squalene)0.23 [P3121,a=b=13.677(1),c=7.0533(9) Å,Z=1,R=0.042] are described.
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  • 38
    ISSN: 1573-1111
    Keywords: Werner clathrate ; nickel octahedral complex ; tetrahydrofuran ; crystal structure ; NMR ; molecular recognition ; hydrocarbon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract This paper addresses the general question: what are the significant guest properties selected by this host when interacting with guest molecules in the liquid phase, resulting in cocrystallization of the host and guest? In particular, to what extent do π electrons in a guest molecule effect its potential as a guest? Werner clathrates of the host [Ni(NCS)2(4-ViPy)4] with mixtures of tetrahydrofuran (THF) and cyclic hydrocarbons as guests have been synthesised and their structures elucidated. Clathrate (1): [Ni(NCS)2(4-ViPy)4](1.78 THF)(0.22 cyclohexane), crystallizes in the orthorhombic space groupP bcn a=9.976(6),b=20.630(25),c=19.861 (4) Å,V=4087Å3,Z=4,R=0.087 for 1461 reflections; (2): [Ni(NCS)2(4-ViPy)4](1.76 THF)(0.24 cyclohexene),P bcn ,a=9.987(7),b=20.614(4),c=19.898(4)Å,V=4096Å3,Z=4,R=0.084 for 1304 reflections; (3): [Ni(NCS)2(4-ViPy)4](0.48 THF)(0.52 1,3-cyclohexadiene), tetragonalI41/a,a=16.898(3),b=16.898(3),c=26.463(6)Å,V=7556Å3,Z=8,R=0.120 for 1698 reflections; (4): [Ni(NCS)2(4-ViPy)4](0.36 THF)(1.04 1,4-cyclohexadiene),I41/a,a=16.986(4),b=16.986(4),c=25.896(15)Å,V=7472Å3,Z=8,R=0.103 for 2025 reflections; (5): [Ni(NCS)2(4-ViPy)4](0.35 THF)(1.05 benzene),I41/a,a=17.102(10),b=17.102(10),c=25.498(8)Å,V=7458Å3,Z=8,R=0.118 for 2200 reflections; (6): [Ni(NCS)2(4-ViPy)4](3 benzene), triclinicP1,a=10.432(24),b=11.155(9),c=21.581(7)Å, α=78.70(5), β=82.60(7), γ=74.09(13)°,V=2361Å3,Z=2,R=0.078 for 3427 reflections. Host-guest ratios and, for mixtures of guests, guest1/guest2 ratios, were elucidated by density and NMR. We show that the conformational freedom of the substituted pyridines is not the primary reason for the clathrating ability of Werner hosts. All six structures show no host-guest interaction at the level of van der Waals interactions. As non-bonding interactions are not observed between the host and guest, this study shows that the above host's selectivity by enclathration of particular guest molecules cannot be accounted for by solid state structural analysis.
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  • 39
    ISSN: 1573-1111
    Keywords: Iminophosphoranes ; amine inclusion compounds ; 13C CPMAS NMR spectroscopy ; salt-like crystalline aggregates ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The crystal and molecular structure is reported for the inclusion compound 2-[o-(triphenylphosphoranylidenamino)benzyliden]amino-1H-2,3-dihydroindazol-3-one/isopropylamine/water3b. The crystal structure consists of discrete dimeric salt-like aggregates joined together by strong N+−H...−O−C hydrogen bonds between pairs of centrosymmetrically-related indazolonate anions and isopropylammonium cations. Six other inclusion compounds have been prepared and characterized by NMR [with propylamine (3a), withtert-butylamine (3c), withsec-butylamine (3d), withtert-pentylamine (3e), with 1-methylbutylamine (3f) and withiso-pentylamine (3g)]. Two different arrangements are found, both with the host being in the anionic form. The guests are either: (i) one protonated amine and one water molecule (3b and3f); or (ii) one protonated amine and the corresponding neutral amine (3a, 3c, 3d, 3e and3g).
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  • 40
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    Journal of inclusion phenomena and macrocyclic chemistry 16 (1993), S. 267-272 
    ISSN: 1573-1111
    Keywords: Crown ether ; ytterbium nitrate ; phen ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The title complex was prepared by reacting Yb(NO3)3 (12-crown-4) with 1,10-phenanthroline (hereafter phen) in acetone. It crystallized in the triclinic space group $$P\bar 1$$ witha=10.095(5),b=17.415(4),c=8.710(2) Å α=92.45(2), β=115.83(3), γ=74.08(3)0 andD c=1.85 g cm−3;Z=2. The metal ion in this complex is nine-coordinated to three bidentate nitrate ions, two nitrogen atoms of a phen and a water molecule. The crown ligand is hydrogen bonded to the coordination water molecule. The symmetry change of the crown ether is also discussed.
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  • 41
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    Communications in Numerical Methods in Engineering 9 (1993), S. 639-647 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: An a posteriori point-wise outflow flux recovery scheme which capitalizes on the hyperbolic nature of convection-dominated transport models is proposed. The scheme is seen to be robust in that it can be applied to any upwind finite-difference or finite-element approximation, and gives a superconvergent approximation to the outflow flux.
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  • 42
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    Communications in Numerical Methods in Engineering 9 (1993), S. 757-766 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: A geometrically non-linear global/local technique was developed and tested. This technique uses separate global and local finite-element models. Iteration is used to enforce equilibrium between the global and local models. The results of this initial study suggest that the technique can be used to reduce both computer memory and CPU requirements.
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  • 43
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    Communications in Numerical Methods in Engineering 9 (1993), S. 785-785 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
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  • 44
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    Communications in Numerical Methods in Engineering 9 (1993), S. 773-784 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: A general line search concept is presented, which can be applied for the solution of non-linear equations in the presence of constraint conditions as in arc-length methods in a consistent manner.
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  • 45
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    Communications in Numerical Methods in Engineering 9 (1993), S. 767-772 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: The generalized geometric programming algorithm GGP has been found to be one of the better algorithms for optimizing algebraic functions subject to algebraic constraints. The paper discusses two problems with the GGP algorithm presented by Avriel et al. (1980). The first problem is that, because of the way that constraint tolerances are checked, the checks may pass even when a constraint is violated beyond the acceptable tolerance. This problem can affect an acceleration technique suggested for the algorithm. This paper presents two possible solutions to this problem. The second problem is the algorithm's weakness in handling equality constraints. This problem seems to especially affect the ‘Phase I’ part of the algorithm, which finds a feasible solution from a random starting point. While extensions have been made to get around this limitation, no discussion on why the original algorithm has problems with equality constraints has been made. This paper discusses why the problems exist.
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  • 46
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    Communications in Numerical Methods in Engineering 9 (1993) 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
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  • 47
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    Communications in Numerical Methods in Engineering 9 (1993), S. 797-803 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: The paper presents a filtering algorithm which corrects the results of measurements of certain physical quantities if any additional information about the measured values is known. The algorithm is very effective in one-dimensional as well as in two-dimensional problems where additional constraints are presented in the form of differential equations. For example, this technique can be used to correct the measurements of certain dynamic quantities if some information about motion of examined bodies is known. It can also be used to correct the strain field measurements if the conditions of continuity of strain field are included.
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  • 48
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    Communications in Numerical Methods in Engineering 9 (1993), S. 805-814 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: A computer simulation is made of cellular convection in an anisotropic atmosphere in an attempt to more closely approximate the observed values with those obtained from mathematical models. A finite-element Galerkin technique, with Taylor approximation and Crank-Nicolson, is employed and comparisons are made with the author's earlier finite-element models of isotropic convection and with finite-difference models. It is found that postulates from physics on the effect of anisotropy on cellular atmospheric convection, with its increase in the aspect ratio, are well modelled with this finite-element technique.
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  • 49
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    Communications in Numerical Methods in Engineering 9 (1993), S. 815-824 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: The use of micromechanically based constitutive equations for contact interfaces leads to technically relevant parameters to ill-conditioned finite-element equations. In the paper an augmented Lagrangian technique is employed to overcome this difficulty and to provide a good converging algorithm.
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  • 50
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    Communications in Numerical Methods in Engineering 9 (1993), S. 883-888 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: Elastic contact between a thick shell of revolution and a rigid plate in the case when the plate is brought into contact with the shell by giving a finite displacement to the plate is analysed by the finite-element method. Field-consistent higher-order strain-displacement relations with vanishing shear stresses on the surfaces are used. A finite element based on these relations is developed and used for the analysis. The contact conditions are imposed by use of the Lagrangian multipliers method, and the resulting minimization problem is solved iteratively. This procedure will lead to reduced memory requirements and computation time.
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  • 51
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    Communications in Numerical Methods in Engineering 9 (1993), S. 889-896 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: An explicit formulation and a procedure for the computation of isotropic tensor-valued tensor functions is discussed. The formulation is based on a spectral decomposition in terms of second-order eigenvalue bases, which avoids the costly computation of eigenvectors. As an important result a compact structure of the fourth-order derivatives of general second-order isotropic tensor functions is presented.
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  • 52
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    Communications in Numerical Methods in Engineering 9 (1993), S. 933-935 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
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  • 53
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    Communications in Numerical Methods in Engineering 9 (1993) 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
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  • 54
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    Communications in Numerical Methods in Engineering 9 (1993), S. 937-949 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: For some heterogeneous materials, it is not practical to model the microstructure directly using traditional finite elements. Furthermore, it is not always accurate to use homogenized properties. Macro elements have been developed which permit microstructure within a single element. These macro elements performed well in initial tests.
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  • 55
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    Communications in Numerical Methods in Engineering 9 (1993), S. 957-974 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: The paper deals with the solution of the quasi-harmonic equation by the finite element method in a domain with corners on its boundary. A mapping technique, which can be used for locating the nodes of standard isoparametric elements in a subgrid (patch) of finite elements in the vicinity of a corner singularity point, is presented. The equations of the mapping are based on the analytical singular solution of the problem. Some analytical and numerical results to show the efficiency of the technique are presented.
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  • 56
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    Communications in Numerical Methods in Engineering 9 (1993), S. 975-987 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: An arbitrary Lagrangian-Eulerian model is described for the prediction of metal flow in a steady-state forming process. The formulation is shown to be capable of dealing with free surface and boundary friction; the coupling with thermal effects is also considered. The numerical techniques are based on the finite elements for spatial discretization of the momentum equation and on an explicit integration scheme for discretization relative to time. The mass and energy equations are integrated by a finite-volume method. Details on the application to an orthogonal cutting process are given in the final Section of the paper.
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  • 57
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    Communications in Numerical Methods in Engineering 9 (1993), S. 951-956 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: A procedure was implemented to determine the optimum values for the two parameters of the Zienkiewicz three-level time schemes which could be utilized for the numerical solution of a system of ordinary differential equations. A multivariable search method was implemented to estimate optimum values for these parameters. The resultant optimum three-level time scheme produced very accurate results, satisfied physical reality, and did not produce any oscillations for the various problems that were investigated. The optimum values for the two parameters β and γ in the three-level scheme were β = 0·50005 and γ = 1·0007. A comparison was made between this optimum scheme and other existing three-level time schemes. The optimum scheme demonstrated superior results for all the problems that were analysed. However, the results of the optimization analysis produced a set of optimum parameters that were identical to the values that would reduce the general three-level time scheme into a central-difference two-level time scheme, i.e. β = 1/2 and γ = 1.
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  • 58
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    Communications in Numerical Methods in Engineering 9 (1993), S. 989-1004 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: A new efficient formulation of the 36 degree-of-freedom conforming shallow shell element of an arbitrary triangular shape is presented. This formulation is based on natural co-ordinates and independently assumed natural strain fields, and applied to shallow shell analysis. The 3-node element incorporates the normal displacement and its first and second derivatives plus the tangential displacements and their first derivatives at each vertex. A closed form of the element stiffness matrix is achieved. The form of the stiffness matrix derived in this formulation explicitly reveals the essence of the shallow shell theory.The presented approach results in avoiding definite integrals and matrix inversions, and permits operation with lower-order numerical matrices, which are the same for all elements. The example applications presented demonstrate that accurate predictions of stresses as well as displacements are obtained with only a few elements.
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  • 59
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    Communications in Numerical Methods in Engineering 9 (1993), S. 1005-1011 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Mathematics , Technology
    Notes: The formulation of a straight beam element to eliminate the shear locking phenomenon is presented. The element is based on curvature so that the bending energy is fully represented, and the shear strain energy is incorporated into the formulation by the equilibrium equation. Four examples are chosen to verify the concept of the element employed and its capability of the analysis. The solutions obtained reveal that the element describes the behaviour of the straight beam quite exactly and efficiently, showing no locking and that it is also applicable to the analysis of both thin and thick straight beams.
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  • 60
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    Communications in Numerical Methods in Engineering 9 (1993), S. 1013-1015 
    ISSN: 1069-8299
    Keywords: Engineering ; Engineering General
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    Topics: Mathematics , Technology
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  • 61
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    International Journal of Quantum Chemistry 47 (1993), S. 405-423 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A numerical method is developed to obtain sequences of functions converging to the eigenfunctions of a Schrödinger operator in the Hilbert space L2(-∞, ∞), whose norm is used to introduce the criterion of convergence in the norm and we show that it guarantees the accurate computation of expected values of a symmetric operator. The method consists in solving the Dirichlet problem associated to the eigenvalue problem in the interval [-n, n] by the Ritz method, whose convergence to both eigenvalues and eigenfunctions is guaranteed by the compactness criterion. Using the asymptotic perturbation theory in L2(-∞, ∞), we prove the convergence of both eigenvalues and eigenfunctions of the Dirichlet problem to those of the unbounded system when the interval [-n, n] is expanded. The method is applied to the harmonic oscillator, the Mitra potential, as well as to the potential V(r) = r and the Coulomb and Yukawa potentials; in each case, the convergence of eigenvalues and eigenfunctions is shown. © 1993 John Wiley & Sons, Inc.
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  • 62
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    International Journal of Quantum Chemistry 47 (1993), S. 425-435 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We present a relativistic theory for the nuclear spin-spin coupling tensor within the polarization propagator approach using the particle-hole Dirac-Coulomb-Breit Hamiltonian and the full four-component wave function. We give explicit expressions for the coupling tensor in the random-phase approximation, neglecting the Breit interaction. A purely relativistic perturbative electron-nuclear Hamiltonian is used and it is shown how the single relativistic contribution to the coupling tensor reduces to Ramsey's three second-order terms (Fermi contact, spin-dipole, and paramagnetic spin-orbit) in the nonrelativistic limit. The principal propagator becomes complex and the leading property integrals mix atomic orbitals of different parity. The well-known propagator expressions for the coupling tensor in the nonrelativistic limit is obtained neglecting terms of the order c-n (n ≥ 1). © 1993 John Wiley & Sons, Inc.
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  • 63
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    International Journal of Quantum Chemistry 47 (1993), S. 437-448 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, we present a symmetrical and adiabatic reaction path for hydrogen transfer from methane by methyl by an ab initio method using the 6-31G** basis set with the MP2 corrections for UHF/6-31G** optimized geometries. The theoretical barrier is fitted with the symmetric Eckart function. We, then, take thermal averages of the rate constant (k) considering the discrete nature of the C-H oscillators and the continuous character of the various low-frequency modes of the composite system. Finally, we present a linear relation between log k and temperature. It is shown that this relation gives a good description of the kinetic results of both thermal and photochemical H-transfer reactions in the region of low temperatures. © 1993 John Wiley & Sons, Inc.
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  • 64
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    International Journal of Quantum Chemistry 48 (1993) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 65
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    International Journal of Quantum Chemistry 48 (1993), S. 151-159 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the regime of the molecular-orbital theory, a new approach beyond of the Hartree-Fock approximations is proposed. By an appropriate introduction of the quantum fluctuation into the molecular electronic ground state, the Hartree-Fock equations plus Gaussian fluctuation are obtained. Basically, the procedure proposed consists of an adequate utilization of the Gaussian approximation of the Ising model on a lattice (K.G. Wilson et al., Phys. Rep. C 12, 76 (1974)). It leads to an effective nonlinear Hamiltonian for the molecule for studying nonlinear problems in the molecular electronic structure. © 1993 John Wiley & Sons, Inc.
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  • 66
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    International Journal of Quantum Chemistry 48 (1993), S. 185-200 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We review and update a recently developed one-particle theory of N-electron systems that bears a certain resemblance to density functional (DF) theory and has been put forward by the present author. As distinct from DF theory, the new one-particle scheme applies to any N-electron eigenstate including the ground state. For the latter case, the key equations become identical to those familiar from the Kohn-Sham version of DF theory. The theory given here constitutes the basis for a consistent treatment of normal conductivity and superconductivity, which will be discussed in Part II of this article. © 1993 John Wiley & Sons, Inc.
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  • 67
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    International Journal of Quantum Chemistry 48 (1993), S. 161-183 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An explicitly connected commutator expansion for the average value of an observable in the coupled-cluster theory is derived. Specifically, it is shown that the expectation value of an operator for the state Ψ, related to the Fermi vacuum Φ by the exponential Ansatz ψ = eT Φ, is expressed as a finite commutator series containing the cluster operator T and an auxiliary operator S, defined by a linear equation involving again a finite commutator series in T. The above result is applied to derive the explicitly connected commutator form of the order-by-order many-body perturbation theory (MBPT) expansion for the expectation values and density matrices. We also show how the commutator expansion derived by us can be used as a basis for size-extensive infinite-order summation techniques. An operator technique of eliminating the nonlocal, “off-energy shell” denominators from MBPT expressions is proposed and applied to obtain compact commutator formulas for the expectation values of one- and two-electron operators through the fourth and third order, respectively, and for the correlation energy through the fifth order of perturbation theory. © 1993 John Wiley & Sons, Inc.
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  • 68
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    International Journal of Quantum Chemistry 48 (1993), S. 201-209 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We show that a consistent N-electron theory of a solid can within the Born-Oppenheimer (BO) approximation lead only to normal conductivity or to an insulating state. If one leaves the BO approximation by turning on electron-phonon interaction, one can establish a lower-lying new ground state that has the characteristic properties of the Bardeen-Cooper-Schrieffer (BSC) ground state. We demonstrate that an (N + Nn)-particle Schrödinger equation that describes the motion of N electrons and Nn nuclei of a solid can lead only to phonon-induced superconductivity. © 1993 John Wiley & Sons, Inc.
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  • 69
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    International Journal of Quantum Chemistry 48 (1993) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 48 (1993), S. 219-224 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The energy levels in sodium atoms with quarks attached to the nucleus are obtained using the configuration interaction method. It is found that the calculated 3p (2P) → 3s (2S) electronic transition in the Na-1/3 quark-atom system is in agreement with that predicted by extrapolation of experimental data. Also, ionization potentials of fractionally charged sodium atoms are discussed. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 48 (1993), S. 225-232 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A survey is given of the resemblance theorems associated with various types of orthonormalization procedures having different kinds of symmetry properties appearing in the current literature. It is shown that the proofs for the minimum properties are closely connected with the fact that the Hilbert-Schmidt norm of an operator is always nonnegative and has the lowest value equal to zero. © 1993 John Wiley & Sons, Inc.
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  • 72
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    International Journal of Quantum Chemistry 48 (1993), S. 233-238 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electric-field maps of certain anions and cations of adenine and guanine have been studied. The results are compared with those of neutral adenine and guanine. In all cases, the geometries were fully optimized using the MNDO molecular orbital method and the fields were computed using Mulliken charges. Reactivities and hydrogen-bonding pattern predicted by electric fields, including those of cations, are in satisfactory agreement with experiment. © 1993 John Wiley & Sons, Inc.
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  • 73
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    International Journal of Quantum Chemistry 48 (1993), S. 239-247 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, a general method is presented that allows the derivation of the expansion coefficients of the product of two orthogonal functions provided the generating function is known. For the three classical orthogonal polynomials, the Laguerre, the Hermite, and the Legendre polynomials, the coefficients blmn with φmφn = ∑lblmnφl are derived. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 48 (1993), S. 211-218 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: When second-order Jahn-Teller couplings become strong along “streambeds” on potential energy surfaces, instability reflected in negative curvature along a symmetry-lowering distortion coordinate can take place. The point where such negative curvature sets in is usually not a transition state because the gradient of the potential is usually large there. In this paper, it is demonstrated how to use the local energy, local gradient, local Hessian, and knowledge of how quickly the curvature for the symmetry-breaking mode evolves along the streambed (i.e., the derivative of this curvature) to predict how far to move in the symmetry-breaking mode in search of the desired transition state. It is shown that the Hessian matrix evaluated at the symmetry-broken geometry suggested by this analysis has only one negative eigenvalue. Because this analysis is based on a local approximation to the potential, its predictions are, of course, approximate. As such, they only “suggest” the proper direction and magnitude that one should “step” to move toward a transition state. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 48 (1993), S. 249-256 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electronegativity perturbation theory up to the fourth order has been used to study the preferred isomer of linear triatomic molecules. Systems with 10-16 valence-electron systems are discussed and our results are in good agreement with the experiment. The only exception is the isomers of PNO. The usefulness of the perturbation theory is briefly discussed. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 48 (1993), S. 257-265 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Recurrence relations are derived for the evaluation of two-electron repulsion integrals (ERIs) over Hermite and spherical Gaussian functions. Through such relations, a generic ERI or ERI derivative may be reduced to “basic” integrals, i.e., true and auxiliary integrals involving only zero angular momentum functions. Extensive use is made of differential operators, in particular, of the spherical tensor gradient Ylm(∇). Spherical Gaussians, being nonseparable in the x, y, and z coordinates, were not included in previous formulations. The advantages of using spherical Gaussians instead of Cartesian or Hermite Gaussians are briefly discussed. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 48 (1993), S. 267-276 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The chain-length dependencies of 2Ag and 1Bu excitation energies as well as their unexpected inversion observed experimentally in trans-polyenes have so far been explained satisfactorily only in terms of configuration interactions within the standard Pariser-Parr-Pople (PPP) parametrization scheme with at least double excitations involving prohibitively large computational labor for long polyenes. A simpler calculation allowing nonzero differential overlap and employing restricted (first-order) single-excitation configuration interaction with chain-length-dependent screened potential is shown to provide an adequate alternative for the studies of those basic spectroscopic features of polyene excited states. The screening factor is parametrized in accordance with the chain-length-dependent behavior of the electrical polarizabilities of polyenes derived within the standard PPP approximation scheme. © 1993 John Wiley & Sons, Inc.
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    International Journal of Quantum Chemistry 45 (1993), S. 225-225 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 79
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    International Journal of Quantum Chemistry 45 (1993), S. 189-207 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The atomic statement of the principle of stationary action determines the theorems that establish the mechanics of an atom in a molecule. The atomic torque, power, and current theorems are derived. They, along with the atomic force, virial, and continuity theorems, provide a complete description of the behavior of matter at the atomic level, including the effects of electric and magnetic fields. The atomic power theorem, for example, enables one to determine the atomic or molecular source of the creation and dissipation of power in combustion or in an explosion. An atom in a molecule is an open system and an atomic equation of motion for an observable contains a component corresponding to the flux in its current density through the atomic surface. The differential form of each theorem yields an equation of motion for the corresponding property density in which the same surface flux appears as a divergence of the current density. The differential and integrated atomic theorems complement those for the total system, enabling one to relate the property to its atomic components and ultimately to a local contribution from each element in real space. © 1993 John Wiley & Sons, Inc.
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 45 (1993), S. 235-250 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In 1940, Kramers derived an expression for the rate constant of chemical reactions in viscous media. In this theory, chemical reactions are modeled as Brownian processes in the presence of potential barriers. The derivation of the rate constant is based on the solution of the Smoluchowski equation, a Fokker-Planck-type equation in position space. Kramers' theory has been confirmed for reactions in systems ranging from nuclear processes to biochemical problems. The reaction rate can be obtained from the diffusion currents appearing in the Smoluchowski equation. A Smoluchowski-type equation in position space, similar to the one applied by Kramers, has been used to find a nonlinear Schrödinger equation (NLSE) for dissipative, frictionally damped systems, taking into account wave-particle duality. For several potentials, the NLSE can be solved exactly, and analytic expressions for the currents, appearing in the Smoluchowski equation and necessary to determine the rate constants, can be obtained. These currents are not only stationary, but can also be time-dependent. It will be shown that, essentially, the determination of the time-dependence of the currents can be reduced to the solution of Newton-type equations of motion. © 1993 John Wiley & Sons, Inc.
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  • 82
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    International Journal of Quantum Chemistry 45 (1993), S. 263-294 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This paper considers a Husimi representation of quantum mechanics in which the (stationary) state of a system or ensemble is described by a Husimi function and an observable is described by a phase space function or distribution such that the expectation value of the observable is given by an integral over phase space of the product of that function or distribution and the Husimi function. The density matrix, Wigner function, and Husimi function are considered to be alternative ways of describing the state of a system or ensemble, and methods of recovering the Wigner function or density matrix from the Husimi function are discussed. The classical limits of the Wigner and Husimi functions and of the relationship between them are considered. © 1993 John Wiley & Sons, Inc.
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  • 83
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    International Journal of Quantum Chemistry 45 (1993) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 84
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    International Journal of Quantum Chemistry 45 (1993), S. 333-347 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nonlocal weighted density approximation (WDA) to the exchange and kinetic energy functionals of many-electron systems proposed several years ago by Alonso and Girifalco in the context of density functional theory is used to compute, within the framework of the spherical jellium model, the ground-state electronic density, chemical potential, and total energy of neutral and negatively and positively charged sodium clusters containing up to N = 800 atoms. From these calculations, we study the behavior of the total energies per atom, chemical potentials, ionization potentials, I(N), and electron affinities, A(N). These results are compared with analogous calculations using the well-known Thomas-Fermi-Weizsäcker-Dirac (TFWD) approximation for the kinetic (TFW) and exchange (D) energy functionals. Calculations including the local density approximation (LDA) to the correlation energy in both WDA and TFWD functionals are also presented. © 1993 John Wiley & Sons, Inc.
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  • 85
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    International Journal of Quantum Chemistry 45 (1993), S. 363-383 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We derived the necessary conditions to which the vector coupling coefficients (VCC) amn and bmn, describing atomic L, S-multiplets of pMdN and dNs1 configurations (1 ≤ N ≤ 9, 1 ≤ M ≤ 5), should satisfy. It is shown that for two-open-shell systems under consideration the unknown VCC should satisfy not only usual restrictions resulting from the spheric symmetry, but also some additional equation introduced in the present paper in the form of a postulate. VCC obtained were used for the ab initio calculations (by the general SCF coupling operator method) of several transitionmetal atoms and ions with electronic configurations 3d14p1, 3p43d3, and 3p53d3. To check the presented theory, we carried out a detailed comparison between these results and analogous data, obtained by the atomic Roothaan-Hartree-Fock method [2]. © 1993 John Wiley & Sons, Inc.
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  • 86
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    International Journal of Quantum Chemistry 45 (1993), S. 385-390 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Schrödinger equation for an atom or molecule is expressed in terms of hyperspherical coordinates. The eigenfunction is expanded in a series of orthonormal complete sets: Yλ,μ(Ω), eigenfunctions of generalized angular momentum scalar operator, and Lvn, generalized Laguerre polynomials. The recurrence relation of the expansion coefficients are derived and the eigenvalues can be obtained from the secular equation. © 1993 John Wiley & Sons, Inc.
    Additional Material: 1 Tab.
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  • 87
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have calculated certain dynamic polarizabilities (for both real and imaginary frequencies) for H, He, and H2 and the dispersion-energy coefficients for long-range interactions between them. We have done so in a sum-over-states formalism with explicitly electron-correlated wave functions to describe the states. To be precise, we have determined the dipole (α1), quadrupole (α2), and octupole (α3) polarizabilities of H and He for real frequencies (ω) in a range between zero and the first electronic-transition frequency and for imaginary frequencies (iω) on a 32-point Gauss-Legendre grid running from zero to ħω = 20 Eh, and for H2, we have found the dipole (α), quadrupole (C), and dipole-octupole (E) polarizability tensors for the same real and imaginary frequencies. The dispersion-energy coefficients, obtained by combining the sum-over-states for-malism for the polarizabilities with analytic integration over ω, gave values of C6, C8, and C10 for the atom-atom systems; C06, C26, C08, C28, and C48 for the atom-diatom systems; and C6, C′6 and C″6 for the H2—H2 system. Nearly all the results are considered to be more reliable than those hitherto published and some have been obtained for the first time, e.g., C(iω), E(ω), and E(iω) for H2 and C08, C48, and C48 for the H—H2 system. © 1993 John Wiley & Sons, Inc.
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  • 88
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    International Journal of Quantum Chemistry 45 (1993), S. 403-403 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 89
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    International Journal of Quantum Chemistry 45 (1993) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 90
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    International Journal of Quantum Chemistry 45 (1993), S. 445-470 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, the efficient evaluation of the atomic integrals I =∫r1ar2br3cr23λr13μr12νe-αr1-βr2-γr3dτ with one or two factors rij-2 is described. These integrals are necessary for a lower-bound calculation for Li-like systems using the method of variance minimization or Temple's formula. © 1993 John Wiley & Sons, Inc.
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  • 91
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    International Journal of Quantum Chemistry 45 (1993), S. 409-431 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Coupled-cluster equations for the calculation of the nonexpanded (fully damped) dispersion energy are derived. These equations are solved in the ring approximation using the Møller-Plesset expansion in terms of the fluctuation potentials WA and WB for the individual molecules. Numerical results of high-order perturbative calculations for the He, H2, LiH, H2O, and HF dimers are presented and compared with the converged results computed using the same basis sets. It is found that the convergence of the Møller-Plesset expansion of the dispersion energy in the ring approximation is very fast. The padé approximants still accelerate this already good convergence. For all complexes studied in this paper, the sum of the corrections through the second-order in WA + WB reproduces over 99% of the converged value. The sum of third- and higher-order corrections in the ring approximation is found to be one or two orders of magnitude smaller than the sum of second-order terms not included in the ring approximation and, therefore, may be safely neglected. Thus, it appears that a second-order calculation, which does not require iterating coupled-cluster equations or solving random phase approximation equations, offers the best compromise between accuracy and computational requirements. © 1993 John Wiley & Sons, Inc.
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  • 92
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    International Journal of Quantum Chemistry 45 (1993), S. 471-484 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The integrity bases for representations of the nuclear permutation groups Sn (n = 3,4) in the space of internal coordinates describing AXn molecules are determined. This allows optimal expressions of the molecular potential energy functions in terms of internal coordinates that are totally symmetric with respect to permutations of indistinguishable nuclei. © 1993 John Wiley & Sons, Inc.
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  • 93
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    International Journal of Quantum Chemistry 45 (1993) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 94
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    International Journal of Quantum Chemistry 45 (1993), S. 491-505 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 95
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    International Journal of Quantum Chemistry 45 (1993), S. 489-490 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 96
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    International Journal of Quantum Chemistry 45 (1993), S. 563-572 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A p-version finite element method has been used to calculate second-order pair and total correlation energies for closed-shell Mg and Ar. Comparison with the best results found in the literature suggests that the present values are the most accurate and that the method should perform comparatively better for heavier elements. © 1993 John Wiley & Sons, Inc.
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  • 97
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Some topics in relativistic quantum chemistry are reviewed with special emphasis on 4-currents and 4-potentials. It is shown that, both in molecular quantum theory and in solid-state physics, calculations can include relativistic and magnetic effects by means of 4-currents without an excessive increase in complication, provided that 4-component Dirac spinors are used rather than the Pauli approximation. © 1993 John Wiley & Sons, Inc.
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  • 98
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    International Journal of Quantum Chemistry 45 (1993), S. 587-590 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Consider two orbital sets χk, k = 1…m and η1, 1 = 1…n, which are mutually nonorthogonal. Provided that n 〉 m, at least n - m orbitals of the set {η} can be orthogonalized to the set {χ} by a transformation within the set {η}. The orthogonalization of the remaining orbitals of {η} to the set {χ} requires a transformation in which the χk appear explicitly. The orthogonalization of one orbital set to another is relevant for SCF optimizations in a truncated basis set, in the presence of frozen occupied orbitals. Examples are frozen core calculations, ECP calculations, and embedded cluster calculations, where the cluster is embedded in a frozen environment. A simple orthogonalization scheme, which makes use of a corresponding orbital transformation, is presented. It is suggested that with a small, well-defined extension of the set {η} the complete orthogonalization can be done with a transformation in which the {χ} do not appear explicitly. © 1993 John Wiley & Sons, Inc.
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  • 99
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    International Journal of Quantum Chemistry 48 (1993), S. 67-80 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ground state electron correlation is introduced into the one-particle propagator via coupled cluster theory. This defines a similarity transformation of the Hamiltonian, which leads to the complete separation of the ionization and electron attachment aspects of the propagator. The latter makes it possible to solve for each property independently. Furthermore, the frequency (or energy) dependence which characterizes propagator theory is eliminated by introducing a wave operator formalism. It is shown that this procedure is equivalent to the summation of certain types of terms in the electron propagator perturbation expansion to infinite order. Finally, the resulting equations are found to be equivalent to those of the Fock-space coupled-cluster (or equivalently the equation of motion coupled-cluster) method, which provides an explicit wave function for each state, demonstrating the connection between these different approaches for the calculation of ionization potentials and electron affinities. Understanding this relationship permits new and powerful approximations to be proposed. © 1993 John Wiley & Sons, Inc.
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  • 100
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    International Journal of Quantum Chemistry 48 (1993), S. 155-162 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Additional Material: 7 Tab.
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