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  • 1980-1984  (1,189)
  • 1975-1979
  • 1983  (1,189)
  • Analytical Chemistry and Spectroscopy  (803)
  • Computational Chemistry and Molecular Modeling  (329)
  • Electron microscopy
  • Nuclear reactions
Material
Years
  • 1980-1984  (1,189)
  • 1975-1979
Year
Keywords
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Colloid & polymer science 261 (1983), S. 373-374 
    ISSN: 1435-1536
    Keywords: Electron microscopy ; short-time staining ; nodular structure ; crystallization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-2307
    Keywords: Mycosis fungoides ; Premycotic lesions ; Parapsoriasis en Plaques ; Langerhans cells ; Virus-like particles ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Skin biopsies of patients with small and large plaque parapsoriasis, premycotic lesions and mycosis fungoides in different stages were examined. Special attention was paid to the relationships between Langerhans cells (LC) and the neighbouring keratinocytes and lymphocytes. At the contact areas of LC and keratinocytes as well as LC and lymphocytes, particular cell membrane phenomena were observed. Aggregations of Langerhans granules and fusions of granules with LC plasma membranes were found exclusively at LC-keratinocyte interfaces. At LC-lymphocyte contact zones cell membrane appositions were seen. In all cases investigated, virus-like particles were mainly ound in LC and indeterminate cells (IDC). In 3 cases lymphocytes also contained these particles. It was of particular interest that virus-like particles were observed in skin specimens of all diseases investigated. Discrimination of these particles from other cellular organelles - especially lysosomes- was difficult, however. The significance of our findings, particularly regarding to the supposed virus aetiology of cutaneous T cell lymphomas, is discussed.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-0584
    Keywords: Multiple myeloma-Plasma cell ; Electron microscopy ; Fluorescent antibody technique
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary A case of “nonsecretory” myeloma is described. The patient had typical osteolytic lesions and marked infiltration of myeloma cells in the bone marrow, and plasma cell leukemia. A good partial remission was obtained with Melphalan, but the patient relapsed and died one year later. Immunofluorescent and immunoelectroscopic studies on the myeloma cells demonstrated the presence of cytoplasmic γ-and κ-chains at the initial stage and of only κ-chains at a relapse. The electron microscopic method for polysome analysis indicated that both L-and H-chains were synthesized on membrane-bound polysomes initially, but the ability to produce H-chain was missing at the relapse.
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1432-1335
    Keywords: Murine lymphoma development ; Virus infection ; Thymus ; Reticular epithelial cells ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary This report describes two types of reticular epithelial cell in the thymic cortex of the BALB/c mouse, an immature and a mature form. During early stages of lymphoma development, i.e., 2–6 weeks postinfection (p.i.) with Moloney leukemia virus (M-MuLV), activation of the epithelial cells is observed. Although the percentage of these cells in the total cell population of the thymic cortex remains constant during that time, the number of mature epithelial cells is significantly increased in infected animals. Subsequently, about 6 weeks p.i., the number of immature epithelial cells starts to increase, whereas the number of mature reticular epithelial cells declines and the appearance of the mature epithelial cells changes drastically. The results of light and electron microscopic studies indicate degeneration of the mature reticular epithelial cells at the onset of lymphoma development at a time when the first deficiencies in the immunologic competence of the reticular epithelial cells are apparent.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Journal of cancer research and clinical oncology 106 (1983), S. 234-239 
    ISSN: 1432-1335
    Keywords: Osteosarcoma ; Collagen types ; Immunofluorescence microscopy ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Sixteen cases of typical highly malignant osteosarcoma were investigated by light, electron, and immunofluorescence microscopy to demonstrate the presence of collagen types I–III. It was shown that, in light-microscopically anaplastic areas of the tumor, collagen type III predominates, while only very few membranes of collagen type I are observed. Ultrastructurally, the cells are characterized by numerous free ribosomes in their cytoplasm and only a few membranes of granular endoplasmic reticulum (ER). In osteoblastic areas, collagen type I is increased, while type-III collagen is decreased. The cytoplasm of cells contains markedly more granular ER. An increasing mineralization of matrix is observed. In fibroblastic areas of the tumors, collagen types I and III are codistributed. Tumor cells have a fibroblast appearance with elongated nuclei and well developed granular ER. The chondroblastic areas, characterized by immature neoplastic cartilage, contain varying amounts of collagen type II. Chondroblast-like tumor cells have typical ring-shaped membranes of granular ER in their cytoplasm. The evidence of different collagen types in osteosarcomas lends additional support to the concept that a pluripotent mesenchymal cell is the stem cell of osteosarcomas.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Virchows Archiv 400 (1983), S. 119-142 
    ISSN: 1432-2307
    Keywords: Thyroid neoplasms ; Hemangioendothelioma ; Electron microscopy ; Factor VIII-related antigen (FVIIIRAG) ; Tumour classification
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary 65 cases of hemangioendothelioma (HE) of the thyroid were accepted as such after control of slides of surgical or autopsy specimen or both. In a few of the more recent cases material could be examined by electron microscope and in some the search for factor VIII-related antigen (FVIIIRAG) was carried out. The demonstration of Weibel-Palade bodies in tumour cells in two cases and the evidence of FVIIIRAG in tumour cells of at least two cases, including primary tumour and distant metastasis, finally show, that the hemangioendothelioma of the thyroid is not simply an anaplastic carcinoma with some peculiar features; at least some of these tumours are true endotheliomas. The proposal that the term hemangioendothelioma be eliminated from the classification of thyroid tumours is therefore unfounded.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    Springer
    Virchows Archiv 400 (1983), S. 187-199 
    ISSN: 1432-2307
    Keywords: Malignant fibrous histiocytoma ; Liposarcoma ; Sarcoma ; Soft tissue neoplasms ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary An ultrastructural comparison of 7 examples of myxoid malignant fibrous histiocytoma (myxoid MFH) with 6 of myxoid liposarcoma is described. Despite certain histological differences between the two, electron microscopy was more valuable in differentiating MFH from liposarcoma. Electron microscopically, MFH contained a variety of cell types including histiocyte-like, fibroblast-like, intermediate-type, xanthomatous, multinucleated tumor giant cells and undifferentiated cells. Liposarcoma was composed mainly of lipoblasts at various stages of differentiation with a minority of undifferentiated cells and fibroblast-like cells. In contrast to the component cells of the MFH, these lipoblasts were characterized by abundant cytoplasmic glycogen, numerous pinocytotic vesicles and a discontinuous basal lamina in addition to large lipid droplets.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    Virchows Archiv 400 (1983), S. 97-106 
    ISSN: 1432-2307
    Keywords: Tracheobronchial amyloidosis ; Electron microscopy ; Amyloid fibril ; Fibroblast
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The author reports on the electron-microscopic examination of the diffuse tracheobronchial amyloidosis of a 51-year-old patient. The amyloid deposits were located in the lamina propria of the tracheal and bronchial mucosa. At the edge of the nodular deposits, condensation and radial arrangement of amyloid fibrils could be seen. Closely connected with the amyloid, active fibroblasts were present and their cytoplasm contained amyloid fibrils. The cell membrane of the fibroblasts was missing in part. Intracellular amyloid fibrils mingled with extracellular deposits. It can be assumed that active fibroblasts play an important role in local amyloid formation.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 59 (1983), S. 295-303 
    ISSN: 1432-0533
    Keywords: Menkes' kinky hair disease ; Brain degeneration ; Mitochondrial abnormalities ; Distribution ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The brain of an autopsy case of Menkes' kinky hair disease (MKHD), after routine histological examination, was studied extensively by electron microscopy, particularly the mitochondrial alterations. There were widespread mitochondrial abnormalities, including enlargement with tubulo-vesiculated cristae, swelling, and dense body formation and occasional accumulation of glycogen within mitochondria, in addition to increased numbers of mitochondria in some neurons. These abnormalities of mitochondria were present in decreasing severity in the following: Purkinje cells, neurons of the molecular and granule cell layers of the cerebellum, and neurons of the cerebral cortex, globus pallidus, lateral nuclei of the thalamus, caudate nucleus, and the myelinated axons in the white matter. This distribution and the degree of mitochondrial abnormalities in the various structures of the brain were compared with those of degenerative lesions in the respective structures. The comparison disclosed that there was a positive correlation between the two. The mitochondrial enlargement and swelling as in the present study had been well documented in the brain of the brindled mouse; mitochondrial dense bodies had also been reported in previous case reports of MKHD by other authors. The present study strongly suggests that the mitochondrial disease is an essential abnormality and may be responsible for the progressive degeneration of the CNS in MKHD.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1432-0533
    Keywords: Human sural nerve ; Electron microscopy ; Myelin sheath thickness ; Internodal length ; Node of Ranvier ; Organic solvents ; Glycogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary An ultrastructural and morphometric study was performed on sural nerve biopsies of four industrial spray painters (35–59 years) and 11 controls (6–64 years). No difference could be shown in spray painters and age-matched controls as to the number of myelinated nerve fibres per area, their size distribution, variation of internodal length along single nerve fibres or the ratio between the number of myelin lamellae and the axon circumference. There was marked scattering of the two latter parameters in older exposed and control individuals. The distribution of NADH2-tetrazolium reductase activity was similar in exposed and control cases. The general ultrastructural appearance of nodal-paranodal regions in controls conformed with that noted in experimental animals. The overall ultrastructural organization and age-related changes of nerves of exposed cases were similar to those of control cases except for a presence of paranodal axonal mitochondria which contained glycogen-like particles in exposed cases. In one exposed case abundant dispersed or clustered glycogen-like particles were seen in the paranodal axoplasm. These findings are suggested to be an effect of chronic exposure to organic solvent vapours. Ageing seems, however, to have a much greater impact on the morphology of the sural nerve fibre than occupational exposure to organic solvent.
    Type of Medium: Electronic Resource
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  • 11
    ISSN: 1432-0533
    Keywords: Motor end-plates ; Abnormal differentiation of motor end-plates ; Arthrogryposis ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The syndrome of arthrogryposis and palatoschisis (SAP), an inherited syndrome of muscular hypotonia in Charolais cattle, was used as an experimental model to study neuromuscular differentiation. The ultrastructural development of muscle, peripheral nerve, and neuromuscular junctions was studied to determine the sequence of events preceding hypotrophic changes in the skeletal muscles of affected calves at birth. Dorsiflexion of the metatarsophalangeal joints in the hindlimbs occurred in fetuses older than 3 months of age, but hypotrophic changes in skeletal muscle, manifested as small fibers scattered among larger and occasional degenerating fibers, was not apparent until late in gestation, affecting 8-month-old fetuses and neonatal calves. Electron microscope and enzyme histochemistry studies disclosed differentiation of skeletal muscle into fiber types which is consistent with changes expected from disuse and does not indicate a primary myopathic abnormality. Abnormal differentiation of neuromuscular junctions (NMJ), composed of several separated axonal endings terminating in shallow synaptic gutters, indicated impaired maturation of the synapse. The earliest indication of abnormal NMJ was observed in a 5-month-old SAP fetus. The clinical signs and pathologic changes found in the neuromuscular junction and skeletal muscle of SAP fetuses are consistent with an embryologic defect occurring during development of the central nervous system (CNS) that affects the integrated function of the motor neurons to the limbs. However, diversification of myofibers by histochemistry and ultrastructural parameters is evidence that the intrinsic physiologic properties of spinal motor neurons were retained.
    Type of Medium: Electronic Resource
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  • 12
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 60 (1983), S. 14-18 
    ISSN: 1432-0533
    Keywords: Rathke's cleft cyst ; Craniopharyngioma ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The electron-microscopical appearance of a Rathke's cleft cyst is described. The cyst lining is seen to consist predominantly of secretory columnar epithelium, both ciliated and non-ciliated. There are also epidermoid cells occurring singly or in squames. The histogenesis of Rathke's cleft cysts, in relation to craniopharyngiomas, is discussed.
    Type of Medium: Electronic Resource
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  • 13
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 61 (1983), S. 116-122 
    ISSN: 1432-0533
    Keywords: Methylmercury ; Mitochondria ; Cerebral cortex ; Postnatal development ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Neonatal rats received s.c. injections of methymercuric chloride (MeHg) in physiological saline (1.5 mg Hg/kg b.wt.) at 48-h intervals from postnatal day 2 to day 50. Littermate controls were injected with an equivalent volume of saline. All animals were perfused on day 51 and blocks of cerebral cortex were prepared for electron microscopy. Ultrastructural changes in mitochondria were evident in the dendrites, axons and presynaptic terminals of cortical neurones in the MeHg-treated animals. Many mitochondria were condensed with an increased electron density of the inner matrix. Some profiles exhibited regressive alterations, including a disruption of cristae and the inner membrane with an accumulation of electron-opaque material in the matrix. Membranous whorls were found in association with the most degenerate mitochondria. A morphometric analysis of mitochondrial profiles in the neuropil of layer I revealed a 24% decrease in average profile area and a 16% increase in the number of profiles per micrograph in the MeHg-treated animals. These pathological changes in mitochondrial ultrastructure are consistent with an inhibition of mitochondrial respiration. The observed increase in the number of mitochondrial profiles may reflect a compensation by cortical neurons for the reduced efficiency of aerobic metabolism in the individual organelle.
    Type of Medium: Electronic Resource
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  • 14
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 59 (1983), S. 246-254 
    ISSN: 1432-0533
    Keywords: Muscle spindle ; Electron microscopy ; Terminal nerves ; Denervation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Intrafusal and extrafusal nerve segments in muscle spindles from tumbricalis muscles of the hind-paw of the rat were studied by electron microscopy from 10h to 5 days after severance of the sciatic nerve. In several spindles examined, nerve fascicles piercing the spindle capsule in the equatorial region contained a large myelinated, a smaller myelinated and an unmyelinated fiber. Unmyelinated fibers were not present in small fascicles leading to the polar region. The changes in the extrafusal nerve segments followed the pattern of Wallerian degeneration. Intra-axonal glycogen deposits were prominent in sensory fibers. The unmyelinated fibers were the earliest to degenerate, the large myelinated ones the latest. Differences between motor and sensory fiber degeneration emerged in their preterminal intrafusal segments and were analogous to those of the nerve endings. Terminal nerve fibers in the spindle equator succumbed to attack of mesenchymal cells, leaving extensive basement membrane reduplications around myelin debris-laden Schwann cells, while polar fibers were engulfed by Schwann cell processes, leaving regular bands of Büngner.
    Type of Medium: Electronic Resource
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  • 15
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 60 (1983), S. 149-152 
    ISSN: 1432-0533
    Keywords: Adrenoleukodystrophy ; Cerebello-brainstem involvement ; Electron microscopy ; Biochemistry
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary A case of adrenoleukodystrophy was studied morphologically and biochemically. The patient was a 28-year-old man with no family history of adrenoleukodystrophy. His neurologic symptoms were cerebellar ataxia, spastic paraplegia, pseudo-bulbar palsy, and a minimal visual disturbance, with neither adrenal nor hypogonadal symptoms. The morphological and biochemical findings in this case are identical with those in typical adrenoleukodystrophy, but the topographical distribution of the lesions is distinctly different. The changes selectively affect the white matter in the cerebellum and brain stem in contrast to minimal involvement of the occipital white matter.
    Type of Medium: Electronic Resource
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  • 16
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 60 (1983), S. 309-313 
    ISSN: 1432-0533
    Keywords: Hirano bodies ; Extraocular muscle ; Aging ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Thirty-three rectus superior extraocular muscles from 23 autopsy cases, all over 60 years, were examined. Eosinophilic inclusions (Hirano bodies) were observed in all the muscles; they were stained deep red by Masson's trichrome stain and were positive for protein stain. They consisted of a collection of filamentous structures of two types: (1) a regular array of filaments 100 Å in diameter which sometimes were arrayed in perpendicular planes and (2) another type in a herring bone or ladder-like pattern. Both structures were closely associated with the accumulated thin filaments 50–60 Å in diameter (actin?) in the subsarcolemma. The frequent appearance in aged muscle fibers of Hirano bodies indicates that their formation is a change closely related with aging.
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  • 17
    ISSN: 1432-0568
    Keywords: Electron microscopy ; Mesonephric duct ; Fetus ; Glycogen ; Human development
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Human mesonephric duct epithelial cells contained empty appearing regions in the infranuclear cytoplasm when prepared for transmission electron microscopy using glutaraldehyde and osmium fixation. The same regions stained positively with PAS in Epon sections for light microscopy suggesting that glycogen was present. Incubation with saliva abolished the reaction. For electron microscopy the glycogen stained very intensely if a mixture of osmium tetroxide and potassium ferrocyanide was used instead of osmium alone. Glycogen accumulations were present between the ages of 5 to 10 weeks and absent at the age of 15 weeks. Reports by others indicate that glycogen may be present in different reactive forms in relation to its staining behaviour after various fixatives. The present results, and similar studies in other tissues, indicate that osmium tetroxide-potassium ferrocyanide fixative should be used routinely for preservation of embryos and fetuses and where indicated, for ultrastructural identification of glycogen and cytoplasmic filaments in clinical specimens.
    Type of Medium: Electronic Resource
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  • 18
    Electronic Resource
    Electronic Resource
    Springer
    Archives of dermatological research 275 (1983), S. 156-158 
    ISSN: 1432-069X
    Keywords: Sarcoidosis ; Fcγ-receptors ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Immune complexes of horseradish peroxidase (HRP) and rabbit IgG antibodies to HRP were used to study the Fcγ-receptors in granulomas of cutaneous sarcoidosis. Cryostat sections of skin biopsies were incubated with HRP-anti-HRP, and the peroxidase activity was demonstrated with 3,3-diaminobenzidine tetrahydrochloride and H2O2. Most cells in the granulomas, both epithelioid and giant cells, were stained. By electron microscopy, the reaction products were localized to the plasma membranes of the cells as well-defined granular deposits. No reaction product was demonstrated intra- or extracellularly.
    Type of Medium: Electronic Resource
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  • 19
    Electronic Resource
    Electronic Resource
    Springer
    Archives of dermatological research 275 (1983), S. 407-411 
    ISSN: 1432-069X
    Keywords: Langerhans cell ; ATPase ; Ia-like antigen ; OKT6 ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Type of Medium: Electronic Resource
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  • 20
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 60 (1983), S. 271-277 
    ISSN: 1432-0533
    Keywords: Tuberous sclerosis ; Subependymal giant-cell tumor ; Immunohistochemistry ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Tissue from seven patients with tuberous sclerosis and subependymal giant-cell tumors was examined with special stains, immunohistochemistry, and electron microscopy. Immunoreactive glial fibrillary acidic protein (GFAP) was not found in the giant cells of four tumors, but was present in some tumor cells in the other three. Immunoreactive S-100 protein was present in tumor cells of six cases; it was also seen in more tumor cells than was GFAP. Electron microscopy was similar in all cases and showed that the tumor cells had numerous organelles — many dense bodies thought to be primary lysosomes, swollen mitochondria, Golgi complexes, rough and smooth endoplasmic reticulum, free ribosomes, and sparsely distributed intermeadiate filaments. In one case, neurosecretory granules, microvilli, and synapses were observed. In another subject, prominent, thick bundles of glial filaments were seen. These findings suggest that the tumor is made up of unique cells in addition to cells with recognizable neuronal or astrocytic features.
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  • 21
    Electronic Resource
    Electronic Resource
    Springer
    Acta neuropathologica 59 (1983), S. 139-144 
    ISSN: 1432-0533
    Keywords: Decompression sickness ; Brain ; Gas bubbles ; Blood-bubble interface ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Rats were exposed to 6.1 bar (abs.) air for 90 min and subsequently decompressed to the ambient pressure. After a decompression rate of 6.8 bar/min pial veins and superior sagittal sinuses were found to contain gas bubbles; no intravascular bubbles were observed subsequent to a decompression rate of 1.5 bar/min. Under the electron microscope platelet aggregates were observed at both the electron-dense layer of the blood-bubble interface and in pial veins with no bubbles. It is concluded that during decompression sickness bubbles and both activation and aggregation of platelets occur in intracranial veins. Subsequent venous congestion may contribute to the neuronal lesions and symptoms of acute decompression sickness.
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  • 22
    ISSN: 1432-069X
    Keywords: Pityriasis rubra pilaris ; Histochemistry ; Autoradiography ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Five patients with pityriasis rubra pilaris (PRP) were analyzed by means of light and electron microscopy as well as by histochemistry and autoradiography. The results were compared with findings in psoriasis vulgaris. In PRP we found a moderate increase of the labeling index of epidermal cells, a highly increased labeling index of dermal infiltrating cells, and a mild spongiosis, and in the stratum granulosum, a decreased number of tonofilaments and an increased number of keratinosomes. The horny layer in PRP showed a pronounced histochemical and electron microscopical parakeratosis, even when histological parakeratosis was absent. In contrast with psoriasis vulgaris, there was no exocytosis of polymorphonuclear leucocytes into the epidermis, the papillomatosis index was normal, and there were no tortuous capillaries in the dermal papillae. The stratum granulosum was always present and sometimes thickened, showing electron microscopical changes different from those referred to in psoriasis. These changes point to a relatively distinct pattern of epidermal changes in PRP.
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  • 23
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    Electronic Resource
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    Annals of hematology 47 (1983), S. 13-19 
    ISSN: 1432-0584
    Keywords: Acute lymphoblastic leukemia ; Intracytoplasmic inclusions ; Mitochondria ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary A patient with acute lymphoblastic leukemia (ALL) with cells containing two types of cytoplasmic inclusions is described. The inclusions appeared as glubular bodies containing electron dense material with homogenous structure and as crystalloid formations confined in organelles with structure similar to that of the surrounding mitochondria. In distinction to other reports, these structures were not related to the endoplasmic reticulum. The possibility that some of them represented altered mitochondria is discussed.
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  • 24
    ISSN: 1432-0738
    Keywords: Cadmium ; Toxicology ; Electron microscopy ; Endothelium ; Liver
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract With quantitative techniques at electron microscopical level chromatin condensation and emptying of the interchromatin space have been established in the nuclei of the endothelial cells of small uterine vessels. The nuclear and cytoplasmic changes after cadmium administration show much similarity between endothelial cells of small uterine vessels and cultured liver parenchymal cells. Cytoplasmic changes in both cell types after cadmium administration are suggestive of a disturbance in ribosomal RNA synthesis as the main cause leading to ultimate cell lysis.
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  • 25
    Electronic Resource
    Electronic Resource
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    Archives of toxicology 53 (1983), S. 151-163 
    ISSN: 1432-0738
    Keywords: Fenofibrate ; Human liver ; Electron microscopy ; Morphometry ; Peroxisomes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract In rodents fenofibrate shares with other triglyceride-lowering agents the potential to increase the liver peroxisome population. It was therefore of interest to look for this effect in hyperlipoproteinemic patients receiving this drug. Light and electron microscopy of liver biopsies from a group of 10 patients treated with fenofibrate and from another group of 15 receiving diet only, show no morphological difference between both groups. In contrast with the rodent data the morphometric study reveals no significant changes in the number (fenofibrate group: 7.96 1010 cm−3; group receiving diet alone: 8.41 1010 peroxisomes/cm3 of liver tissue) or in the size (fenofibrate group: Diameter=0.53±0.07 μm — group receiving diet alone: 0.50±0.06) of peroxisomes. The difference between our results and those obtained consistently in rodents may be due to the relatively low dose in man and/or a species-dependant difference in enzyme content of liver peroxisomes, itself related to an apparent difference in the way in which lipids are handled.
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  • 26
    ISSN: 1432-0983
    Keywords: Allomyces macrogynus ; Mitochondrial DNA ; Electron microscopy ; Restriction enzyme map
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The mitochondrial (mt) DNA of the aquatic phycomycete Allomyces macrogynus is a circular molecule with a size of 56.1 kbp. The cleavage sites for the restriction enzymes SalI and PvuI were mapped by comparing the partial denaturation patterns of isolated restriction fragments with the pattern of the intact circle. The genes coding for the small and large ribosomal RNA (rRNA) were located on the restriction map by heteroduplex and R-loop analysis. The gene coding for the large rRNA contains an intervening sequence, app. 0.7 kbp in size, near the 3′-end of the gene. The two rRNA genes are encoded on the same strand of the mtDNA and separated by a region of 17–18 kbp. This rRNA gene organization is similar to that found with members of the Ascomycetes.
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  • 27
    Electronic Resource
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    Journal of molecular medicine 61 (1983), S. 593-599 
    ISSN: 1432-1440
    Keywords: Small intestine ; Early ischemia ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The morphology and chronology of an absolute ischemia was investigated on the small intestine of man and rat. It could be shown that the morphogenesis of ischemic damage to the intestinal mucosa in man does not differ from that in the rat. However, there are crucial and in therapeutic terms significant differences in the time course of the ischemic damage to the intestinal mucosa. Whereas in the small intestine of the rat, the first appreciable alterations — detachment and disruption of the lining epithelium at the villous tip — are already to be observed after absolute ischemia lasting 15 min, in the human small intestine the same lesions only occur after 4 h. A comparable complete necrosis of the small intestinal mucosa was detected in the rat after 7-h ischemia, and in man after 44-h ischemia.
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  • 28
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    Archives of microbiology 135 (1983), S. 169-175 
    ISSN: 1432-072X
    Keywords: Photosynthetic membranes ; Electron microscopy ; Image processing ; Ectothiorhodospira halochloris ; Ectothiorhodospira abdelmalekii ; Rhodopseudomonas viridis ; Rhodopseudomonas sulfoviridis ; Thiocapsa pfennigii
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The photosynthetic membranes of the five bchl b-containing bacteria Ectothiorhodospira halochloris, E. abdelmalekii, Rhodopseudomonas viridis, R. sulfoviridis and Thiocapsa pfennigii have been investigated by electron microscopy and digital image analysis. All five species have the photosynthetic complexes hexagonally arrayed in the membrane with lattice spacings close to 13 nm, except for R. sulfoviridis and T. pfennigii which display somewhat smaller (∼12.5 nm) lattice spacings. Correlation averaging which imposes less stringent requirements on the lattice perfection than conventional Fourier filtration techniques has been employed to elucidate the structure of the photosynthetic complexes. Their basic organization, i.e. a ring, probably containing the light-harvesting (LH) polypeptides, surrounding a core (the “reaction centre”) appears to be almost identical for all species under scrutiny. Despite a resolution of ∼1.6 nm, however, little further significant substructure can be deduced from the averages; possible reasons for the “blurred” appearance of the LH-ring and absence of any subdivision in the reaction centre are discussed along with strategies aimed at obtaining a more detailed model of the molecular architecture of the photosynthetic membranes.
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  • 29
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    Archives of microbiology 135 (1983), S. 25-29 
    ISSN: 1432-072X
    Keywords: Electron microscopy ; Euglena mutabilis ; Flagellate ; Photomovement ; Photoreceptor ; Phototaxis ; Single-cell analysis ; Videomicroscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Due to the lack of an emergent flagellum the green flagellate Euglena mutabilis is restricted to gliding motility. During forward movement, the organisms orient positive phototactically in the presence of a suitable light stimulus. The cell contains both a stigma and a paraflagellar body which differ in shape and size from the organelles found in E. gracilis. The degree of orientation in white light follows an optimum curve with a maximum at about 100 lx. The spectral sensitivity shows a number of prominent peaks in the blue and green regions and extends well into the red region of the visible spectrum. Since the cell does not rotate during locomotion a periodic shading mechanism cannot account for phototactic orientation. Thus, phototaxis in the related species, E. gracilis and E. mutabilis differ in their photoreceptor molecules, their sensory transduction chains and their strategies of light direction detection.
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  • 30
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    Journal of cancer research and clinical oncology 105 (1983), S. 285-291 
    ISSN: 1432-1335
    Keywords: Borderline lesion ; Severe dysplasia ; Gastric precancerosis ; Electron microscopy ; Morphometric analysis ; Bleb formation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary The “borderline lesion” of the stomach (severe dysplasia of the protruded type) is nowadays considered to be a true precancerous lesion. Histologically, this lesion is characterized by a proliferation in the area of the glandular neck, combined with severe cellular atypia. Investigation by means of transmission electron microscopy reveals the structure of these cells to be very similar to the structure of cells of an intestinal-cell-type carcinoma of the stomach. In addition to signs for a loss of differentiation of the cells, such as the absence of rough-surfaced endoplasmatic reticulum, mucin granules, and of the polarity of the cells, remarkably frequently luminal bulges and “blebs” developed to various extents can be detected. Morphometric analysis is delineating the tendency of structural features of the borderline lesion to develop toward the gastric cancer cell. These irregularities might be expressions of the beginning of expansive growth and signs pointing to differentiation into malignant neoplasia.
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  • 31
    ISSN: 1432-2307
    Keywords: Cystitis ; Electron microscopy ; Vasculitis ; Elastic tissue ; Autoimmune diseases
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary Bladder vessel walls of 20 patients with interstitial cystitis were studied by the electron microscope. 14 (70%) had severe endothelial injury. 10 (50%) showed injured smooth muscle cells. Odd basement membrane proliferations and disruptions were seen. Clusters of microfibrils about 10 nm in diameter and numerous partially membrane-bound vesicles of 100–600 nm with granular or tiny vesicular content (“granulovesicular bodies”) were also seen. Intercellular junctions of endothelial cells were open and there was emigration of polymorphonuclear leucocytes and platelets. The findings show pronounced vascular injury to have taken place, with neoformation of elastic tissue. It is suggested that the injury is immunologically mediated and that particularly those clusters of connective tissue microfibrils not yet covered by an amorphous elastin component may be involved in the pathogenesis of this disease.
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  • 32
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    Virchows Archiv 401 (1983), S. 109-128 
    ISSN: 1432-2307
    Keywords: Clear-cell sarcoma ; Electron microscopy ; Immunohistochemistry ; Neural crest ; S-100 protein
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Summary A clinico-pathological, light microscopic and immunohistochemical study of 15 clear-cell sarcomas, with an ultrastructural analysis of 6 of the tumors, is presented. The tumors showed a strong predilection for tendons and aponeuroses of the extremities in predominantly young and middle-aged people. The clinical setting, course and light microscopic appearance agree well with the original description by Enzinger (1965). Nine of the 15 patients developed metastases, most of them including lymph nodes, and 8 of the patients had died at the time of follow-up (median follow-up time 4.8 years). Reducing pigment was demonstrated within the cells of 2 tumors. Ultrastructurally the 6 tumors studied had a uniform appearance with characteristically rounded or oval tumor cells with a single nucleus containing one or two very prominent nucleoli, a light-staining cytoplasm with a moderate amount of organelles and a variable content of glycogen. Polymorphic melanosomes were seen in the cells of one of the tumors. External laminas enclosed groups of tumor cells and invested parts of individual tumor cells. With immunoperoxidase analysis for S-100 protein positive staining was observed in the vast majority of the tumor cells of all 15 clear-cell sarcomas. Metastases appearing in 9 of the 15 cases showed positive staining for S-100 protein. There was a strong staining of the cytoplasm and generally a weak and varying staining of nuclei. The immunohistochemical and electron microscopic findings indicate that clear-cell sarcoma is a homogenous entity among soft tissue sarcomas, of probable neural crest derivation.
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  • 33
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    Cell & tissue research 234 (1983), S. 469-496 
    ISSN: 1432-0878
    Keywords: Bone marrow (human) ; Neutrophil granulocyte ; Granules ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary Bone marrow from hematologically healthy adults was exposed to a number of fixation procedures for investigation of the heterogeneity of the granule population in neutrophil granulocytes at the ultrastructural level. Four main cell stages were distinguished: early promyelocyte, late promyelocyte, myelocyte, and mature neutrophil granulocyte and described separately; metamyelocytes and band-form or stab cells are described together. The characteristic changes in the cytoplasm during myelopoiesis were analysed quantitatively. Special attention was given to the development of the granule population. Three types of granule arise in successive cell stages: granules which develop a sub-structure in the matrix (nucleated granules) are formed in early promyelocytes, granules with a homogeneous electron-dense matrix (azurophil granules) in late promyelocytes, and granules with a less electron-dense matrix (specific granules) in myelocytes. The three types of granule remain present during myelopoiesis. The best results in distinguishing the granule types were obtained by prefixation either in 0.1% glutaraldehyde or in 1.5% glutaraldehyde followed by washing in phosphate-buffered Ringer solution to which aminotriazole had been added. Granule counts revealed for the mature neutrophil a total number of granules of about 220 per ultrathin section. This population of granules is composed of about 12% nucleated, 11% azurophil, and 77% specific granules. When our previous findings are taken into account, the existence of three successively formed and morphologically distinguishable types of granule in heterophil (neutrophil) granulocytes has been demonstrated for three mammalian species: the guinea pig, the rat, and man. A separate term for the early promyelocyte stage is proposed: eomyelocyte.
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  • 34
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    Cell & tissue research 234 (1983), S. 579-593 
    ISSN: 1432-0878
    Keywords: Rods ; Cones ; Retina ; Bullfrog ; Synapse ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary Lumps of electron-dense material were observed in synaptic clefts associated with all types of photoreceptors, in the vicinity of the synaptic ribbons, in the retinae of dark-adapted frogs. Frogs were reared under a cyclic illumination (light on at 8:00; light off at 20:00) and then exposed to one of two courses of dark adaptation: one started from 11:00 in the morning, and the other started from 20:00 in the evening. The synaptic clefts of red rods became wider at some places where spherical or polygonal lumps of dense material were accumulated. The frequency and sectional area of the lumps increased faster for the first hour in the regime starting from 20:00 than in the regime starting from 11:00, then they reached the similar saturation levels of about 0.6 (per ribbon) and 1.6 to 1.8×104 (nm2) in both the regimes. In greenrod synapses, plate-shaped lumps of dense material were present in synaptic clefts and interspaces between the processes of second-order neurons. In cone synapses at the end of about 1 h darkness, the frequency and area of the lumps reached maximum values of about 0.12 (per ribbon) and 9×103 (nm2) in the regime starting from 11:00 and, about 0.08 (per ribbon) and 4 × 103 (nm2) in the regime starting from 20:00. On exposure to light, the dense material abruptly disappeared from all types of photoreceptor synaptic clefts. Large dense-core vesicles, occasionally observed in light-adapted rod photoreceptor terminals, seem to participate in exocytosis of the dense material. The number of dense-core vesicles per synaptic ribbon in a terminal was about 0.55 at the end of 3 h light in the morning and about 1.28 at the end of 12 h light in the evening. The increased number of dense-core vesicles during the daytime may contribute to the faster accumulation of dense material in the synaptic clefts. Although the chemical identification or the functional significance of the electron-dense material remains unknown, it is interesting that this material showed a rise and fall in response to darkness and illumination. Also the fact that this material is clearly visible will be helpful for future analysis of frog photoreceptor synapses.
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  • 35
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    Cell & tissue research 232 (1983), S. 593-600 
    ISSN: 1432-0878
    Keywords: Peritrophic membrane ; Insect ; Microvilli ; Electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary A double plasma membrane (DPM) surrounding intestinal microvilli of the migratory milkweed bug, Oncopeltus fasciatus, is described. Mutant and wild types of the phytophagous insect have been studied by conventional SEM and TEM procedures with the use of membrane-enhancing staining methods. Longitudinal and transverse sections revealed a DPM surrounding microvilli and continuing over the apical portions of the intestinal cell. The outer membrane of the DPM contributes to an intestinal lining or peritrophic membrane (PTM), which apparently accumulates in layers. SEM studies reveal a rugose intestinal surface and complete PTM in both starved and fed insects. Only rarely are exposed microvilli seen by SEM. SEM examinations also enable the observation of numerous blebs on the luminal side of the PTM apparently held in position by a neck-like attachment and apparently derived from the outer membrane of the DPM. Preliminary TEM studies of microvilli revealed unique microvesicle-like structures, lying just inside the inner membrane of the DPM, which may be of membrane origin based on their typical trilaminar appearance after en bloc staining with uranyl acetate. Highly ordered microfilaments were observed to occupy the most central aspect of the microvilli.
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  • 36
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    Cell & tissue research 234 (1983), S. 125-134 
    ISSN: 1432-0878
    Keywords: Vasopressin ; Immunocytochemistry ; Electron microscopy ; Hypothalamus ; Rat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary Vasopressin-containing neurons, identified by immunocytochemistry, are located predominantly in the posterior magnocellular division of the paraventricular nucleus of the rat hypothalamus. By electron microscopy, the immunoreaction product is seen within the cell bodies and neuronal processes. In the perikarya and dendritic processes, the immunoreactive material is associated primarily with neurosecretory granules. Axonal processes, identified by their content of microtubules and accumulation of neurosecretory granules, show the immunoreaction product in association with both of these organelles. Afferent axo-dendritic, axo-somatic and putative axo-axonic synapses with immunostained vasopressinergic neurons can be identified. The presynaptic profiles do not contain immunoreactive material. This study contributes to the ultrastructural characterization of vasopressinergic neurons in the paraventricular nucleus and of their afferent synaptic input.
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  • 37
    ISSN: 1432-0878
    Keywords: Dictyosome-like structures ; Golgi apparatus ; Phosphatidylcholine ; Laminated figures ; Electron microscopy ; Guinea pig
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary Dictyosome-like structures (DLS) of guinea pig spermatocytes, when prefixed in mixtures of glutaraldehyde and tannic acid, exhibited laminated figures with a repeating periodicity of about 4.5 nm in the spaces between DLS saccules or in association with the surfaces of the DLS saccules. These laminated figures were similar to those figures derived from saturated lipids in other tissues. Alternatively, spaces between saccules were collapsed leaving only thin, electron-dense material separating adjacent saccules. These changes were not observed when the DLS were prefixed in glutaraldehyde before exposure to tannic acid. The presence of laminated figures following fixation with tannic acid and osmium tetroxide suggests that saturated lipids are present in, or associated with, the intersaccular regions of the DLS. The distribution of laminated figures in other membrane structures was not affected by post fixation with tannic acid nor were laminated figures comparable to those of the DLS observed between cisternae of the Golgi apparatus. These results support previous conclusions that DLS are distinct from Golgi apparatus and are a unique component of the germ cell cytoplasm.
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  • 38
    ISSN: 1615-6102
    Keywords: Digestion ; Membrane flow ; Electron microscopy ; Sarcodina ; Actinophrys sol
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The digestion of food in the heliozoonActinophrys sol is characterized by several distinct membrane events. Initially, extrusomes expand and fuse with each other and with the plasma membrane providing the membrane for the nascent food vacuole. During this process a—presumably lytic—material is secreted. After complete forming of the food vacuole a second type of vesicles fuses with it, whereupon usually lysis of the prey occurs. After denaturation and coagulation of the food, fluid is removed from the food vacuole. This process is accompanied by a high cytotic activity around the periphery of the food vacuole. Following this step, the perinuclear Golgi region shows an active appearance and numerous lysosomes fuse with the food vacuole. In consequence of this the food is degradated. The food vacuole shrinks continuously. Simultaneously vesicles filled with the digested material pinch off from the food vacuole, the content of which shows a more and more condensed mass of undigestible material. The undigestible residues are defecated eventually. The process of digestion is accompanied by an increase in volume and number of electron lucent cytoplasmic vacuoles. These vacuoles gradually become filled with a filamentous material starting with the vacuoles in the cell periphery. As the digestion continues, the vacuolar contents become condensed successively. Synchroneously the vacuoles move towards the cell center. After completion of the digestion, the cytoplasmic vacuoles decrease in volume and number and do not show any longer electron dense contents.
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  • 39
    ISSN: 1615-6102
    Keywords: Anacystis nidulans ; Cyanobacterium ; Electron microscopy ; Freeze-fracmres ; Thylakoid degradation ; Ultrathin-sections
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Photooxidative bleaching of the CyanobacteriumAnacystis nidulans was studied by electron microscopic investigation of both freezefractured and thin-sectioned samples. During bleaching four consecutive phases in degradation of photosynthetic membranes (thylakoids) could be characterized: 1. No ultrastructural changes until photosystem II activity is lost. 2. Derangement of characteristic arrangement of thylakoids. 3. Thylakoids visible only in thin-sectioned but not in freeze-fractured samples. 4. Completely bleached cells, only traces in place of former thylakoids visible in thinsectioned samples. Bleaching did not cause lysis of the cells showing that the cytoplasmic membrane was not damaged. Polyhedral bodies also were still detectable in bleached cells.
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  • 40
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    Protoplasma 116 (1983), S. 198-200 
    ISSN: 1615-6102
    Keywords: Chromosome isolation ; Electron microscopy ; Vicia faba ; Vicia narbonensis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Using a formalin fixation technique whole chromosomes from root tips ofVicia species were isolated into a buffer solution. Combining this technique with the use of a set of reciprocal translocations available for this species—Vicia faba— allowed each member of the karyotype to be isolated and identified. Such isolated chromosomes can be used for optical microscopy or for either transmission or scanning electron microscopy where critical point drying clearly reveals chromatin fibre.
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  • 41
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    Protoplasma 116 (1983), S. 209-212 
    ISSN: 1615-6102
    Keywords: Parapharyngeal mass ; Electron microscopy ; Cytochemistry ; Electron microprobe X-ray analysis ; Ciliate ; Homalozoon vermiculare
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The structure and elemental composition of the granules which make up the parapharyngeal mass of the ciliateHomalozoon vermiculare are analyzed. The mass is made up of two kinds of granules. One is not membrane-bounded and is composed of paraglycogen. The second type is comprised of concentric lamellae. It is rich in magnesium, phosphorus, potassium, and calcium. These results do not support the contention that the granules are directly involved in the process of food vacuole formation. The role of the parapharyngeal mass remains obscure.
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  • 42
    ISSN: 1615-6102
    Keywords: Cell walls ; Electron microscopy ; Moisture ; Plastic embedding ; Seeds
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Aqueous fixatives caused dry seed tissues to swell; mashed peanuts, crushed to remove oil, swelled even more. Use of anhydrous, organic solvents as vehicles for fixatives enabled maintenance of dimensional stability during fixation of dry seed tissues; even crushed seed tissue did not swell significantly when processed anhydrously. However, anhydrously processed specimens proved difficult to section. The difficulty was due to imperfect permeation of plastic into the seed tissues during embedding. An explanation of why anhydrously processed dry seed tissues are so difficult to embed in plastic is offered.
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  • 43
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    International Journal of Quantum Chemistry 23 (1983), S. v 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 44
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    International Journal of Quantum Chemistry 23 (1983), S. 27-45 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A method has been developed to analyzed the bond and current correlation structures of a molecular many-electron wave function. It is shown that the second order density matrix contains information about the bond and current correlations in its off-diagonal components with respect to the indices of orbital basis functions. We break down the off-diagonal correlation functions into five kinds: charge, spin scalar, spin quadrupole, charge spin, and spin polar correlation functions. For a real wave function, the four correlation functions, except for the spin polar one, have only symmetric-symmetric and antisymmetric-antisymmetric components. The former components give site-bond and bond-bond correlations of charges and spins, while the latter components give current-current correlations of charges and spins. The spin polar correlation function has only symmetric-antisymmetric components that give site-current and bond-current correlations of spins. The five off-diagonal correlation functions are expressed in terms of the off-diagonal components of the second order density matrix. The linked off-diagonal correlation functions are defined in that they give dynamical bond and current correlations. The method is applied to the analyses of the bond and current correlations in the low lying exact eigenstates of the PPP Hamiltonian of benzene.
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  • 45
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    International Journal of Quantum Chemistry 23 (1983), S. 115-125 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This work amalgamates some basic elements defined in the first paper of this series and in related papers with the theory of coupling coefficients for an arbitrary group with the view of generating the Clebsch-Gordan coefficients and V symbols for point symmetry groups. The connection between Clebsch-Gordan coefficients and V symbols is established for an arbitrary group in a form that reduces to the one known for the chain SU(2) ⊃ U(1). The Clebsch-Gordan coefficients and V symbols of any point symmetry group G are shown to be obtainable from Clebsch-Gordan coefficients and \documentclass{article}\pagestyle{empty}\begin{document}$ {\bar f} $\end{document} symbols of the chain SU(2) ⊃ G through the resolving of a system of nonlinear equations.
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  • 46
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    International Journal of Quantum Chemistry 23 (1983), S. 127-133 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nature of the correlation function G(1,2) appearing in the definition of the reduced first order density operator γ′(1,2) = ρ(1)1/2ρ(2)1/2G(1,2) is analyzed. It is shown that when G(1,2) is expanded in terms of plane waves in the context of a single-determinant approximation to the wave function, the correction to the Weizsacker term in the kinetic energy density expression is the Thomas-Fermi term.
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  • 47
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    International Journal of Quantum Chemistry 23 (1983), S. 271-308 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the framework of our theoretical approach of the structure and reactivity of chemical intermediates we have been led to reexamine the concept of stability which is widely used by the experimentalists often without specifying its true meaning. In this work we propose a more general definition of the concept of stabilization energy, namely, \documentclass{article}\pagestyle{empty}\begin{document}$$ SE = \Delta H_a - \Sigma N_{AB} E_{AB} $$\end{document} where ΔHa is the heat of atomization of the species under consideration and the EAB's are standard bond energy terms derived from the heats of atomization of reference compounds. Using experimental heats of formation or semiempirical ones deduced from theoretical heats of reaction of appropriate isodesmic processes, we have calculated the stabilization energies of various types of chemical species: saturated, unsaturated and conjugated molecules, free radicals, carbocations, and carbanions. The results obtained can be rationalized in terms of steric hindrance, angular strain, polar interactions, electron delocalization, and substituent effects. Moreover, we have shown that heats of hydrogenation and bond dissociation energies do not provide accurate information on the thermodynamic stabilization of unsaturated compounds and free radicals, respectively. Among other applications the concept of stabilization energy allowed us to propose a detailed classification of free radicals and to rationalize their reactivity. Considering the particular case of radical recombination reactions we have been able to deduce interesting equations showing the relations between the concept of stabilization energy and other quantities commonly used in chemical physics, namely, the bond cleavage enthalpy [BDE(C—C) if one considers alkane thermolysis], the thermodynamic stability measured by the free enthalpy change of a given reaction, and the kinetic stabilization related to the activation energy of a chosen chemical process \documentclass{article}\pagestyle{empty}\begin{document}$$ \begin{array}{*{20}c} {{\rm BDE}(R - R) = E(R - R) - 2{\rm SE(R}^ \cdot {\rm)} + {\rm SE(R} - R{\rm),}} \\ {\Delta G^0_r 2{\rm SE(}R^ \cdot {\rm)} - {\rm SE(R} - R{\rm)} - E(R - R) - T\Delta S^0,} \\ {E_a (r) = \alpha [ - {\rm BDE(}R - R{\rm)}] + \beta ({\hbox{Evans - Polanyi relation}}),}\\ {E_a (r) = a[2{\rm SE(R}^ \cdot )} - {\rm SE(}R - R{\rm)] + }b{\rm .} \end{array} $$\end{document} This analysis allowed us to give a new interpretation of the adjectives transient, persistent, and stable introduced by Griller and Ingold and to show that the persistence of a radical may be due to other factors than steric ones. In conclusion, the concept of stabilization energy appears to be a good tool for rationalizing the static and dynamic properties of chemical species.
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  • 48
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    International Journal of Quantum Chemistry 23 (1983), S. 319-323 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Two-dimensional fully numerical solutions of the Hartree-Fock problem are reported for the singlet ground states of H-, He, H2, and HeH+. The H2 energy at R = 1.4 a.u. is -1.13362957 a.u.
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  • 49
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    International Journal of Quantum Chemistry 23 (1983), S. vii 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 50
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    International Journal of Quantum Chemistry 23 (1983), S. 399-404 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, some operator endomorphisms which give rise to conditions for N representability of pth order density matrices are presented.
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  • 51
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    International Journal of Quantum Chemistry 23 (1983), S. 425-436 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A simple analysis of the bonding between the d orbitals in binuclear complexes of chromium indicate that the usual multiple bond picture used to describe these systems is incomplete. This analysis is fairly general and depends only on the symmetry of these complexes and the rather weak coupling between the 3d orbitals on the two metal centers. A series of INDO calculations on Cr2Cl8-4 and Cr2(CH3)8-4 are reported, and suggest that the dominant description of the bonding is one of two Cr atoms antiferromagnetically coupled. Although this description properly accounts for the eclipsed versus staggered conformations found for these systems, the calculated bond length is too long. An analysis of the components of the wave function suggests that the role of multiple bonded structures (configurations) may be small but is important in its influence in shifting the very flat potential energy surfaces to shorter Cr—Cr distances.
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  • 52
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    International Journal of Quantum Chemistry 23 (1983), S. 491-495 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The interaction energies of proton with ethylene and substituted ethylenes in a positive bridged ion have been calculated by ab initio MO method with STO-3G basis set, and the energies were further decomposed according to decomposition scheme proposed by Kitaura and Morokuma [Int. J. Quantum Chem. 10, 325 (1976)].
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  • 53
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Correlation corrections to coupled Hartree-Fock (CHF) static dipole polarizabilities and dipole moment of the HF molecule are calculated using third-order Rayleigh-Schrödinger perturbation theory with Møller-Plesset partitioning (RSMP) in a finite-field procedure. Computations are also made for the dipole moment and polarizability derivatives at the equilibrium internuclear separation. Three different basis sets using contracted Gaussian orbitals augmented by field-induced diffuse polarization functions have been employed to investigate the nature of variation of the properties under study, and the importance of field-induced diffuse polarization functions is discussed. [2/1] Padé approximants are used to accelerate the convergence of the properties. The correlated dipole moment and polarizability values are in excellent agreement with the existing theoretical and experimental values. The dipole moment derivative is in perfect agreement with the existing correlated value. However, the polarizability derivatives at SCF and correlated levels differ appreciably from the existing SCF values and represent as improvement.
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  • 54
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    International Journal of Quantum Chemistry 23 (1983), S. 477-481 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The observed proton hyperfine coupling constants of radicals from resorcinol and 2-carboxylic, 5-carboxylic, and 5-methyl resorcinols in acidic and alkaline solution were reproduced by means of the INDO (intermediate neglect of differential overlap) with molecular geometry adjusting method. The bond lengths of C—O were longer in acidic solution than in alkaline solution and the total energies were lower in acidic solution than in alkaline solution. The assignments of the coupling constants of the radicals from resorcinols were |A2| 〉 |A5| in alkaline oxidation and |A2| 〈 |A5| in acidic oxidation.
    Additional Material: 1 Ill.
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  • 55
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    International Journal of Quantum Chemistry 23 (1983), S. 507-516 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the present work, the problem of the determination of the potential energy surface for nonrigid molecules is examined in the case of the double rotation of the methyl groups in acetone. From the symmetry adapted functional form for the potential, the minimum number of configurations to be calculated is deduced in order to have a reliable surface. With this consideration in mind, the potential energy surface of acetone is determined in some Hartree-Fock semiempirical (CNDO/2) and ab initio procedures with different standard basis sets. In addition, ab initio calculations are performed using different sets of floating Gaussian functions in order to introduce some polarization effects in the wave function. Finally, the influence of the electronic correlation effects in the barrier height, and the role of the possible relaxation of the structure during the rotation is discussed.
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  • 56
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    International Journal of Quantum Chemistry 23 (1983), S. 551-560 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Cross sections for energy transfer into many-body systems can be expressed in terms of time-correlation functions (TCFS) of transition operators. A semiclassical version is presented by treating internal motions as quantized and relative motions as classical. The time evolution of internal motions can be calculated in the Heisenberg picture and avoids expansions in target states. The decoupling of fast and slow internal motions is treated and applied to vibrational-rotational decoupling in polyatomic molecules. Results are presented for Li+-CO2 collisions.
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  • 57
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    International Journal of Quantum Chemistry 23 (1983), S. 587-593 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Water chain intervention in the hydrolysis of methyl fluoride and in some tautomeric 1,3 proton transfer reactions has been studied. The results show that in solution the process are neither unimolecular nor bimolecular as in the gas phase, but are multimolecular, where the geometric parameters of the solvent intervene in the reaction coordinate.
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  • 58
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    International Journal of Quantum Chemistry 23 (1983), S. 595-611 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The computational considerations involved in calculating ordinary and rotatory intensities and electronic excitation energies in the random phase approximation (RPA) are examined. We employ a localized orbital formulation in order to analyze the results in terms of local and charge-transfer excitations. Occupied orbitals are localized by the Foster-Boys procedure. The virtual space is transformed into a localized “valence” set that maximizes dipole strengths with the occupied counterparts, and a delocalized remainder. The two-electron integral transformation is performed with an efficient algorithm, based on Diercksen's, that generates only the particle-hole-type integrals required in the RPA. The lowest solutions of the RPA equations are obtained iteratively using a modification of the Davidson-Liu simultaneous vector expansion method. This allows the inclusion of the entire set of particle-hole states supported by a basis set of up to 102 orbitals. Calculations at this level give better excitation energies and intensities than SDCI methods, at substantial savings in computational effort. Comparative timings, computed results and analysis in terms of localized orbitals are given for planar and distorted ethylene using extended atomic orbital bases including diffuse functions. The results for planar ethylene are in excellent agreement with experiment.
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  • 59
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    International Journal of Quantum Chemistry 23 (1983), S. 663-678 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Nonlinear equations are important for the description of dissipative processes and soliton-related phenomena. One of the principal aims of the theory of symmetry breaking in quantum mechanics is to provide a systematic method for introducing interactions which reduce the symmetry of a system. Such a method is applied here to compute the general form of the symmetry-breaking interaction F(x,t, Ψ, Ψ*) for the time-dependent Schrödinger equation in one spatial dimension \documentclass{article}\pagestyle{empty}\begin{document}$$ \left[{\partial _{xx} + 2i\partial_t - 2g_2(t)x^2 - 2g_1(t)x - 2g_0 (t)} \right]\psi (x,t) = F(x,t,\psi,\psi *). $$\end{document} For F = 0, it has been shown that the Lie algebra of space-time invariances of this equation is S1 = s1 (2,IR)□w1, the Schrödinger algebra. Following the method of Boyer, Sharp, and Winternitz, all conjugacy classes of subalgebras of S1 are given. For each subalgebra, the most general form of the interaction term F(x,t, Ψ, ψ*) is constructed. The potential F then reduces the symmetry from S1 to the considered subalgebra. Furthermore, the one-dimensional subalgebras of S1 obtained above partition S1 into orbits of operators. To each orbit there corresponds a coordinate system in which the above equation separates variables. A partial resolution of the solutions of the above equation has been obtained by exploiting this relation. The algebraic approach to symmetry breaking yields a rich variety of interaction terms F, which appear to generalize the nonlinear Schrödinger-Langevin-Kostin equation for nonconservative systems and the so-called nonlinear Schrödinger equation. A criterion in terms of the existence or nonexistence of Bäcklund transformations is conjectured in order to distinguish between dissipative and soliton equations.
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  • 60
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    International Journal of Quantum Chemistry 23 (1983), S. 723-728 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Calculating the electrostatic potential around the Ser-His-Asp catalytic triad in serine proteinases the very important substituent effect of the buried aspartate is revealed. It is found that the strong Coulomb field of this distant but charged side chain considerably enhances the nucleophilicity of the active serine hydroxyl group. The interpretation of the vital importance of aspartate may replace the “charge-relay” hypothesis which seems to be disproved in the light of recent experiments.
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  • 61
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    International Journal of Quantum Chemistry 23 (1983) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 62
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    International Journal of Quantum Chemistry 23 (1983), S. 789-809 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Effective solutions for two difficulties which may be present in MCSCF calculation are discussed: (i) We show how the large configuration state function state expansion case may be handled simply and effectively without the introduction of extraneous projection operators or Lagrange multipliers; (ii) we present a simplified two-electron integral transformation procedure which significantly reduces the operation count (and hence computational efficiency is increased) for second order and particularly for third order MCSCF procedures. The procedures we introduce use some freedom available in the orthogonal complement Cl space and the virtual orbital space to simplify MCSCF calculations.
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  • 63
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    International Journal of Quantum Chemistry 23 (1983), S. 847-854 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A modified scheme for SCF interaction energy decomposition has been proposed where the nonphysical basis set superposition error (BSSE) has been corrected by means of the counterpoise method. A new procedure to separate the exchange and induction energy terms free of nonphysical BSSE has been tested in the case of the H2O dimer. The first order BSSE appears to be non-negligible for strong hydrogen bonded complexes. In addition the scheme allows separation of the long-controversial charge-transfer contribution within the induction term, which has been considerably overestimated in previous studies.
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  • 64
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    International Journal of Quantum Chemistry 23 (1983), S. 887-890 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The carbene reaction 1CH2 + C2H6 was studied with the semiempirical method SINDO 1. The pertinent transition states and products were obtained by geometry optimization on a CI surface. We find the insertion reaction forming C3H8 greatly favored compared to the double insertion leading to CH4 + C2H4. The result is qualitatively the same for the reaction of the two possible intermediate radicals CH3 and C2H5. The geometries and energies of all transition states are presented.
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  • 65
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    International Journal of Quantum Chemistry 23 (1983), S. 953-957 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Exact computer-generated formulas can be produced for each term of an infinite series that gives the value of three-center Coulomb integrals over Slater-type orbitals of the s-type with equal screening constants. As a specific example, the Coulomb energy of an equilateral triangular arrangement of all 1s orbitals is calculated using seven terms of an infinite expansion to obtain an answer comparable to earlier work in elliptic coordinates. Generalization to all three-center cases of this implementation of the Löwdin α-function method is straightforward.
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  • 66
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Hartree-Bogoliubov-Valatin (HBV) theory may be implemented with Lipkin Hamiltonians to obtain self-consistent BCS wave functions which describe bond formation and dissociation. These wave functions are in turn vacuua for Nambu's representation of Feynman-Dyson-Goldstone diagrammatic perturbation theory, and hence provide suitable references for the many-body treatment of correlation. Exact SCF solutions of the HBV equations are equivalent to special even-replacement MC-SCF solutions. The latter are similar to generalized valence bond theory, and require one Fock operator for each one-particle shell. The commutative coupling case of HBV theory is realized when the number-conserving renormalized one-body and number-nonconserving pairing operators commute. In this case, a set of orbital equations which involves a single Fock operator may be solved. Since this could prove to be a significant simplification for large systems, the commutative coupling and exact solutions are compared here for the fragmentation of H2 and F2. Results suggest that commutative coupling orbitals will be useful for the aforementioned many-body theory.
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    International Journal of Quantum Chemistry 23 (1983), S. 891-904 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A MNDO study of molecular geometries, enthalpies, formation, atomization, bond separation, and hydrogenation of a series of unsaturated boron-nitrogen compounds, linear with two and three members and cyclic with three, four, five, and six members are presented. For all these molecules, MNDO calculations are in excellent agreement with available ab initio calculations or experimental data. The high rotational barrier in aminoborane H2BNH2, 30.6 kcal/mol, and the length of bond in iminoborane HBNH, 1.183 Å, imply strong double and triple BN bond character in these two molecules. In the odd membered heterocycles, examination of the molecular geometries and energies of equilibrium states shows that in all cases, the stability of the compounds grows with the number of boron atoms and decreases with that of the nitrogen atoms. Moreover, compared study of the two BN-fulvenes with their homologous hydrocarbon shows that only BN (BB)-fulvene has a polyenic structure similar to that of fulvene.
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  • 68
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    International Journal of Quantum Chemistry 23 (1983), S. 959-971 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The linear, quadratic, and cubic response of a multiconfigurational Hartree-Fock state to a time independent one-electron perturbation has been derived. A comparison between the exact response functions as obtained from Rayleigh-Schrödinger perturbation theory and the multiconfigurational Hartree-Fock response functions allows a identification of matrix elements of the perturbation operator between the ground and excited states and between excited states. We discuss some ambiguities which result from such an identification.
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  • 69
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    International Journal of Quantum Chemistry 23 (1983), S. 991-998 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Monte Carlo simulations in the isothermal-isobaric ensemble for the α phase of solid N2 have been carried out with two different pair potentials obtained from ab initio quantum chemical calculations. Comparison is made with data obtained from empirical potentials as well as with experimental data, and in general, the agreement with experiment is found to be good. It is also found that the differences between experiment and theory can largely be attributed to correlation effects, not considered in the quantum mechanical calculations of the pair potential.
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  • 70
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    International Journal of Quantum Chemistry 23 (1983), S. 1047-1056 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The AGP wave function is used to describe the ground state potential energy curves of Li2 and CH+. Moderate size basis sets are used. The computational aspects of the AGP optimization are discussed and the nature of the AGP wave function versus internuclear separation is examined.
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  • 71
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    International Journal of Quantum Chemistry 23 (1983), S. 1155-1163 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Doped semiconductors with shallow impurities provide an ideal situation to study a collection of hydrogenlike atoms under controllable experimental conditions. We present the results of recent cluster calculation on the electronic properties of such systems.
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  • 72
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    International Journal of Quantum Chemistry 23 (1983), S. 1283-1293 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Experimental base stacking and hydrogen bonding enthalpies, as determined from double stranded DNA melting studies, are compared with theoretical calculations of interactions between the respective DNA interconstituent components. Comparisons are made in relation to the differences in magnitudes, sequence dependent spreads, and trends. It is shown that the use of an effective dielectric constant reconciles the differences between the experimental and theoretical values. Suggestions are made for calibration of potential functions suitable for nucleic acid conformational analysis.
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  • 73
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    International Journal of Quantum Chemistry 23 (1983), S. 1317-1353 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An overview is given here of band structure calculations on the fourth and fifth group transition metal monocarbides, mononitrides, and monoxides, published since the review article by Calais [J.-L. Calais, Adv. Phys. 26, 847 (1977)]. Furthermore, the relations of three categories of experimental properties, which allow insight into the electronic structure of the above mentioned compounds, and the results of band structure calculations are discussed. Theoretical predictions are compared with experimental findings. The considered experimental properties are valence band photoemission spectra, valence band x-ray emission spectra, and optical properties.
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  • 74
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    International Journal of Quantum Chemistry 23 (1983), S. 1433-1439 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Conformational energy calculations at the PCILO level of approximation were performed on β(1 → 3) linked disaccharide consisting of N-acetylgalactosamine and galactose of the Forssman antigen to examine the side group conformations and their influence on the mutual orientations of the two pyranosyl rings. Two low energy regions for the glycosidic bond conformation have been located in the grid search using classical potential functions. The PCILO energy minimizations were then carried out in each of these regions. The preferred orientations of the nonreducing pyranosyl ring relative to the reducing ring were found to be in agreement with the available x-ray results. Moreover, the orientations of groups attached to the anomeric carbons were in good accordance with the requirements of the exo-anomeric effect.
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    International Journal of Quantum Chemistry 23 (1983), S. 1451-1461 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The molecular electrostatic potential of the triple helix poly(dT)·tpoly(dA)·poly(dT) is calculated, and the results are examined in relation to those obtained for its component double and single helical parts. For the double helix presenting the standard Watson-Crick hydrogen bonds, the deepest potentials are formed on the side of the major groove, a situation similar to that observed in the A-DNA duplex. For the double helix presenting Hoogsteen-type hydrogen bonds the deepest potentials lie in the major groove, on the side of the pyrimidine strand. In the triple helix the deepest potentials are located in the major groove in a narrow zone over the thymine bases of the Watson-Crick pair.
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  • 76
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    International Journal of Quantum Chemistry 23 (1983), S. 1363-1383 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Interacting stereo-irregular chains of hydrogen atoms, which simulate the topological structure of many conducting polymers, are generated by a computer and solved numerically with the unrestricted Hartree-Fock method with a modified spin polarized potential. The electron localization is investigated, and a mechanism for the interchain tunneling is discovered. Local antiferromagnetic ordering is derived which may explain the AF behavior observed in some conducting polymers.
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  • 77
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    International Journal of Quantum Chemistry 23 (1983), S. 1441-1450 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The glycan moiety of the bacterial peptidoglycan consists of alternatingly β(1 → 4) linked disaccharides of N-acetylglucosamine (NAG) and its 3-O-D lactic derivative, N-acetyl β-D-muramic acid (NAM). PCILO conformational energy calculations have been carried out for NAG-NAM and NAM-NAG disaccharides to see whether or not the glycan strands possess a chitinlike structure as suggested by earlier workers. In agrement with recent experimental findings, the present results also suggest that the chitinlike structure is energetically disallowed. Furthermore, the bulky N-acetyl substituents at C2 positions of the two sugar molecules are found to be relatively less important in stabilizing mutual orientations of the two pyranosyl rings.
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    International Journal of Quantum Chemistry 23 (1983), S. 1479-1492 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The MO theory of structural polyhedrons is one of the basic subjects closely related to the bonding theory of complex compounds and clusters. A series of valuable papers on this subject have been contributed by Hoffman, Wade, King, and Lauher et al. A method called “group overlap method” for constructing the symmetry orbitals and for calculating the group overlap integrals is proposed. It is hoped that the group overlap method may be used for the qualitative and quantitative MO study of structural polyhedrons.
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  • 79
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Quantum chemical ab initio MODPOT/VRDDO calculations have been carried out on the following aminonitrobenzenes for which crystal structures had been determined experimentally: 4-nitroaniline; N,N-dimethyl-p-nitroaniline; 2,4,6-trinitroaniline; 1,3-diamino-2,4,6-trinitrobenzene (DATB - Form I); 1,3,5-triamino-2,4,6-trinitrobenzene (TATB); 2,3,4,6-tetranitroaniline; N-methyl-N,2,4,6-tetranitroaniline (Tetryl); and N-(β,β,β-trifluoroethyl)-N,2,4,6-tetranitroaniline. These quantum chemical calculations were performed on the molecules in their conformations as found in their crystal structures. The calculations were carried out with our own ab initio programs which also incorporate as options several desirable features for calculations on large molecules: ab initio effective core model potentials (MODPOT) which enable calculations of valence electrons only explicitly, yet accurately, and a charge conserving integral prescreening evaluation (which we named VRDDO-variable retention of diatomic differential overlap) especially effective for spatially extended molecules. Aminonitrobenzenes are especially interesting since there are inherent intramolecular ring distortions and deviations from planarity and intramolecular hydrogen bonds as well as intermolecular hydrogen bonds causing further deviations from planarity. The theoretical indices resulting from the quantum chemical calculations are relevant to a number of properties and behavioral characteristics of these molecules, both intramolecular and intermolecular. The charges on the atoms [from the gross atomic populations (GAP's)] are needed for calculation of the atomic multipole-atomic multipole electrostatic contributions (a dominant factor) to the intermolecular interaction energies. These electrostatic interaction energies are part of the input necessary for calculations on the crystal packing and densities of these molecules. These GAP's are also of value in interpreting the experimental photoelectron and ESCA spectra of these molecules. The total overlap populations (TOP's) between atoms are related to the inherent bond strengths and can serve as a quantitative replacement for the old empirical bond length-bond order-bond energy relationship still used by explosives chemists to identify the “target bonds” (the weakest bonds). The TOP's are of considerable value in predicting and tracing initiation and subsequent steps of explosive phenomena. The molecular orbital energies of the lowest unoccupied orbitals are of interest since nitroexplosives have been implicated in testicular toxicity and the initial metabolic activation appears to proceed through a one-electron reduction of the nitroexplosive.
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  • 80
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    International Journal of Quantum Chemistry 23 (1983), S. 1571-1577 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An analysis of the leading effects of a propagator approach to the calculation of resonance energies is presented. By comparison with ΔSCF results, a simple approximation formula has been developed which contains the main features of the VN-1 potential option and the diagonal Tamm-Dancoff approximation. This result is expected to be a useful guide for further refinements of the many-body aspects of the theory.
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    International Journal of Quantum Chemistry 23 (1983), S. 1643-1652 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electron density and the molecular electrostatic potential of the β-carbolines are studied using ab initio STO-3G wave functions. The analysis was done from the point of view of a previous model built with monoamine oxidase substrates and irreversible inhibitors. The results confirm the usefulness of the model and make it possible to propose new precision to the molecular electrostatic potential patterns needed to have monoamine oxidase inhibitory activity.
    Additional Material: 11 Ill.
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  • 82
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 83
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    International Journal of Quantum Chemistry 23 (1983), S. 1695-1705 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The transition energy and geometry of the lowest excited (nπ*) singlet and triplet states of CO, CS, HNO, H2CO, HFCO, and F2CO molecules are calculated by CNDO/S and CNDO/2-VN-1 potential methods, and the results are compared with those of experimental and ab initio theoretical studies, wherever available. In the calculation of the vertical transition energy, the performance of the CNDO/S method is seen to be generally more satisfactory than that of the CNDO/2-VN-1 potential method, while the reverse is true for the excited-state geometry. The CNDO/S method as such fails to describe the geometry of the excited state, but a combined version (CNDO/S-2) of CNDO/S and CNDO/2, as well as the CNDO/2-VN-1 potential method is fairly successful in this regard.
    Additional Material: 1 Ill.
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  • 84
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    International Journal of Quantum Chemistry 23 (1983), S. 1753-1765 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: On the basis of a high-quality LCAO MO SCF calculation, covalency versus ionicity of a Co-F bond in the CoF6(n-) complexes, where n = 4, 3, and 2, is discussed. The overlap and gross atomic populations, delocalization of certain MOS, and the charge densities in the bond region as well as around F's all indicate that the covalency increases as n decreases or the valency of Co increases in these complexes.
    Additional Material: 5 Ill.
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  • 85
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    International Journal of Quantum Chemistry 23 (1983), S. 1807-1816 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In an n level quantum system there is a relation between each density operator and an element of su (n) Lie algebra. This relation is also established between Cartan's subalgebras and the complete sets of compatible observables. A scalar product is then defined in this algebra in order to introduce orthonormal bases and to simplify many calculations about expectation values of observables. Therefore simple general rules were established which show how to determine (completely or partly), from linearly independent observables, the density operator of the system.
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  • 86
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    International Journal of Quantum Chemistry 23 (1983) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 87
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    International Journal of Quantum Chemistry 23 (1983), S. 1891-1901 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The elastic forward scattering of high-energy electrons from molecules has been studied in the second Born approximation. An integral transformation has been adopted to evaluate the second Born integrals analytically without explicit use of molecular wave functions. In the high-energy limit, the differential cross section for the forward scattering is expressed in terms of electric dipole and quadrupole moments, the second moment of charge distribution with respect to the molecular center, and transition dipole moments. All these quantities are shown to be computable from molecular electron densities in the ground state.
    Additional Material: 1 Tab.
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  • 88
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    International Journal of Quantum Chemistry 23 (1983), S. 1915-1922 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We examine the short-range behavior of the spherically averaged Hartree-Fock exchange charge density by performing a simple Taylor expansion. On the basis of this expansion, a theoretical model is constructed that generates gradient correction terms to the local density approximation for the exchange energy of an inhomogeneous electron gas. In particular, we derive the Xαβ exchange energy functional and a theoretical value for the parameter β. Our value for β agrees well with previous empirical estimates, and with empirical calculations in the present work.
    Additional Material: 1 Tab.
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  • 89
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    International Journal of Quantum Chemistry 23 (1983), S. 1931-1944 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: By the means of gauge invariance of the continuity equation Fick's law of diffusion can be extended to also comprehend the chemical reaction. In the case of first-order reactions a complete set of eigenfunctions is obtained. These solutions provide a tool for pattern recognition in biochemical and biological problems (e.g., formation of chromosome banding). The transport equation, including reactions of second order, exhibits soliton solutions describing the propagation of a kinetic process in a medium (molecular chain, fluids, etc.). A relationship to the soliton solutions of the nonlinear Schrödinger equation and Korteweg-de Vries equation of hydrodynamics is also indicated. The propagation of a reactive process (transition state) occurs in many problems of molecular biology. The Brownian motion of ions undergoing a reaction of first order in a constant magnetic field is also exactly solved.
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  • 90
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    International Journal of Quantum Chemistry 23 (1983), S. 1973-1978 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the study of the ground-state binding energy of atoms, relatively more attention has been paid to the gradient expansion of the kinetic energy term of the Thomas-Fermi-Dirac model than to the gradient expansion of the exchange term of this model. Recently Shih and Shih, Murphy, and Wang have focused on this problem and calculated the first gradient expansion correction to the Dirac exchange term by making use of electron densities constructed from Hartree-Fock wave functions. In previous work, aimed to introduce the shell structure of atoms via a variational procedure using the energy density functional formalism, electron densities have been obtained for the Na atom within the Thomas-Fermi-Dirac model with and without the Weizsäcker and Hodges gradient expansion corrections to the kinetic energy term. In this paper we make use of the respective electron densities and calculate the first gradient expansion corrections to the Dirac exchange term. The results show that, for the Na atom, the magnitude of this correction is about 1% of the magnitude of the total binding energy.
    Additional Material: 2 Tab.
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  • 91
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    International Journal of Quantum Chemistry 24 (1983), S. 25-60 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We discuss how the local convergence of Newton-Raphson and fixed Hessian MCSCF iterative models may be rationalized in terms of a total order of convergence in an error vector and a corresponding error term. We demonstrate that a sequence of N Newton-Raphson iterations has a total order of convergence of 2N and that a sequence of N fixed Hessian iterations has a total order of convergence of N + 1. We derive the error terms of a Newton-Raphson and a fixed Hessian sequence of iterations. We discuss the implementation of the fixed Hessian and the Newton-Raphson approaches both when linear and nonlinear transformations of the variables are carried out. Sample calculations show that insight into the structure of the local convergence of Newton-Raphson and fixed Hessian models can be based on an order of convergence and an error term analysis.
    Additional Material: 1 Ill.
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  • 92
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    International Journal of Quantum Chemistry 24 (1983), S. 113-126 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The description of electron density in solids by quantum theory and by x-ray diffraction experiments should closely coincide. A formalism for describing the electronic structure of single crystals in terms of a density matrix is presented. Iterative equations for calculating the density matrix in a basis of Bloch orbitals using measured crystallographic intensity data are derived. Numerical results are presented. The Bloch orbital formalism explicitly accounts for the mutual interaction of atoms in different unit cells, and is useful for insulators, semiconductors, and metals.
    Additional Material: 2 Tab.
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  • 93
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    International Journal of Quantum Chemistry 24 (1983), S. 135-135 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 94
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    International Journal of Quantum Chemistry 24 (1983), S. 279-306 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Löwdin basis functions are introduced and their permutation symmetry is studied in detail. A simple relation between the Löwdin basis and the orthogonal basis constructed by means of Young-Yamanouchi units is established. Both analytical and recurrence formulas for the overlap integrals of the Löwdin and some relevant auxiliary functions are derived. The symmetry of the overlap matrix of the Löwdin basis functions is briefly discussed.
    Additional Material: 1 Ill.
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  • 95
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The definitive breakdown of the CBO potential picture in consequence of the vibronic coupling of two electronic states is discussed on the basis of our model. The present treatment differs from that given in the literature.
    Additional Material: 2 Ill.
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  • 96
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    International Journal of Quantum Chemistry 24 (1983), S. 353-371 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electrostatic potentials and fields created by the thiol protease, papain, are computed on the surface envelope of the protein and in the region of its active site using a technique based on accurate multipole expansions of the electron density of appropriately chosen subunits. The effect of binding counterions to the protein is considered specifically. The possible role of the “electrostatic environment” in the functioning of the enzyme is discussed and it is found that this environment can favor the proton transfer between Cys 25 and His 159 that is thought to initiate its mode of action, but that the reasons for this appear more complicated than earlier models would suggest.
    Additional Material: 14 Ill.
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  • 97
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    International Journal of Quantum Chemistry 24 (1983), S. 411-423 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The bond length alternation problem in cyclic polyene models as described by the Pariser-Parr-Pople Hamiltonian and an empirical quasiharmonic π-core potential is investigated using the one-parameter alternant molecular orbital (AMO) method. It is shown that in contrast to the unrestricted Hartree-Fock (UHF) results, which lead to symmetric equidistant structures, the one-parameter AMO results yield bond length alternating structures similar to those obtained with the restricted HF approach. The correlation energy recovered by the AMO method is examined for the symmetric polyenes in the whole range of coupling constants for both the Pariser-Parr-Pople and Hubbard Hamiltonians and compared with exact full configuration interaction (FCI) results. For the first member of the cyclic polyene series we also compared the FCI and AMO correlation energies for different nuclear framework distortions. This comparison indicates that in contrast to the UHF results the fraction of the correlation energy recovered by the AMO approach is very uniform over the range of nuclear distortions considered. The AMO results thus strongly indicate the dimerization in the polyenic chains.
    Additional Material: 6 Ill.
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  • 98
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    International Journal of Quantum Chemistry 24 (1983), S. 435-452 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: For most structures (molecules, graphs, lattices) a count of random walks for nonequivalent sites will give different numbers, particularly for walks of many steps. Occasionally one finds the same count of walks for nonequivalent sites. These have been termed “unusual walks” and have been closely examined in the case of trivalent graphs. While it remains to be understood what structural factors are critical, some regularities have been observed and are discussed. Unusual walks within a single structure signal “isospectural” points in a graph. A number of structures possessing unusual walks have been displayed, and a few constructive steps which do not alter the “unusual” characteristics of selected vertices have been indicated.
    Additional Material: 11 Ill.
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  • 99
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    International Journal of Quantum Chemistry 24 (1983), S. 523-526 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Boundaries of electronic energy level sets in the nuclear charge space wZ can be parametrized as single valued functionals for any nuclear geometry of molecules, which property, combined with the general convexity of such level sets, leads to various electronic energy inequalities.
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  • 100
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    International Journal of Quantum Chemistry 24 (1983), S. 593-602 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In connection with the reinterpretation of Hund's multiplicity rules for molecules, a detailed study has been made of the energy differences in the total energy and its components for the triplet and singlet Πu states of the hydrogen molecule and the analogous states of the four- and six-membered hydrogen atom rings. For the hydrogen molecule, both SCF and CI studies indicated that the outer electron is considerably more contracted in the triplet than in the singlet state. In both approximations, the energy difference is dominated for all bond distances of chemical and physical significance by the electron-nuclear attraction component and not by the electron repulsion component as predicted by simple first-order perturbation theory. Although the correlation energy for each of the states is of the same magnitude as the energy differences considered here, the difference of the correlation energies is much smaller. It had little effect on the qualitative differences between these states of the hydrogen molecule. For the four- and six-membered rings, SCF studies were made on the lowest singlet and triplet states where one electron was promoted from the σg to a Πu orbital. Even though the coupled electrons were more delocalized in these cases, the electron repulsion became relatively more important. However in all cases, the lower state had the highest electron repulsion energy and lower electron-nuclear attraction. The triplet state continued to have the more contracted outer open-shell orbital.
    Additional Material: 4 Ill.
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